RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 FBXO40Q9UH90 709 aa18.21■□□□□ 0.51
UFD1-209ENST00000489406 NOD1Q9Y239 953 aa18.21■□□□□ 0.51
UFD1-209ENST00000489406 ATP2A1O14983 1001 aa18.2■□□□□ 0.5
UFD1-209ENST00000489406 ZBED4O75132 1171 aa18.2■□□□□ 0.5
UFD1-209ENST00000489406 SIGLEC14Q08ET2 396 aa18.2■□□□□ 0.5
UFD1-209ENST00000489406 SMAD4Q13485 552 aaKnown RBP18.2■□□□□ 0.5
UFD1-209ENST00000489406 TAPT1Q6NXT6 567 aa18.2■□□□□ 0.5
UFD1-209ENST00000489406 FBXO16Q8IX29 292 aaPredicted RBP18.2■□□□□ 0.5
UFD1-209ENST00000489406 FAM133AQ8N9E0 248 aa18.2■□□□□ 0.5
UFD1-209ENST00000489406 RIOK1Q9BRS2 568 aaKnown RBP18.2■□□□□ 0.5
UFD1-209ENST00000489406 MTG1Q9BT17 334 aaPredicted RBP18.2■□□□□ 0.5
UFD1-209ENST00000489406 GPHNQ9NQX3 736 aaPredicted RBP18.2■□□□□ 0.5
UFD1-209ENST00000489406 INSL6Q9Y581 213 aa18.2■□□□□ 0.5
UFD1-209ENST00000489406 ZFHX4Q86UP3 3567 aa18.2■□□□□ 0.5
UFD1-209ENST00000489406 TPRP12270 2363 aaKnown RBP18.19■□□□□ 0.5
UFD1-209ENST00000489406 ABHD14A-ACY1A0A1B0GW23 586 aa18.19■□□□□ 0.5
UFD1-209ENST00000489406 ASB14A6NK59 587 aa18.19■□□□□ 0.5
UFD1-209ENST00000489406 H3BNC9 293 aa18.19■□□□□ 0.5
UFD1-209ENST00000489406 NCK2O43639 380 aa18.19■□□□□ 0.5
UFD1-209ENST00000489406 CTC1Q2NKJ3 1217 aa18.19■□□□□ 0.5
UFD1-209ENST00000489406 DGLUCYQ7Z3D6 616 aa18.19■□□□□ 0.5
UFD1-209ENST00000489406 PRPF38AQ8NAV1 312 aaKnown RBP18.19■□□□□ 0.5
UFD1-209ENST00000489406 CHST13Q8NET6 341 aa18.19■□□□□ 0.5
UFD1-209ENST00000489406 NAV1Q8NEY1 1877 aa18.19■□□□□ 0.5
UFD1-209ENST00000489406 ASIC4Q96FT7 647 aa18.19■□□□□ 0.5
UFD1-209ENST00000489406 MEIS3Q99687 375 aa18.19■□□□□ 0.5
UFD1-209ENST00000489406 HOMER2Q9NSB8 354 aa18.19■□□□□ 0.5
UFD1-209ENST00000489406 MYO7AQ13402 2215 aa18.19■□□□□ 0.5
UFD1-209ENST00000489406 GALR2O43603 387 aaPredicted RBP18.18■□□□□ 0.5
UFD1-209ENST00000489406 G3BP1Q13283 466 aaKnown RBP eCLIP18.18■□□□□ 0.5
UFD1-209ENST00000489406 MKRN4PQ13434 485 aaPredicted RBP18.18■□□□□ 0.5
UFD1-209ENST00000489406 KIAA1211Q6ZU35 1233 aa18.18■□□□□ 0.5
UFD1-209ENST00000489406 AFAP1L1Q8TED9 768 aa18.18■□□□□ 0.5
UFD1-209ENST00000489406 NKD2Q969F2 451 aaPredicted RBP18.18■□□□□ 0.5
UFD1-209ENST00000489406 TRIP12Q14669 1992 aaPredicted RBP18.17■□□□□ 0.5
UFD1-209ENST00000489406 VPS13AQ96RL7 3174 aa18.17■□□□□ 0.5
UFD1-209ENST00000489406 IKBKEQ14164 716 aa18.17■□□□□ 0.5
UFD1-209ENST00000489406 NFRKBQ6P4R8 1299 aa18.17■□□□□ 0.5
UFD1-209ENST00000489406 FRMD5Q7Z6J6 570 aa18.17■□□□□ 0.5
UFD1-209ENST00000489406 SDR42E1Q8WUS8 393 aa18.17■□□□□ 0.5
UFD1-209ENST00000489406 KIFC2Q96AC6 838 aa18.17■□□□□ 0.5
UFD1-209ENST00000489406 RMDN1Q96DB5 314 aa18.17■□□□□ 0.5
UFD1-209ENST00000489406 CCDC17Q96LX7 622 aa18.17■□□□□ 0.5
UFD1-209ENST00000489406 SAMD11Q96NU1 681 aa18.17■□□□□ 0.5
UFD1-209ENST00000489406 CRNKL1Q9BZJ0 848 aaKnown RBP18.17■□□□□ 0.5
UFD1-209ENST00000489406 KANSL2Q9H9L4 492 aa18.17■□□□□ 0.5
UFD1-209ENST00000489406 WDR87Q6ZQQ6 2873 aa18.17■□□□□ 0.5
UFD1-209ENST00000489406 MAGEB6P1A0A0J9YX57 407 aa18.16■□□□□ 0.5
UFD1-209ENST00000489406 USP17L12C9JPN9 530 aa18.16■□□□□ 0.5
UFD1-209ENST00000489406 USP17L21D6R901 530 aa18.16■□□□□ 0.5
UFD1-209ENST00000489406 NBNO60934 754 aa18.16■□□□□ 0.5
UFD1-209ENST00000489406 PDGFBP01127 241 aaPredicted RBP18.16■□□□□ 0.5
UFD1-209ENST00000489406 SELPP16109 830 aa18.16■□□□□ 0.5
UFD1-209ENST00000489406 CPT1AP50416 773 aa18.16■□□□□ 0.5
UFD1-209ENST00000489406 NUBP1P53384 320 aa18.16■□□□□ 0.5
UFD1-209ENST00000489406 CHMP4BP1P59074 171 aa18.16■□□□□ 0.5
UFD1-209ENST00000489406 HYAL1Q12794 435 aa18.16■□□□□ 0.5
UFD1-209ENST00000489406 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.16■□□□□ 0.5
UFD1-209ENST00000489406 LRRC8DQ7L1W4 858 aa18.16■□□□□ 0.5
UFD1-209ENST00000489406 CCDC155Q8N6L0 562 aa18.16■□□□□ 0.5
UFD1-209ENST00000489406 ZNF512BQ96KM6 892 aaPredicted RBP18.16■□□□□ 0.5
UFD1-209ENST00000489406 CD207Q9UJ71 328 aa18.16■□□□□ 0.5
UFD1-209ENST00000489406 MYH8P13535 1937 aa18.15■□□□□ 0.5
UFD1-209ENST00000489406 LOC730098B7Z3J9 87 aa18.15■□□□□ 0.5
UFD1-209ENST00000489406 TBX10O75333 385 aa18.15■□□□□ 0.5
UFD1-209ENST00000489406 CXCL10P02778 98 aa18.15■□□□□ 0.5
UFD1-209ENST00000489406 MTX1Q13505 466 aa18.15■□□□□ 0.5
UFD1-209ENST00000489406 PTGISQ16647 500 aa18.15■□□□□ 0.5
UFD1-209ENST00000489406 DUSP28Q4G0W2 176 aa18.15■□□□□ 0.5
UFD1-209ENST00000489406 TNNI3KQ59H18 835 aa18.15■□□□□ 0.5
UFD1-209ENST00000489406 CAGE1Q8TC20 777 aa18.15■□□□□ 0.5
UFD1-209ENST00000489406 SP7Q8TDD2 431 aaPredicted RBP18.15■□□□□ 0.5
UFD1-209ENST00000489406 IGFLR1Q9H665 355 aa18.15■□□□□ 0.5
UFD1-209ENST00000489406 SLC38A10Q9HBR0 1119 aa18.15■□□□□ 0.5
UFD1-209ENST00000489406 DCP1AQ9NPI6 582 aaPredicted RBP18.15■□□□□ 0.5
UFD1-209ENST00000489406 A1CFQ9NQ94 594 aaKnown RBP18.15■□□□□ 0.5
UFD1-209ENST00000489406 COG6Q9Y2V7 657 aa18.15■□□□□ 0.5
UFD1-209ENST00000489406 FPGT-TNNI3KV9GXZ4 949 aa18.15■□□□□ 0.5
UFD1-209ENST00000489406 LINC01565O15544 149 aa18.14■□□□□ 0.49
UFD1-209ENST00000489406 EFCAB14O75071 495 aa18.14■□□□□ 0.49
UFD1-209ENST00000489406 GTF2F1P35269 517 aaKnown RBP eCLIP18.14■□□□□ 0.49
UFD1-209ENST00000489406 HTRA4P83105 476 aaPredicted RBP18.14■□□□□ 0.49
UFD1-209ENST00000489406 PTPN11Q06124 597 aaPredicted RBP18.14■□□□□ 0.49
UFD1-209ENST00000489406 TMEM192Q8IY95 271 aa18.14■□□□□ 0.49
UFD1-209ENST00000489406 ANTXR1Q9H6X2 564 aa18.14■□□□□ 0.49
UFD1-209ENST00000489406 DNAH14Q0VDD8 3507 aa18.14■□□□□ 0.49
UFD1-209ENST00000489406 ZNF292O60281 2723 aa18.14■□□□□ 0.49
UFD1-209ENST00000489406 SCN10AQ9Y5Y9 1956 aa18.13■□□□□ 0.49
UFD1-209ENST00000489406 CHD8Q9HCK8 2581 aa18.13■□□□□ 0.49
UFD1-209ENST00000489406 E9PSI1 815 aa18.13■□□□□ 0.49
UFD1-209ENST00000489406 CDK8P49336 464 aa18.13■□□□□ 0.49
UFD1-209ENST00000489406 FBXO11Q86XK2 927 aa18.13■□□□□ 0.49
UFD1-209ENST00000489406 MYOCDQ8IZQ8 938 aa18.13■□□□□ 0.49
UFD1-209ENST00000489406 OR6J1Q8NGC5 347 aa18.13■□□□□ 0.49
UFD1-209ENST00000489406 ACAD9Q9H845 621 aa18.13■□□□□ 0.49
UFD1-209ENST00000489406 VTA1Q9NP79 307 aa18.13■□□□□ 0.49
UFD1-209ENST00000489406 DMXL1Q9Y485 3027 aa18.12■□□□□ 0.49
UFD1-209ENST00000489406 ACACBO00763 2458 aa18.12■□□□□ 0.49
UFD1-209ENST00000489406 F5H6K3 240 aa18.12■□□□□ 0.49
UFD1-209ENST00000489406 KLRC3Q07444 240 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms