RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 TAF6LQ9Y6J9 622 aa6.2□□□□□ -1.42
XRN1-213ENST00000489241 ESYT3A0FGR9 886 aa6.19□□□□□ -1.42
XRN1-213ENST00000489241 FADS2P1A8MWK0 482 aa6.19□□□□□ -1.42
XRN1-213ENST00000489241 MEIS1O00470 390 aa6.19□□□□□ -1.42
XRN1-213ENST00000489241 SHOXO15266 292 aa6.19□□□□□ -1.42
XRN1-213ENST00000489241 CDC45O75419 566 aa6.19□□□□□ -1.42
XRN1-213ENST00000489241 NOP2P46087 812 aaKnown RBP6.19□□□□□ -1.42
XRN1-213ENST00000489241 ZNF445P59923 1031 aa6.19□□□□□ -1.42
XRN1-213ENST00000489241 ERVFRD-1P60508 538 aa6.19□□□□□ -1.42
XRN1-213ENST00000489241 SRSF3P84103 164 aaKnown RBP6.19□□□□□ -1.42
XRN1-213ENST00000489241 SQSTM1Q13501 440 aa6.19□□□□□ -1.42
XRN1-213ENST00000489241 PTPROQ16827 1216 aa6.19□□□□□ -1.42
XRN1-213ENST00000489241 HSF5Q4G112 596 aaPredicted RBP6.19□□□□□ -1.42
XRN1-213ENST00000489241 OLFML2BQ68BL8 750 aa6.19□□□□□ -1.42
XRN1-213ENST00000489241 CWF19L1Q69YN2 538 aaKnown RBP6.19□□□□□ -1.42
XRN1-213ENST00000489241 GALNT18Q6P9A2 607 aa6.19□□□□□ -1.42
XRN1-213ENST00000489241 CRTC3Q6UUV7 619 aa6.19□□□□□ -1.42
XRN1-213ENST00000489241 BRF1Q92994 677 aa6.19□□□□□ -1.42
XRN1-213ENST00000489241 PPP1R14AQ96A00 147 aa6.19□□□□□ -1.42
XRN1-213ENST00000489241 RCC1LQ96I51 464 aaKnown RBP6.19□□□□□ -1.42
XRN1-213ENST00000489241 ERVK13-1Q9NX77 482 aa6.19□□□□□ -1.42
XRN1-213ENST00000489241 LRP2BPQ9P2M1 347 aa6.19□□□□□ -1.42
XRN1-213ENST00000489241 KCTD3Q9Y597 815 aa6.19□□□□□ -1.42
XRN1-213ENST00000489241 IQCA1LA6NCM1 817 aa6.18□□□□□ -1.42
XRN1-213ENST00000489241 ABLIM1O14639 778 aa6.18□□□□□ -1.42
XRN1-213ENST00000489241 GSNP06396 782 aa6.18□□□□□ -1.42
XRN1-213ENST00000489241 CTSKP43235 329 aa6.18□□□□□ -1.42
XRN1-213ENST00000489241 YBX1P67809 324 aaKnown RBP6.18□□□□□ -1.42
XRN1-213ENST00000489241 MTERF2Q49AM1 385 aa6.18□□□□□ -1.42
XRN1-213ENST00000489241 TCERG1LQ5VWI1 586 aa6.18□□□□□ -1.42
XRN1-213ENST00000489241 MRM1Q6IN84 353 aaKnown RBP6.18□□□□□ -1.42
XRN1-213ENST00000489241 POMZP3Q6PJE2 187 aa6.18□□□□□ -1.42
XRN1-213ENST00000489241 SLCO6A1Q86UG4 719 aa6.18□□□□□ -1.42
XRN1-213ENST00000489241 JMYQ8N9B5 988 aa6.18□□□□□ -1.42
XRN1-213ENST00000489241 BVESQ8NE79 360 aa6.18□□□□□ -1.42
XRN1-213ENST00000489241 APPBP2Q92624 585 aa6.18□□□□□ -1.42
XRN1-213ENST00000489241 ZNF669Q96BR6 464 aaPredicted RBP6.18□□□□□ -1.42
XRN1-213ENST00000489241 CDADC1Q9BWV3 514 aa6.18□□□□□ -1.42
XRN1-213ENST00000489241 NOL6Q9H6R4 1146 aaKnown RBP6.18□□□□□ -1.42
XRN1-213ENST00000489241 TMEM260Q9NX78 707 aa6.18□□□□□ -1.42
XRN1-213ENST00000489241 SIRT5Q9NXA8 310 aa6.18□□□□□ -1.42
XRN1-213ENST00000489241 SUSD2Q9UGT4 822 aa6.18□□□□□ -1.42
XRN1-213ENST00000489241 AKT3Q9Y243 479 aa6.18□□□□□ -1.42
XRN1-213ENST00000489241 WTIPA6NIX2 430 aaPredicted RBP6.17□□□□□ -1.42
XRN1-213ENST00000489241 DIAPH1O60610 1272 aaKnown RBP6.17□□□□□ -1.42
XRN1-213ENST00000489241 VIPR1P32241 457 aa6.17□□□□□ -1.42
XRN1-213ENST00000489241 ARL4AP40617 200 aa6.17□□□□□ -1.42
XRN1-213ENST00000489241 POU4F1Q01851 419 aa6.17□□□□□ -1.42
XRN1-213ENST00000489241 LAPTM5Q13571 262 aa6.17□□□□□ -1.42
XRN1-213ENST00000489241 SSPNQ14714 243 aa6.17□□□□□ -1.42
XRN1-213ENST00000489241 RNF187Q5TA31 235 aaPredicted RBP6.17□□□□□ -1.42
XRN1-213ENST00000489241 SPATC1Q76KD6 591 aa6.17□□□□□ -1.42
XRN1-213ENST00000489241 KIAA0907Q7Z7F0 614 aaPredicted RBP6.17□□□□□ -1.42
XRN1-213ENST00000489241 HOMER1Q86YM7 354 aa6.17□□□□□ -1.42
XRN1-213ENST00000489241 TMEM151BQ8IW70 566 aa6.17□□□□□ -1.42
XRN1-213ENST00000489241 FIBCD1Q8N539 461 aa6.17□□□□□ -1.42
XRN1-213ENST00000489241 SIGLEC10Q96LC7 697 aa6.17□□□□□ -1.42
XRN1-213ENST00000489241 IFT57Q9NWB7 429 aa6.17□□□□□ -1.42
XRN1-213ENST00000489241 IRAK3Q9Y616 596 aa6.17□□□□□ -1.42
XRN1-213ENST00000489241 A0A1W2PQ45 241 aaPredicted RBP6.16□□□□□ -1.42
XRN1-213ENST00000489241 A0A1W2PQY0 241 aa6.16□□□□□ -1.42
XRN1-213ENST00000489241 N4BP3O15049 544 aa6.16□□□□□ -1.42
XRN1-213ENST00000489241 VAV1P15498 845 aa6.16□□□□□ -1.42
XRN1-213ENST00000489241 PI3P19957 117 aa6.16□□□□□ -1.42
XRN1-213ENST00000489241 SDHBP21912 280 aa6.16□□□□□ -1.42
XRN1-213ENST00000489241 PPP2R5DQ14738 602 aa6.16□□□□□ -1.42
XRN1-213ENST00000489241 C2orf27AQ580R0 203 aa6.16□□□□□ -1.42
XRN1-213ENST00000489241 LRRC47Q8N1G4 583 aaKnown RBP6.16□□□□□ -1.42
XRN1-213ENST00000489241 ARHGEF39Q8N4T4 335 aa6.16□□□□□ -1.42
XRN1-213ENST00000489241 ADCY4Q8NFM4 1077 aa6.16□□□□□ -1.42
XRN1-213ENST00000489241 THAP3Q8WTV1 239 aaPredicted RBP6.16□□□□□ -1.42
XRN1-213ENST00000489241 AP5S1Q9NUS5 200 aa6.16□□□□□ -1.42
XRN1-213ENST00000489241 PFDN2Q9UHV9 154 aa6.16□□□□□ -1.42
XRN1-213ENST00000489241 MPOP05164 745 aa6.15□□□□□ -1.42
XRN1-213ENST00000489241 CEBPAP49715 358 aaPredicted RBP6.15□□□□□ -1.42
XRN1-213ENST00000489241 EPHB3P54753 998 aa6.15□□□□□ -1.42
XRN1-213ENST00000489241 CTSWP56202 376 aa6.15□□□□□ -1.42
XRN1-213ENST00000489241 TMEM62Q0P6H9 643 aa6.15□□□□□ -1.42
XRN1-213ENST00000489241 GRB10Q13322 594 aa6.15□□□□□ -1.42
XRN1-213ENST00000489241 SLC10A6Q3KNW5 377 aa6.15□□□□□ -1.42
XRN1-213ENST00000489241 C16orf86Q6ZW13 317 aa6.15□□□□□ -1.42
XRN1-213ENST00000489241 FILIP1Q7Z7B0 1213 aa6.15□□□□□ -1.42
XRN1-213ENST00000489241 NUP43Q8NFH3 380 aa6.15□□□□□ -1.42
XRN1-213ENST00000489241 SGSM3Q96HU1 749 aa6.15□□□□□ -1.42
XRN1-213ENST00000489241 BRINP2Q9C0B6 783 aa6.15□□□□□ -1.42
XRN1-213ENST00000489241 CNTD2Q9H8S5 307 aa6.15□□□□□ -1.42
XRN1-213ENST00000489241 PARD6AQ9NPB6 346 aa6.15□□□□□ -1.42
XRN1-213ENST00000489241 EMC9Q9Y3B6 208 aa6.15□□□□□ -1.42
XRN1-213ENST00000489241 NCANO14594 1321 aa6.15□□□□□ -1.43
XRN1-213ENST00000489241 KDM2BQ8NHM5 1336 aa6.15□□□□□ -1.43
XRN1-213ENST00000489241 hCG_2014768A0A024R1R8 64 aa6.14□□□□□ -1.43
XRN1-213ENST00000489241 H0Y8X5 98 aa6.14□□□□□ -1.43
XRN1-213ENST00000489241 IRS4O14654 1257 aaPredicted RBP6.14□□□□□ -1.43
XRN1-213ENST00000489241 DNAJC6O75061 913 aa6.14□□□□□ -1.43
XRN1-213ENST00000489241 PRKCAP17252 672 aa6.14□□□□□ -1.43
XRN1-213ENST00000489241 HOXA5P20719 270 aa6.14□□□□□ -1.43
XRN1-213ENST00000489241 GYS2P54840 703 aa6.14□□□□□ -1.43
XRN1-213ENST00000489241 IGBP1P78318 339 aa6.14□□□□□ -1.43
XRN1-213ENST00000489241 AMPD2Q01433 879 aa6.14□□□□□ -1.43
XRN1-213ENST00000489241 SSRP1Q08945 709 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms