RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 BAATQ14032 418 aaPredicted RBP13.88□□□□□ -0.19
ACTN4-206ENST00000489451 FSCN1Q16658 493 aaKnown RBP13.88□□□□□ -0.19
ACTN4-206ENST00000489451 RRP12Q5JTH9 1297 aaKnown RBP13.88□□□□□ -0.19
ACTN4-206ENST00000489451 PPP4R3BQ5MIZ7 849 aa13.88□□□□□ -0.19
ACTN4-206ENST00000489451 SYDE2Q5VT97 1194 aa13.88□□□□□ -0.19
ACTN4-206ENST00000489451 NSMFQ6X4W1 530 aa13.88□□□□□ -0.19
ACTN4-206ENST00000489451 SLC30A10Q6XR72 485 aa13.88□□□□□ -0.19
ACTN4-206ENST00000489451 LRFN3Q9BTN0 628 aa13.88□□□□□ -0.19
ACTN4-206ENST00000489451 LNPKQ9C0E8 428 aa13.88□□□□□ -0.19
ACTN4-206ENST00000489451 SPC25Q9HBM1 224 aa13.88□□□□□ -0.19
ACTN4-206ENST00000489451 GPCPD1Q9NPB8 672 aa13.88□□□□□ -0.19
ACTN4-206ENST00000489451 NEDD4P46934 1319 aa13.88□□□□□ -0.19
ACTN4-206ENST00000489451 CCDC171Q6TFL3 1326 aa13.88□□□□□ -0.19
ACTN4-206ENST00000489451 DYNC1LI2O43237 492 aaPredicted RBP13.87□□□□□ -0.19
ACTN4-206ENST00000489451 B4GALT4O60513 344 aa13.87□□□□□ -0.19
ACTN4-206ENST00000489451 TOP1P11387 765 aaKnown RBP13.87□□□□□ -0.19
ACTN4-206ENST00000489451 CYP2C18P33260 490 aa13.87□□□□□ -0.19
ACTN4-206ENST00000489451 ALDH5A1P51649 535 aaPredicted RBP13.87□□□□□ -0.19
ACTN4-206ENST00000489451 PSMC6P62333 389 aa13.87□□□□□ -0.19
ACTN4-206ENST00000489451 SMC5Q8IY18 1101 aa13.87□□□□□ -0.19
ACTN4-206ENST00000489451 WNT8AQ9H1J5 351 aa13.87□□□□□ -0.19
ACTN4-206ENST00000489451 CXXC1Q9P0U4 656 aaPredicted RBP13.87□□□□□ -0.19
ACTN4-206ENST00000489451 TCF20Q9UGU0 1960 aaKnown RBP13.87□□□□□ -0.19
ACTN4-206ENST00000489451 SCN10AQ9Y5Y9 1956 aa13.87□□□□□ -0.19
ACTN4-206ENST00000489451 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.86□□□□□ -0.19
ACTN4-206ENST00000489451 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.86□□□□□ -0.19
ACTN4-206ENST00000489451 IGHDP01880 384 aa13.86□□□□□ -0.19
ACTN4-206ENST00000489451 ZNF543Q08ER8 600 aa13.86□□□□□ -0.19
ACTN4-206ENST00000489451 PPIGQ13427 754 aaKnown RBP eCLIP13.86□□□□□ -0.19
ACTN4-206ENST00000489451 ITGA7Q13683 1181 aa13.86□□□□□ -0.19
ACTN4-206ENST00000489451 ZNF365Q70YC5 407 aa13.86□□□□□ -0.19
ACTN4-206ENST00000489451 NOL8Q76FK4 1167 aaKnown RBP13.86□□□□□ -0.19
ACTN4-206ENST00000489451 VTI1AQ96AJ9 217 aa13.86□□□□□ -0.19
ACTN4-206ENST00000489451 PBX4Q9BYU1 374 aa13.86□□□□□ -0.19
ACTN4-206ENST00000489451 TRPV6Q9H1D0 765 aa13.86□□□□□ -0.19
ACTN4-206ENST00000489451 CPVLQ9H3G5 476 aa13.86□□□□□ -0.19
ACTN4-206ENST00000489451 VTA1Q9NP79 307 aa13.86□□□□□ -0.19
ACTN4-206ENST00000489451 SCN5AQ14524 2016 aa13.86□□□□□ -0.19
ACTN4-206ENST00000489451 NCOR1O75376 2440 aa13.85□□□□□ -0.19
ACTN4-206ENST00000489451 PIEZO1Q92508 2521 aa13.85□□□□□ -0.19
ACTN4-206ENST00000489451 RBM47A0AV96 593 aaKnown RBP13.85□□□□□ -0.19
ACTN4-206ENST00000489451 EDNRBP24530 442 aa13.85□□□□□ -0.19
ACTN4-206ENST00000489451 DUSP28Q4G0W2 176 aa13.85□□□□□ -0.19
ACTN4-206ENST00000489451 AKNAD1Q5T1N1 836 aa13.85□□□□□ -0.19
ACTN4-206ENST00000489451 IQSEC1Q6DN90 963 aa13.85□□□□□ -0.19
ACTN4-206ENST00000489451 KIAA1211Q6ZU35 1233 aa13.85□□□□□ -0.19
ACTN4-206ENST00000489451 PLEKHM2Q8IWE5 1019 aa13.85□□□□□ -0.19
ACTN4-206ENST00000489451 TIFAQ96CG3 184 aa13.85□□□□□ -0.19
ACTN4-206ENST00000489451 GAS2L1Q99501 681 aaPredicted RBP13.85□□□□□ -0.19
ACTN4-206ENST00000489451 NOC4LQ9BVI4 516 aaKnown RBP13.85□□□□□ -0.19
ACTN4-206ENST00000489451 ZNF576Q9H609 170 aa13.85□□□□□ -0.19
ACTN4-206ENST00000489451 TOMM22Q9NS69 142 aa13.85□□□□□ -0.19
ACTN4-206ENST00000489451 Q9Y3F1 56 aa13.85□□□□□ -0.19
ACTN4-206ENST00000489451 BDP1A6H8Y1 2624 aa13.85□□□□□ -0.19
ACTN4-206ENST00000489451 RBAK-RBAKDNI3L0D1 243 aa13.84□□□□□ -0.19
ACTN4-206ENST00000489451 CABYRO75952 493 aa13.84□□□□□ -0.19
ACTN4-206ENST00000489451 SDSP20132 328 aa13.84□□□□□ -0.19
ACTN4-206ENST00000489451 TMEM31Q5JXX7 168 aa13.84□□□□□ -0.19
ACTN4-206ENST00000489451 TICAM2Q86XR7 235 aa13.84□□□□□ -0.19
ACTN4-206ENST00000489451 TMEM199Q8N511 208 aa13.84□□□□□ -0.19
ACTN4-206ENST00000489451 HERVK_113Q902F9 699 aa13.84□□□□□ -0.19
ACTN4-206ENST00000489451 NECAB3Q96P71 396 aaPredicted RBP13.84□□□□□ -0.19
ACTN4-206ENST00000489451 ZKSCAN3Q9BRR0 538 aa13.84□□□□□ -0.19
ACTN4-206ENST00000489451 IL25Q9H293 177 aa13.84□□□□□ -0.19
ACTN4-206ENST00000489451 HIPK3Q9H422 1215 aa13.84□□□□□ -0.19
ACTN4-206ENST00000489451 IL23AQ9NPF7 189 aa13.84□□□□□ -0.19
ACTN4-206ENST00000489451 TANC1Q9C0D5 1861 aa13.84□□□□□ -0.19
ACTN4-206ENST00000489451 PTPDC1A2A3K4 754 aa13.83□□□□□ -0.2
ACTN4-206ENST00000489451 TRIM6-TRIM34B2RNG4 842 aa13.83□□□□□ -0.2
ACTN4-206ENST00000489451 TLR3O15455 904 aaKnown RBP13.83□□□□□ -0.2
ACTN4-206ENST00000489451 ARIH2O95376 493 aa13.83□□□□□ -0.2
ACTN4-206ENST00000489451 GOLGA8HP0CJ92 632 aa13.83□□□□□ -0.2
ACTN4-206ENST00000489451 MRE11P49959 708 aa13.83□□□□□ -0.2
ACTN4-206ENST00000489451 CCL23P55773 120 aa13.83□□□□□ -0.2
ACTN4-206ENST00000489451 RPS6P62753 249 aaKnown RBP13.83□□□□□ -0.2
ACTN4-206ENST00000489451 PURAQ00577 322 aaKnown RBP13.83□□□□□ -0.2
ACTN4-206ENST00000489451 B4GALNT3Q6L9W6 998 aa13.83□□□□□ -0.2
ACTN4-206ENST00000489451 PSRC1Q6PGN9 363 aaPredicted RBP13.83□□□□□ -0.2
ACTN4-206ENST00000489451 PPP1R13LQ8WUF5 828 aa13.83□□□□□ -0.2
ACTN4-206ENST00000489451 COPS5Q92905 334 aa13.83□□□□□ -0.2
ACTN4-206ENST00000489451 RILPL2Q969X0 211 aa13.83□□□□□ -0.2
ACTN4-206ENST00000489451 WDR11Q9BZH6 1224 aa13.83□□□□□ -0.2
ACTN4-206ENST00000489451 AP5M1Q9H0R1 490 aa13.83□□□□□ -0.2
ACTN4-206ENST00000489451 OSBPL3Q9H4L5 887 aa13.83□□□□□ -0.2
ACTN4-206ENST00000489451 YBX2Q9Y2T7 364 aaKnown RBP13.83□□□□□ -0.2
ACTN4-206ENST00000489451 WDR19Q8NEZ3 1342 aa13.83□□□□□ -0.2
ACTN4-206ENST00000489451 CALML3P27482 149 aa13.82□□□□□ -0.2
ACTN4-206ENST00000489451 NUCB1Q02818 461 aa13.82□□□□□ -0.2
ACTN4-206ENST00000489451 ADGRE1Q14246 886 aa13.82□□□□□ -0.2
ACTN4-206ENST00000489451 RNF207Q6ZRF8 634 aa13.82□□□□□ -0.2
ACTN4-206ENST00000489451 MFSD6Q6ZSS7 791 aa13.82□□□□□ -0.2
ACTN4-206ENST00000489451 CHD1LQ86WJ1 897 aa13.82□□□□□ -0.2
ACTN4-206ENST00000489451 TBC1D5Q92609 795 aa13.82□□□□□ -0.2
ACTN4-206ENST00000489451 TTC14Q96N46 770 aa13.82□□□□□ -0.2
ACTN4-206ENST00000489451 UBA5Q9GZZ9 404 aa13.82□□□□□ -0.2
ACTN4-206ENST00000489451 ALDH8A1Q9H2A2 487 aaPredicted RBP13.82□□□□□ -0.2
ACTN4-206ENST00000489451 TRMT13Q9NUP7 481 aaKnown RBP13.82□□□□□ -0.2
ACTN4-206ENST00000489451 COL20A1Q9P218 1284 aa13.82□□□□□ -0.2
ACTN4-206ENST00000489451 ZBTB47Q9UFB7 747 aaPredicted RBP13.82□□□□□ -0.2
ACTN4-206ENST00000489451 MYH6P13533 1939 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms