RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 CLRN3Q8NCR9 226 aa3.76□□□□□ -1.81
UBXN4-208ENST00000490163 GIMAP8Q8ND71 665 aaPredicted RBP3.76□□□□□ -1.81
UBXN4-208ENST00000490163 ENOX1Q8TC92 643 aaKnown RBP3.76□□□□□ -1.81
UBXN4-208ENST00000490163 WDR18Q9BV38 432 aa3.76□□□□□ -1.81
UBXN4-208ENST00000490163 DDX20Q9UHI6 824 aaKnown RBP3.76□□□□□ -1.81
UBXN4-208ENST00000490163 TOP2BQ02880 1626 aa3.75□□□□□ -1.81
UBXN4-208ENST00000490163 CFBP00751 764 aa3.75□□□□□ -1.81
UBXN4-208ENST00000490163 CAPN3P20807 821 aa3.75□□□□□ -1.81
UBXN4-208ENST00000490163 IL6STP40189 918 aaPredicted RBP3.75□□□□□ -1.81
UBXN4-208ENST00000490163 CDK7P50613 346 aa3.75□□□□□ -1.81
UBXN4-208ENST00000490163 AK2P54819 239 aa3.75□□□□□ -1.81
UBXN4-208ENST00000490163 HTRA3P83110 453 aa3.75□□□□□ -1.81
UBXN4-208ENST00000490163 BTKQ06187 659 aa3.75□□□□□ -1.81
UBXN4-208ENST00000490163 EFHBQ8N7U6 833 aa3.75□□□□□ -1.81
UBXN4-208ENST00000490163 NLGN2Q8NFZ4 835 aa3.75□□□□□ -1.81
UBXN4-208ENST00000490163 ZNF507Q8TCN5 953 aa3.75□□□□□ -1.81
UBXN4-208ENST00000490163 ANKS1AQ92625 1134 aa3.75□□□□□ -1.81
UBXN4-208ENST00000490163 NAGPAQ9UK23 515 aa3.75□□□□□ -1.81
UBXN4-208ENST00000490163 CORINQ9Y5Q5 1042 aa3.75□□□□□ -1.81
UBXN4-208ENST00000490163 GLRX3O76003 335 aaKnown RBP3.75□□□□□ -1.81
UBXN4-208ENST00000490163 DDAH1O94760 285 aa3.75□□□□□ -1.81
UBXN4-208ENST00000490163 VDRP11473 427 aa3.75□□□□□ -1.81
UBXN4-208ENST00000490163 COPB2P35606 906 aa3.75□□□□□ -1.81
UBXN4-208ENST00000490163 RAB15P59190 212 aa3.75□□□□□ -1.81
UBXN4-208ENST00000490163 ARHGAP44Q17R89 818 aa3.75□□□□□ -1.81
UBXN4-208ENST00000490163 CCDC174Q6PII3 467 aa3.75□□□□□ -1.81
UBXN4-208ENST00000490163 SMG8Q8ND04 991 aaKnown RBP3.75□□□□□ -1.81
UBXN4-208ENST00000490163 ZMIZ2Q8NF64 920 aa3.75□□□□□ -1.81
UBXN4-208ENST00000490163 ERP27Q96DN0 273 aa3.75□□□□□ -1.81
UBXN4-208ENST00000490163 C16orf92Q96LL3 132 aa3.75□□□□□ -1.81
UBXN4-208ENST00000490163 NELL2Q99435 816 aa3.75□□□□□ -1.81
UBXN4-208ENST00000490163 ZDHHC5Q9C0B5 715 aa3.75□□□□□ -1.81
UBXN4-208ENST00000490163 GP6Q9HCN6 339 aa3.75□□□□□ -1.81
UBXN4-208ENST00000490163 SLC6A14Q9UN76 642 aa3.75□□□□□ -1.81
UBXN4-208ENST00000490163 RASA4BC9J798 803 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 PI4K2BG5E9Z4 385 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 RASA4O43374 803 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 TRAPPC10P48553 1259 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 FAM193AP78312 1265 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 HTRA4P83105 476 aaPredicted RBP3.74□□□□□ -1.81
UBXN4-208ENST00000490163 PKDCCQ504Y2 493 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 LBX2Q6XYB7 198 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 KANSL1Q7Z3B3 1105 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 ZBTB46Q86UZ6 589 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 RNF214Q8ND24 703 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 PPP1R14CQ8TAE6 165 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 RNF141Q8WVD5 230 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 WDR89Q96FK6 387 aaPredicted RBP3.74□□□□□ -1.81
UBXN4-208ENST00000490163 LRFN3Q9BTN0 628 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 TTLL2Q9BWV7 592 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 FOXN3O00409 490 aaPredicted RBP3.74□□□□□ -1.81
UBXN4-208ENST00000490163 AQP7O14520 342 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 ALDH1A1P00352 501 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 FLT3P36888 993 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 IL12RB1P42701 662 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 GPSM2P81274 684 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 MRPS9P82933 396 aaKnown RBP3.74□□□□□ -1.81
UBXN4-208ENST00000490163 SAFB2Q14151 953 aaKnown RBP eCLIP3.74□□□□□ -1.81
UBXN4-208ENST00000490163 KCTD2Q14681 263 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 PCBP2Q15366 365 aaKnown RBP eCLIP3.74□□□□□ -1.81
UBXN4-208ENST00000490163 NBPF9Q3BBW0 867 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 SLC27A3Q5K4L6 730 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 PPP4R3AQ6IN85 833 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 CCDC70Q6NSX1 233 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 CYP4F22Q6NT55 531 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 CC2D1AQ6P1N0 951 aaPredicted RBP3.74□□□□□ -1.81
UBXN4-208ENST00000490163 VSTM5A8MXK1 200 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 M0R2C6 588 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 TPP1O14773 563 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 WDHD1O75717 1129 aaPredicted RBP3.74□□□□□ -1.81
UBXN4-208ENST00000490163 AGXTP21549 392 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 EDNRBP24530 442 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 ZEB1P37275 1124 aaPredicted RBP3.74□□□□□ -1.81
UBXN4-208ENST00000490163 ANO4Q32M45 955 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 FOXD4L6Q3SYB3 417 aaPredicted RBP3.74□□□□□ -1.81
UBXN4-208ENST00000490163 C10orf62Q5T681 223 aaPredicted RBP3.74□□□□□ -1.81
UBXN4-208ENST00000490163 FOXD4L3Q6VB84 417 aaPredicted RBP3.74□□□□□ -1.81
UBXN4-208ENST00000490163 NCAPG2Q86XI2 1143 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 KLHL23Q8NBE8 558 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 CYP2W1Q8TAV3 490 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 DDX54Q8TDD1 881 aaKnown RBP3.74□□□□□ -1.81
UBXN4-208ENST00000490163 EZH1Q92800 747 aaPredicted RBP3.74□□□□□ -1.81
UBXN4-208ENST00000490163 PHKBQ93100 1093 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 PAGR1Q9BTK6 254 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 TMEM120AQ9BXJ8 343 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 HAPLN2Q9GZV7 340 aa3.74□□□□□ -1.81
UBXN4-208ENST00000490163 TARBP1Q13395 1621 aaKnown RBP3.73□□□□□ -1.81
UBXN4-208ENST00000490163 A0A088AWK7 358 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 EPHX1P07099 455 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 ZNF460Q14592 562 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 CCDC96Q2M329 555 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 DIEXFQ68CQ4 756 aaKnown RBP3.73□□□□□ -1.81
UBXN4-208ENST00000490163 DTWD1Q8N5C7 304 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 TMEM145Q8NBT3 493 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 SIMC1Q8NDZ2 872 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 SLC30A5Q8TAD4 765 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 FRS2Q8WU20 508 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 GCC1Q96CN9 775 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 SLC6A18Q96N87 628 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 ABCA5Q8WWZ7 1642 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms