RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 CBFA2T2O43439 604 aa9.62□□□□□ -0.87
VTI1A-207ENST00000489357 SMC2O95347 1197 aa9.62□□□□□ -0.87
VTI1A-207ENST00000489357 BTDP43251 543 aa9.62□□□□□ -0.87
VTI1A-207ENST00000489357 ATP2C1P98194 919 aaPredicted RBP9.62□□□□□ -0.87
VTI1A-207ENST00000489357 MYL5Q02045 173 aa9.62□□□□□ -0.87
VTI1A-207ENST00000489357 NOLC1Q14978 699 aaKnown RBP eCLIP9.62□□□□□ -0.87
VTI1A-207ENST00000489357 SH3D19Q5HYK7 790 aa9.62□□□□□ -0.87
VTI1A-207ENST00000489357 DRC7Q8IY82 874 aa9.62□□□□□ -0.87
VTI1A-207ENST00000489357 SRBD1Q8N5C6 995 aaKnown RBP9.62□□□□□ -0.87
VTI1A-207ENST00000489357 SPATA20Q8TB22 786 aa9.62□□□□□ -0.87
VTI1A-207ENST00000489357 TEKT1Q969V4 418 aa9.62□□□□□ -0.87
VTI1A-207ENST00000489357 GLIS2Q9BZE0 524 aaPredicted RBP9.62□□□□□ -0.87
VTI1A-207ENST00000489357 GTPBP4Q9BZE4 634 aaKnown RBP9.62□□□□□ -0.87
VTI1A-207ENST00000489357 OSBPL5Q9H0X9 879 aaPredicted RBP9.62□□□□□ -0.87
VTI1A-207ENST00000489357 GGA3Q9NZ52 723 aa9.62□□□□□ -0.87
VTI1A-207ENST00000489357 ZNF70Q9UC06 446 aaPredicted RBP9.62□□□□□ -0.87
VTI1A-207ENST00000489357 KCNJ14Q9UNX9 436 aa9.62□□□□□ -0.87
VTI1A-207ENST00000489357 FLT1P17948 1338 aa9.61□□□□□ -0.87
VTI1A-207ENST00000489357 MYH1P12882 1939 aa9.61□□□□□ -0.87
VTI1A-207ENST00000489357 ESYT2A0FGR8 921 aa9.61□□□□□ -0.87
VTI1A-207ENST00000489357 PALM3A6NDB9 673 aaPredicted RBP9.61□□□□□ -0.87
VTI1A-207ENST00000489357 TMEM88BA6NKF7 163 aa9.61□□□□□ -0.87
VTI1A-207ENST00000489357 PRDM1O75626 825 aa9.61□□□□□ -0.87
VTI1A-207ENST00000489357 PLEKHA8P1O95397 391 aa9.61□□□□□ -0.87
VTI1A-207ENST00000489357 TUBB4AP04350 444 aa9.61□□□□□ -0.87
VTI1A-207ENST00000489357 MYL1P05976 194 aa9.61□□□□□ -0.87
VTI1A-207ENST00000489357 TOP1P11387 765 aaKnown RBP9.61□□□□□ -0.87
VTI1A-207ENST00000489357 RASA1P20936 1047 aa9.61□□□□□ -0.87
VTI1A-207ENST00000489357 ERCC5P28715 1186 aaPredicted RBP9.61□□□□□ -0.87
VTI1A-207ENST00000489357 HOXA7P31268 230 aaPredicted RBP9.61□□□□□ -0.87
VTI1A-207ENST00000489357 SARSP49591 514 aaKnown RBP9.61□□□□□ -0.87
VTI1A-207ENST00000489357 RHBDL3P58872 404 aa9.61□□□□□ -0.87
VTI1A-207ENST00000489357 NLRP5P59047 1200 aa9.61□□□□□ -0.87
VTI1A-207ENST00000489357 NR5A1Q13285 461 aa9.61□□□□□ -0.87
VTI1A-207ENST00000489357 POSTNQ15063 836 aa9.61□□□□□ -0.87
VTI1A-207ENST00000489357 SKIV2LQ15477 1246 aaKnown RBP9.61□□□□□ -0.87
VTI1A-207ENST00000489357 NPY5RQ15761 445 aa9.61□□□□□ -0.87
VTI1A-207ENST00000489357 PUS10Q3MIT2 529 aaKnown RBP9.61□□□□□ -0.87
VTI1A-207ENST00000489357 DPCR1Q3MIW9 517 aa9.61□□□□□ -0.87
VTI1A-207ENST00000489357 TTC38Q5R3I4 469 aa9.61□□□□□ -0.87
VTI1A-207ENST00000489357 DLK2Q6UY11 383 aa9.61□□□□□ -0.87
VTI1A-207ENST00000489357 KRT26Q7Z3Y9 468 aa9.61□□□□□ -0.87
VTI1A-207ENST00000489357 TEX11Q8IYF3 940 aa9.61□□□□□ -0.87
VTI1A-207ENST00000489357 AOPEPQ8N6M6 819 aa9.61□□□□□ -0.87
VTI1A-207ENST00000489357 CCDC150Q8NCX0 1101 aa9.61□□□□□ -0.87
VTI1A-207ENST00000489357 TGFBRAP1Q8WUH2 860 aa9.61□□□□□ -0.87
VTI1A-207ENST00000489357 DCPSQ96C86 337 aaKnown RBP9.61□□□□□ -0.87
VTI1A-207ENST00000489357 TEPSINQ96N21 525 aa9.61□□□□□ -0.87
VTI1A-207ENST00000489357 GSDMAQ96QA5 445 aa9.61□□□□□ -0.87
VTI1A-207ENST00000489357 GOPCQ9HD26 462 aa9.61□□□□□ -0.87
VTI1A-207ENST00000489357 CABP5Q9NP86 173 aa9.61□□□□□ -0.87
VTI1A-207ENST00000489357 IL17RBQ9NRM6 502 aa9.61□□□□□ -0.87
VTI1A-207ENST00000489357 VPS54Q9P1Q0 977 aa9.61□□□□□ -0.87
VTI1A-207ENST00000489357 PCDHA4Q9UN74 947 aa9.61□□□□□ -0.87
VTI1A-207ENST00000489357 PCDHB6Q9Y5E3 794 aa9.61□□□□□ -0.87
VTI1A-207ENST00000489357 SLFN14P0C7P3 912 aa9.6□□□□□ -0.87
VTI1A-207ENST00000489357 NDUFV2P19404 249 aa9.6□□□□□ -0.87
VTI1A-207ENST00000489357 LONP1P36776 959 aaKnown RBP9.6□□□□□ -0.87
VTI1A-207ENST00000489357 TXLNAP40222 546 aa9.6□□□□□ -0.87
VTI1A-207ENST00000489357 PRPHP41219 470 aa9.6□□□□□ -0.87
VTI1A-207ENST00000489357 FAM47AQ5JRC9 791 aa9.6□□□□□ -0.87
VTI1A-207ENST00000489357 MORN1Q5T089 497 aa9.6□□□□□ -0.87
VTI1A-207ENST00000489357 CDC42EP5Q6NZY7 148 aa9.6□□□□□ -0.87
VTI1A-207ENST00000489357 FAM83AQ86UY5 434 aa9.6□□□□□ -0.87
VTI1A-207ENST00000489357 METTL16Q86W50 562 aaKnown RBP9.6□□□□□ -0.87
VTI1A-207ENST00000489357 APOBEC3FQ8IUX4 373 aaKnown RBP9.6□□□□□ -0.87
VTI1A-207ENST00000489357 TEX2Q8IWB9 1127 aa9.6□□□□□ -0.87
VTI1A-207ENST00000489357 BLIDQ8IZY5 108 aa9.6□□□□□ -0.87
VTI1A-207ENST00000489357 SMARCE1Q969G3 411 aa9.6□□□□□ -0.87
VTI1A-207ENST00000489357 NAP1L5Q96NT1 182 aaPredicted RBP9.6□□□□□ -0.87
VTI1A-207ENST00000489357 IDI2Q9BXS1 227 aa9.6□□□□□ -0.87
VTI1A-207ENST00000489357 EHD4Q9H223 541 aa9.6□□□□□ -0.87
VTI1A-207ENST00000489357 TDRD3Q9H7E2 651 aaKnown RBP9.6□□□□□ -0.87
VTI1A-207ENST00000489357 TTC12Q9H892 705 aaPredicted RBP9.6□□□□□ -0.87
VTI1A-207ENST00000489357 PPP2R3BQ9Y5P8 575 aa9.6□□□□□ -0.87
VTI1A-207ENST00000489357 CNTNAP1P78357 1384 aa9.6□□□□□ -0.87
VTI1A-207ENST00000489357 ADM5C9JUS6 153 aa9.59□□□□□ -0.87
VTI1A-207ENST00000489357 KIF2AO00139 706 aaPredicted RBP9.59□□□□□ -0.87
VTI1A-207ENST00000489357 SPTLC1O15269 473 aa9.59□□□□□ -0.87
VTI1A-207ENST00000489357 CYP2D6P10635 497 aa9.59□□□□□ -0.87
VTI1A-207ENST00000489357 GNA11P29992 359 aa9.59□□□□□ -0.87
VTI1A-207ENST00000489357 GJA5P36382 358 aa9.59□□□□□ -0.87
VTI1A-207ENST00000489357 CDK8P49336 464 aa9.59□□□□□ -0.87
VTI1A-207ENST00000489357 MAP3K10Q02779 954 aa9.59□□□□□ -0.87
VTI1A-207ENST00000489357 NCAPHQ15003 741 aa9.59□□□□□ -0.87
VTI1A-207ENST00000489357 LONRF3Q496Y0 759 aa9.59□□□□□ -0.87
VTI1A-207ENST00000489357 ASPRV1Q53RT3 343 aa9.59□□□□□ -0.87
VTI1A-207ENST00000489357 BLOC1S3Q6QNY0 202 aa9.59□□□□□ -0.87
VTI1A-207ENST00000489357 CCDC186Q7Z3E2 898 aa9.59□□□□□ -0.87
VTI1A-207ENST00000489357 LRRC8AQ8IWT6 810 aa9.59□□□□□ -0.87
VTI1A-207ENST00000489357 CCDC82Q8N4S0 544 aa9.59□□□□□ -0.87
VTI1A-207ENST00000489357 IQUBQ8NA54 791 aa9.59□□□□□ -0.87
VTI1A-207ENST00000489357 ENOX1Q8TC92 643 aaKnown RBP9.59□□□□□ -0.87
VTI1A-207ENST00000489357 HLA-CQ95604 372 aa9.59□□□□□ -0.87
VTI1A-207ENST00000489357 CDCA5Q96FF9 252 aa9.59□□□□□ -0.87
VTI1A-207ENST00000489357 HHIPL1Q96JK4 782 aa9.59□□□□□ -0.87
VTI1A-207ENST00000489357 CCDC17Q96LX7 622 aa9.59□□□□□ -0.87
VTI1A-207ENST00000489357 AK8Q96MA6 479 aa9.59□□□□□ -0.87
VTI1A-207ENST00000489357 CLIC6Q96NY7 704 aa9.59□□□□□ -0.87
VTI1A-207ENST00000489357 TMEM47Q9BQJ4 181 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms