RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 MROH7Q68CQ1 1323 aa22.78■■□□□ 1.24
TNFRSF1B-202ENST00000489921 LOC102724159A0A0B4J2E5 919 aa22.77■■□□□ 1.24
TNFRSF1B-202ENST00000489921 RBM47A0AV96 593 aaKnown RBP22.77■■□□□ 1.24
TNFRSF1B-202ENST00000489921 PTPDC1A2A3K4 754 aa22.77■■□□□ 1.24
TNFRSF1B-202ENST00000489921 RPS6P62753 249 aaKnown RBP22.77■■□□□ 1.24
TNFRSF1B-202ENST00000489921 FPGSQ05932 587 aa22.77■■□□□ 1.24
TNFRSF1B-202ENST00000489921 PWP2Q15269 919 aaKnown RBP22.77■■□□□ 1.24
TNFRSF1B-202ENST00000489921 TTC22Q5TAA0 569 aa22.77■■□□□ 1.24
TNFRSF1B-202ENST00000489921 KIAA1211Q6ZU35 1233 aa22.77■■□□□ 1.24
TNFRSF1B-202ENST00000489921 C16orf59Q7L2K0 433 aa22.77■■□□□ 1.24
TNFRSF1B-202ENST00000489921 SLC17A8Q8NDX2 589 aa22.77■■□□□ 1.24
TNFRSF1B-202ENST00000489921 VTI1AQ96AJ9 217 aa22.77■■□□□ 1.24
TNFRSF1B-202ENST00000489921 ADD3Q9UEY8 706 aaKnown RBP22.77■■□□□ 1.24
TNFRSF1B-202ENST00000489921 EDNRBP24530 442 aa22.76■■□□□ 1.23
TNFRSF1B-202ENST00000489921 CALML3P27482 149 aa22.76■■□□□ 1.23
TNFRSF1B-202ENST00000489921 SMAD3P84022 425 aaKnown RBP22.76■■□□□ 1.23
TNFRSF1B-202ENST00000489921 DUSP28Q4G0W2 176 aa22.76■■□□□ 1.23
TNFRSF1B-202ENST00000489921 MFSD5Q6N075 450 aa22.76■■□□□ 1.23
TNFRSF1B-202ENST00000489921 RNF207Q6ZRF8 634 aa22.76■■□□□ 1.23
TNFRSF1B-202ENST00000489921 IQCA1Q86XH1 822 aa22.76■■□□□ 1.23
TNFRSF1B-202ENST00000489921 FAM161BQ96MY7 647 aa22.76■■□□□ 1.23
TNFRSF1B-202ENST00000489921 IMMTQ16891 758 aaKnown RBP22.75■■□□□ 1.23
TNFRSF1B-202ENST00000489921 CCDC178Q5BJE1 867 aa22.75■■□□□ 1.23
TNFRSF1B-202ENST00000489921 TBC1D5Q92609 795 aa22.75■■□□□ 1.23
TNFRSF1B-202ENST00000489921 AP5M1Q9H0R1 490 aa22.75■■□□□ 1.23
TNFRSF1B-202ENST00000489921 PNMA2Q9UL42 364 aa22.75■■□□□ 1.23
TNFRSF1B-202ENST00000489921 MYH6P13533 1939 aa22.74■■□□□ 1.23
TNFRSF1B-202ENST00000489921 CABYRO75952 493 aa22.74■■□□□ 1.23
TNFRSF1B-202ENST00000489921 ITGA7Q13683 1181 aa22.74■■□□□ 1.23
TNFRSF1B-202ENST00000489921 ADGRF4Q8IZF3 695 aa22.74■■□□□ 1.23
TNFRSF1B-202ENST00000489921 RGS22Q8NE09 1264 aa22.74■■□□□ 1.23
TNFRSF1B-202ENST00000489921 WDR11Q9BZH6 1224 aa22.74■■□□□ 1.23
TNFRSF1B-202ENST00000489921 TTYH1Q9H313 450 aaPredicted RBP22.74■■□□□ 1.23
TNFRSF1B-202ENST00000489921 SEMA6BQ9H3T3 888 aa22.74■■□□□ 1.23
TNFRSF1B-202ENST00000489921 KAT14Q9H8E8 782 aa22.74■■□□□ 1.23
TNFRSF1B-202ENST00000489921 CTNNA3Q9UI47 895 aa22.74■■□□□ 1.23
TNFRSF1B-202ENST00000489921 TNKSO95271 1327 aa22.74■■□□□ 1.23
TNFRSF1B-202ENST00000489921 IRX6P78412 446 aaPredicted RBP22.73■■□□□ 1.23
TNFRSF1B-202ENST00000489921 USH1GQ495M9 461 aa22.73■■□□□ 1.23
TNFRSF1B-202ENST00000489921 ZNF697Q5TEC3 545 aa22.73■■□□□ 1.23
TNFRSF1B-202ENST00000489921 CYB5R4Q7L1T6 521 aa22.73■■□□□ 1.23
TNFRSF1B-202ENST00000489921 RNPC3Q96LT9 517 aaKnown RBP22.73■■□□□ 1.23
TNFRSF1B-202ENST00000489921 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.73■■□□□ 1.23
TNFRSF1B-202ENST00000489921 KRT23Q9C075 422 aa22.73■■□□□ 1.23
TNFRSF1B-202ENST00000489921 CSF2RAP15509 400 aa22.72■■□□□ 1.23
TNFRSF1B-202ENST00000489921 PSMC6P62333 389 aa22.72■■□□□ 1.23
TNFRSF1B-202ENST00000489921 SEC23AQ15436 765 aa22.72■■□□□ 1.23
TNFRSF1B-202ENST00000489921 CDC37Q16543 378 aaPredicted RBP22.72■■□□□ 1.23
TNFRSF1B-202ENST00000489921 DNERQ8NFT8 737 aa22.72■■□□□ 1.23
TNFRSF1B-202ENST00000489921 VCANP13611 3396 aa22.72■■□□□ 1.23
TNFRSF1B-202ENST00000489921 CHMLP26374 656 aa22.71■■□□□ 1.23
TNFRSF1B-202ENST00000489921 PTH1RQ03431 593 aa22.71■■□□□ 1.23
TNFRSF1B-202ENST00000489921 ASPRV1Q53RT3 343 aa22.71■■□□□ 1.23
TNFRSF1B-202ENST00000489921 TMEM240Q5SV17 173 aa22.71■■□□□ 1.23
TNFRSF1B-202ENST00000489921 RASIP1Q5U651 963 aa22.71■■□□□ 1.23
TNFRSF1B-202ENST00000489921 PPP1R12CQ9BZL4 782 aa22.71■■□□□ 1.23
TNFRSF1B-202ENST00000489921 TRPV6Q9H1D0 765 aa22.71■■□□□ 1.23
TNFRSF1B-202ENST00000489921 CNNM2Q9H8M5 875 aa22.71■■□□□ 1.23
TNFRSF1B-202ENST00000489921 JMJD4Q9H9V9 463 aa22.71■■□□□ 1.23
TNFRSF1B-202ENST00000489921 TLR3O15455 904 aaKnown RBP22.7■■□□□ 1.22
TNFRSF1B-202ENST00000489921 ZEB2O60315 1214 aa22.7■■□□□ 1.22
TNFRSF1B-202ENST00000489921 CYP2C18P33260 490 aa22.7■■□□□ 1.22
TNFRSF1B-202ENST00000489921 STAG2Q8N3U4 1231 aa22.7■■□□□ 1.22
TNFRSF1B-202ENST00000489921 CDX2Q99626 313 aaPredicted RBP22.7■■□□□ 1.22
TNFRSF1B-202ENST00000489921 COL20A1Q9P218 1284 aa22.7■■□□□ 1.22
TNFRSF1B-202ENST00000489921 TAF6LQ9Y6J9 622 aa22.7■■□□□ 1.22
TNFRSF1B-202ENST00000489921 UMODL1Q5DID0 1318 aa22.7■■□□□ 1.22
TNFRSF1B-202ENST00000489921 SCN10AQ9Y5Y9 1956 aa22.69■■□□□ 1.22
TNFRSF1B-202ENST00000489921 KIAA1217Q5T5P2 1943 aa22.69■■□□□ 1.22
TNFRSF1B-202ENST00000489921 RAD50Q92878 1312 aa22.69■■□□□ 1.22
TNFRSF1B-202ENST00000489921 B4GALT4O60513 344 aa22.69■■□□□ 1.22
TNFRSF1B-202ENST00000489921 CYP21A2P08686 494 aa22.69■■□□□ 1.22
TNFRSF1B-202ENST00000489921 PURAQ00577 322 aaKnown RBP22.69■■□□□ 1.22
TNFRSF1B-202ENST00000489921 PDE4DQ08499 809 aa22.69■■□□□ 1.22
TNFRSF1B-202ENST00000489921 PPIGQ13427 754 aaKnown RBP eCLIP22.69■■□□□ 1.22
TNFRSF1B-202ENST00000489921 QRICH1Q2TAL8 776 aa22.69■■□□□ 1.22
TNFRSF1B-202ENST00000489921 COPS5Q92905 334 aa22.69■■□□□ 1.22
TNFRSF1B-202ENST00000489921 CHD7Q9P2D1 2997 aa22.68■■□□□ 1.22
TNFRSF1B-202ENST00000489921 ABCB11O95342 1321 aa22.68■■□□□ 1.22
TNFRSF1B-202ENST00000489921 ARIH2O95376 493 aa22.68■■□□□ 1.22
TNFRSF1B-202ENST00000489921 PARP1P09874 1014 aaKnown RBP22.68■■□□□ 1.22
TNFRSF1B-202ENST00000489921 ACRP10323 421 aa22.68■■□□□ 1.22
TNFRSF1B-202ENST00000489921 TMEM199Q8N511 208 aa22.68■■□□□ 1.22
TNFRSF1B-202ENST00000489921 SYTL5Q8TDW5 730 aaPredicted RBP22.68■■□□□ 1.22
TNFRSF1B-202ENST00000489921 VWCEQ96DN2 955 aa22.68■■□□□ 1.22
TNFRSF1B-202ENST00000489921 TAAR1Q96RJ0 339 aa22.68■■□□□ 1.22
TNFRSF1B-202ENST00000489921 SEZ6LQ9BYH1 1024 aa22.68■■□□□ 1.22
TNFRSF1B-202ENST00000489921 MAF1Q9H063 256 aa22.68■■□□□ 1.22
TNFRSF1B-202ENST00000489921 OPLAHO14841 1288 aa22.67■■□□□ 1.22
TNFRSF1B-202ENST00000489921 SLC35G1Q2M3R5 365 aa22.67■■□□□ 1.22
TNFRSF1B-202ENST00000489921 IFIT1BQ5T764 474 aaKnown RBP22.67■■□□□ 1.22
TNFRSF1B-202ENST00000489921 CCDC62Q6P9F0 684 aa22.67■■□□□ 1.22
TNFRSF1B-202ENST00000489921 ZNF365Q70YC5 407 aa22.67■■□□□ 1.22
TNFRSF1B-202ENST00000489921 MTMR8Q96EF0 704 aa22.67■■□□□ 1.22
TNFRSF1B-202ENST00000489921 UBAC1Q9BSL1 405 aa22.67■■□□□ 1.22
TNFRSF1B-202ENST00000489921 NOC4LQ9BVI4 516 aaKnown RBP22.67■■□□□ 1.22
TNFRSF1B-202ENST00000489921 ALDH8A1Q9H2A2 487 aaPredicted RBP22.67■■□□□ 1.22
TNFRSF1B-202ENST00000489921 VAT1LQ9HCJ6 419 aa22.67■■□□□ 1.22
TNFRSF1B-202ENST00000489921 MAD2L2Q9UI95 211 aa22.67■■□□□ 1.22
TNFRSF1B-202ENST00000489921 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms