RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	MYL10	Q9BUA6	226 aa		12.87	□□□□□ -0.35
GGA1-222	ENST00000489772	LRRC2	Q9BYS8	371 aa		12.87	□□□□□ -0.35
GGA1-222	ENST00000489772	SENP6	Q9GZR1	1112 aa	Predicted RBP	12.87	□□□□□ -0.35
GGA1-222	ENST00000489772	PCDHA1	Q9Y5I3	950 aa		12.87	□□□□□ -0.35
GGA1-222	ENST00000489772	ASTN1	O14525	1302 aa		12.87	□□□□□ -0.35
GGA1-222	ENST00000489772	PNMA6F	A0A0J9YX94	578 aa		12.86	□□□□□ -0.35
GGA1-222	ENST00000489772		H0YGN5	161 aa		12.86	□□□□□ -0.35
GGA1-222	ENST00000489772	EPB41L2	O43491	1005 aa	Known RBP	12.86	□□□□□ -0.35
GGA1-222	ENST00000489772	DUSP11	O75319	330 aa	Known RBP	12.86	□□□□□ -0.35
GGA1-222	ENST00000489772	PGK1	P00558	417 aa		12.86	□□□□□ -0.35
GGA1-222	ENST00000489772	ALDH5A1	P51649	535 aa	Predicted RBP	12.86	□□□□□ -0.35
GGA1-222	ENST00000489772	FGD1	P98174	961 aa		12.86	□□□□□ -0.35
GGA1-222	ENST00000489772	EXOSC10	Q01780	885 aa	Known RBP	12.86	□□□□□ -0.35
GGA1-222	ENST00000489772	COL9A3	Q14050	684 aa	Predicted RBP	12.86	□□□□□ -0.35
GGA1-222	ENST00000489772	LRRC41	Q15345	812 aa		12.86	□□□□□ -0.35
GGA1-222	ENST00000489772	SGMS1	Q86VZ5	419 aa		12.86	□□□□□ -0.35
GGA1-222	ENST00000489772	DNER	Q8NFT8	737 aa		12.86	□□□□□ -0.35
GGA1-222	ENST00000489772	MORC4	Q8TE76	937 aa		12.86	□□□□□ -0.35
GGA1-222	ENST00000489772	LENG1	Q96BZ8	264 aa	Predicted RBP	12.86	□□□□□ -0.35
GGA1-222	ENST00000489772	PIGS	Q96S52	555 aa		12.86	□□□□□ -0.35
GGA1-222	ENST00000489772	KATNBL1	Q9H079	304 aa		12.86	□□□□□ -0.35
GGA1-222	ENST00000489772	SPC25	Q9HBM1	224 aa		12.86	□□□□□ -0.35
GGA1-222	ENST00000489772	VTA1	Q9NP79	307 aa		12.86	□□□□□ -0.35
GGA1-222	ENST00000489772	CYTH3	O43739	400 aa		12.85	□□□□□ -0.35
GGA1-222	ENST00000489772	SMARCA1	P28370	1054 aa		12.85	□□□□□ -0.35
GGA1-222	ENST00000489772	NOL8	Q76FK4	1167 aa	Known RBP	12.85	□□□□□ -0.35
GGA1-222	ENST00000489772	EEPD1	Q7L9B9	569 aa		12.85	□□□□□ -0.35
GGA1-222	ENST00000489772	FBXO16	Q8IX29	292 aa	Predicted RBP	12.85	□□□□□ -0.35
GGA1-222	ENST00000489772	RRP36	Q96EU6	259 aa	Known RBP	12.85	□□□□□ -0.35
GGA1-222	ENST00000489772	JAKMIP1	Q96N16	626 aa	Known RBP	12.85	□□□□□ -0.35
GGA1-222	ENST00000489772	PPP1R11	O60927	126 aa	Predicted RBP	12.84	□□□□□ -0.35
GGA1-222	ENST00000489772	ADAMTS4	O75173	837 aa		12.84	□□□□□ -0.35
GGA1-222	ENST00000489772	RXRA	P19793	462 aa		12.84	□□□□□ -0.35
GGA1-222	ENST00000489772	PSMA5	P28066	241 aa		12.84	□□□□□ -0.35
GGA1-222	ENST00000489772	ADCYAP1R1	P41586	468 aa		12.84	□□□□□ -0.35
GGA1-222	ENST00000489772	TNFAIP2	Q03169	654 aa		12.84	□□□□□ -0.35
GGA1-222	ENST00000489772	PDE4D	Q08499	809 aa		12.84	□□□□□ -0.35
GGA1-222	ENST00000489772	SLC35G1	Q2M3R5	365 aa		12.84	□□□□□ -0.35
GGA1-222	ENST00000489772	IQSEC1	Q6DN90	963 aa		12.84	□□□□□ -0.35
GGA1-222	ENST00000489772	MICU3	Q86XE3	530 aa		12.84	□□□□□ -0.35
GGA1-222	ENST00000489772	C7orf61	Q8IZ16	206 aa		12.84	□□□□□ -0.35
GGA1-222	ENST00000489772	FANCB	Q8NB91	859 aa		12.84	□□□□□ -0.35
GGA1-222	ENST00000489772	SYTL5	Q8TDW5	730 aa	Predicted RBP	12.84	□□□□□ -0.35
GGA1-222	ENST00000489772	NSUN6	Q8TEA1	469 aa	Known RBP	12.84	□□□□□ -0.35
GGA1-222	ENST00000489772	PIBF1	Q8WXW3	757 aa		12.84	□□□□□ -0.35
GGA1-222	ENST00000489772	TCEANC2	Q96MN5	208 aa		12.84	□□□□□ -0.35
GGA1-222	ENST00000489772	SPZ1	Q9BXG8	430 aa		12.84	□□□□□ -0.35
GGA1-222	ENST00000489772	MAP3K20	Q9NYL2	800 aa	Known RBP	12.84	□□□□□ -0.35
GGA1-222	ENST00000489772	SEC63	Q9UGP8	760 aa	Known RBP	12.84	□□□□□ -0.35
GGA1-222	ENST00000489772	PHF24	Q9UPV7	400 aa		12.84	□□□□□ -0.35
GGA1-222	ENST00000489772	SNX14	Q9Y5W7	946 aa		12.84	□□□□□ -0.35
GGA1-222	ENST00000489772	DDX49	Q9Y6V7	483 aa	Known RBP	12.84	□□□□□ -0.35
GGA1-222	ENST00000489772	SYNRG	Q9UMZ2	1314 aa		12.84	□□□□□ -0.35
GGA1-222	ENST00000489772	CFB	P00751	764 aa		12.83	□□□□□ -0.36
GGA1-222	ENST00000489772	ATN1	P54259	1190 aa	Predicted RBP	12.83	□□□□□ -0.36
GGA1-222	ENST00000489772	LRRC26	Q2I0M4	334 aa		12.83	□□□□□ -0.36
GGA1-222	ENST00000489772	TAPT1	Q6NXT6	567 aa		12.83	□□□□□ -0.36
GGA1-222	ENST00000489772	BLOC1S2	Q6QNY1	142 aa		12.83	□□□□□ -0.36
GGA1-222	ENST00000489772	RAB11FIP4	Q86YS3	637 aa		12.83	□□□□□ -0.36
GGA1-222	ENST00000489772	SRBD1	Q8N5C6	995 aa	Known RBP	12.83	□□□□□ -0.36
GGA1-222	ENST00000489772	SAMD3	Q8N6K7	520 aa		12.83	□□□□□ -0.36
GGA1-222	ENST00000489772	TBC1D5	Q92609	795 aa		12.83	□□□□□ -0.36
GGA1-222	ENST00000489772	RMDN3	Q96TC7	470 aa		12.83	□□□□□ -0.36
GGA1-222	ENST00000489772	TSEN34	Q9BSV6	310 aa	Known RBP	12.83	□□□□□ -0.36
GGA1-222	ENST00000489772	RBM28	Q9NW13	759 aa	Known RBP	12.83	□□□□□ -0.36
GGA1-222	ENST00000489772	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	12.82	□□□□□ -0.36
GGA1-222	ENST00000489772	MOXD2P	A6NHM9	499 aa		12.82	□□□□□ -0.36
GGA1-222	ENST00000489772	ZBTB43	O43298	467 aa		12.82	□□□□□ -0.36
GGA1-222	ENST00000489772	ADCY6	O43306	1168 aa		12.82	□□□□□ -0.36
GGA1-222	ENST00000489772	PLEKHA8P1	O95397	391 aa		12.82	□□□□□ -0.36
GGA1-222	ENST00000489772	C6orf222	P0C671	652 aa	Predicted RBP	12.82	□□□□□ -0.36
GGA1-222	ENST00000489772	SMPD1	P17405	629 aa		12.82	□□□□□ -0.36
GGA1-222	ENST00000489772	EDNRB	P24530	442 aa		12.82	□□□□□ -0.36
GGA1-222	ENST00000489772	CST5	P28325	142 aa	Predicted RBP	12.82	□□□□□ -0.36
GGA1-222	ENST00000489772	HSD17B4	P51659	736 aa		12.82	□□□□□ -0.36
GGA1-222	ENST00000489772	GJA9	P57773	515 aa		12.82	□□□□□ -0.36
GGA1-222	ENST00000489772	KCNA10	Q16322	511 aa		12.82	□□□□□ -0.36
GGA1-222	ENST00000489772	ARHGEF16	Q5VV41	709 aa		12.82	□□□□□ -0.36
GGA1-222	ENST00000489772	APOA5	Q6Q788	366 aa		12.82	□□□□□ -0.36
GGA1-222	ENST00000489772	SLC39A5	Q6ZMH5	540 aa		12.82	□□□□□ -0.36
GGA1-222	ENST00000489772	TMTC3	Q6ZXV5	915 aa		12.82	□□□□□ -0.36
GGA1-222	ENST00000489772	CMTR1	Q8N1G2	835 aa	Known RBP	12.82	□□□□□ -0.36
GGA1-222	ENST00000489772	PCSK9	Q8NBP7	692 aa	Known RBP	12.82	□□□□□ -0.36
GGA1-222	ENST00000489772	KLHDC9	Q8NEP7	349 aa		12.82	□□□□□ -0.36
GGA1-222	ENST00000489772	SPDYE1	Q8NFV5	336 aa	Predicted RBP	12.82	□□□□□ -0.36
GGA1-222	ENST00000489772	FERMT2	Q96AC1	680 aa		12.82	□□□□□ -0.36
GGA1-222	ENST00000489772	TAAR1	Q96RJ0	339 aa		12.82	□□□□□ -0.36
GGA1-222	ENST00000489772	IWS1	Q96ST2	819 aa		12.82	□□□□□ -0.36
GGA1-222	ENST00000489772	USP26	Q9BXU7	913 aa		12.82	□□□□□ -0.36
GGA1-222	ENST00000489772	WDR11	Q9BZH6	1224 aa		12.82	□□□□□ -0.36
GGA1-222	ENST00000489772	AP5M1	Q9H0R1	490 aa		12.82	□□□□□ -0.36
GGA1-222	ENST00000489772	UPF3A	Q9H1J1	476 aa	Known RBP	12.82	□□□□□ -0.36
GGA1-222	ENST00000489772	PDGFC	Q9NRA1	345 aa		12.82	□□□□□ -0.36
GGA1-222	ENST00000489772	GNE	Q9Y223	722 aa	Known RBP	12.82	□□□□□ -0.36
GGA1-222	ENST00000489772	KLF18	A0A0U1RQI7	1052 aa		12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	GCOM1	H8Y6P7	765 aa	Predicted RBP	12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	OPLAH	O14841	1288 aa		12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	EIF5B	O60841	1220 aa	Known RBP	12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	POLR2M	P0CAP2	368 aa		12.81	□□□□□ -0.36
GGA1-222	ENST00000489772	CPA1	P15085	419 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 11 ms