RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 OR52Z1P0C646 297 aa11.38□□□□□ -0.59
USP11-211ENST00000489111 ZSCAN23Q3MJ62 389 aa11.38□□□□□ -0.59
USP11-211ENST00000489111 RESP18Q5W5W9 173 aa11.38□□□□□ -0.59
USP11-211ENST00000489111 ARL6IP4Q66PJ3 421 aaKnown RBP11.38□□□□□ -0.59
USP11-211ENST00000489111 SNRNP48Q6IEG0 339 aaKnown RBP11.38□□□□□ -0.59
USP11-211ENST00000489111 MB21D1Q8N884 522 aa11.38□□□□□ -0.59
USP11-211ENST00000489111 ZNF579Q8NAF0 562 aaKnown RBP11.38□□□□□ -0.59
USP11-211ENST00000489111 CLIC6Q96NY7 704 aa11.38□□□□□ -0.59
USP11-211ENST00000489111 TEX13BQ9BXU2 312 aa11.38□□□□□ -0.59
USP11-211ENST00000489111 NUP62CLQ9H1M0 184 aa11.38□□□□□ -0.59
USP11-211ENST00000489111 GPBP1L1Q9HC44 474 aaPredicted RBP11.38□□□□□ -0.59
USP11-211ENST00000489111 A0A1B0GVL5 298 aa11.37□□□□□ -0.59
USP11-211ENST00000489111 VWA3AA6NCI4 1184 aa11.37□□□□□ -0.59
USP11-211ENST00000489111 NR1I2O75469 434 aa11.37□□□□□ -0.59
USP11-211ENST00000489111 LETM1O95202 739 aaPredicted RBP11.37□□□□□ -0.59
USP11-211ENST00000489111 CETPP11597 493 aa11.37□□□□□ -0.59
USP11-211ENST00000489111 PFKFB1P16118 471 aa11.37□□□□□ -0.59
USP11-211ENST00000489111 OSBPP22059 807 aa11.37□□□□□ -0.59
USP11-211ENST00000489111 HOXA7P31268 230 aaPredicted RBP11.37□□□□□ -0.59
USP11-211ENST00000489111 SREBF1P36956 1147 aa11.37□□□□□ -0.59
USP11-211ENST00000489111 PRPHP41219 470 aa11.37□□□□□ -0.59
USP11-211ENST00000489111 GTF2A2P52657 109 aa11.37□□□□□ -0.59
USP11-211ENST00000489111 ARHGAP4P98171 946 aa11.37□□□□□ -0.59
USP11-211ENST00000489111 PLS1Q14651 629 aa11.37□□□□□ -0.59
USP11-211ENST00000489111 CALCRLQ16602 461 aa11.37□□□□□ -0.59
USP11-211ENST00000489111 TKFCQ3LXA3 575 aa11.37□□□□□ -0.59
USP11-211ENST00000489111 SHC4Q6S5L8 630 aa11.37□□□□□ -0.59
USP11-211ENST00000489111 DTHD1Q6ZMT9 781 aa11.37□□□□□ -0.59
USP11-211ENST00000489111 FCHSD1Q86WN1 690 aa11.37□□□□□ -0.59
USP11-211ENST00000489111 WNK4Q96J92 1243 aa11.37□□□□□ -0.59
USP11-211ENST00000489111 TRERF1Q96PN7 1200 aa11.37□□□□□ -0.59
USP11-211ENST00000489111 CLSTN2Q9H4D0 955 aa11.37□□□□□ -0.59
USP11-211ENST00000489111 RNF146Q9NTX7 359 aa11.37□□□□□ -0.59
USP11-211ENST00000489111 DDX25Q9UHL0 483 aaKnown RBP11.37□□□□□ -0.59
USP11-211ENST00000489111 MRVI1Q9Y6F6 885 aa11.37□□□□□ -0.59
USP11-211ENST00000489111 OTOFQ9HC10 1997 aa11.37□□□□□ -0.59
USP11-211ENST00000489111 MYH6P13533 1939 aa11.37□□□□□ -0.59
USP11-211ENST00000489111 NFIBO00712 420 aa11.36□□□□□ -0.59
USP11-211ENST00000489111 ATP2A1O14983 1001 aa11.36□□□□□ -0.59
USP11-211ENST00000489111 MARCH6O60337 910 aa11.36□□□□□ -0.59
USP11-211ENST00000489111 TDP2O95551 362 aa11.36□□□□□ -0.59
USP11-211ENST00000489111 GJA5P36382 358 aa11.36□□□□□ -0.59
USP11-211ENST00000489111 LONP1P36776 959 aaKnown RBP11.36□□□□□ -0.59
USP11-211ENST00000489111 TXLNAP40222 546 aa11.36□□□□□ -0.59
USP11-211ENST00000489111 SYKP43405 635 aa11.36□□□□□ -0.59
USP11-211ENST00000489111 HSD17B4P51659 736 aa11.36□□□□□ -0.59
USP11-211ENST00000489111 USP11P51784 963 aa11.36□□□□□ -0.59
USP11-211ENST00000489111 NDUFA8P51970 172 aa11.36□□□□□ -0.59
USP11-211ENST00000489111 HUNKP57058 714 aa11.36□□□□□ -0.59
USP11-211ENST00000489111 TMEM266Q2M3C6 531 aa11.36□□□□□ -0.59
USP11-211ENST00000489111 PPP4R3AQ6IN85 833 aa11.36□□□□□ -0.59
USP11-211ENST00000489111 NSMFQ6X4W1 530 aa11.36□□□□□ -0.59
USP11-211ENST00000489111 SAMD3Q8N6K7 520 aa11.36□□□□□ -0.59
USP11-211ENST00000489111 REPS2Q8NFH8 660 aa11.36□□□□□ -0.59
USP11-211ENST00000489111 CLEC4DQ8WXI8 215 aa11.36□□□□□ -0.59
USP11-211ENST00000489111 CSRNP2Q9H175 543 aa11.36□□□□□ -0.59
USP11-211ENST00000489111 ASCC2Q9H1I8 757 aaPredicted RBP11.36□□□□□ -0.59
USP11-211ENST00000489111 TNMDQ9H2S6 317 aa11.36□□□□□ -0.59
USP11-211ENST00000489111 PNMA3Q9UL41 463 aa11.36□□□□□ -0.59
USP11-211ENST00000489111 ADAMTS5Q9UNA0 930 aa11.36□□□□□ -0.59
USP11-211ENST00000489111 CCL15-CCL14A0A0B4J2E2 113 aa11.35□□□□□ -0.59
USP11-211ENST00000489111 SYCE3A1L190 88 aa11.35□□□□□ -0.59
USP11-211ENST00000489111 CTAGE5O15320 804 aa11.35□□□□□ -0.59
USP11-211ENST00000489111 ITGBL1O95965 494 aaPredicted RBP11.35□□□□□ -0.59
USP11-211ENST00000489111 ZBTB48P10074 688 aaPredicted RBP11.35□□□□□ -0.59
USP11-211ENST00000489111 ZNF76P36508 570 aa11.35□□□□□ -0.59
USP11-211ENST00000489111 STAT3P40763 770 aa11.35□□□□□ -0.59
USP11-211ENST00000489111 HERVK_113P62684 666 aa11.35□□□□□ -0.59
USP11-211ENST00000489111 GRIN1Q05586 938 aa11.35□□□□□ -0.59
USP11-211ENST00000489111 MKRN3Q13064 507 aaKnown RBP11.35□□□□□ -0.59
USP11-211ENST00000489111 GSE1Q14687 1217 aa11.35□□□□□ -0.59
USP11-211ENST00000489111 TMEM132BQ14DG7 1078 aa11.35□□□□□ -0.59
USP11-211ENST00000489111 CCL15Q16663 113 aa11.35□□□□□ -0.59
USP11-211ENST00000489111 MUM1L1Q5H9M0 696 aa11.35□□□□□ -0.59
USP11-211ENST00000489111 SPECC1Q5M775 1068 aa11.35□□□□□ -0.59
USP11-211ENST00000489111 MOXD1Q6UVY6 613 aa11.35□□□□□ -0.59
USP11-211ENST00000489111 POTEDQ86YR6 584 aa11.35□□□□□ -0.59
USP11-211ENST00000489111 FMR1NBQ8N0W7 255 aaPredicted RBP11.35□□□□□ -0.59
USP11-211ENST00000489111 C4orf32Q8N8J7 132 aa11.35□□□□□ -0.59
USP11-211ENST00000489111 TMEM60Q9H2L4 133 aa11.35□□□□□ -0.59
USP11-211ENST00000489111 ACAD9Q9H845 621 aa11.35□□□□□ -0.59
USP11-211ENST00000489111 MAP3K20Q9NYL2 800 aaKnown RBP11.35□□□□□ -0.59
USP11-211ENST00000489111 ZNF214Q9UL59 606 aaPredicted RBP11.35□□□□□ -0.59
USP11-211ENST00000489111 KCNH3Q9ULD8 1083 aa11.35□□□□□ -0.59
USP11-211ENST00000489111 RABGAP1Q9Y3P9 1069 aa11.35□□□□□ -0.59
USP11-211ENST00000489111 BAZ2BQ9UIF8 2168 aaKnown RBP11.35□□□□□ -0.59
USP11-211ENST00000489111 FAM237AA0A1B0GTK4 181 aa11.34□□□□□ -0.59
USP11-211ENST00000489111 SLC37A4O43826 429 aa11.34□□□□□ -0.59
USP11-211ENST00000489111 COPB2P35606 906 aa11.34□□□□□ -0.59
USP11-211ENST00000489111 ZNF445P59923 1031 aa11.34□□□□□ -0.59
USP11-211ENST00000489111 GHRHRQ02643 423 aa11.34□□□□□ -0.59
USP11-211ENST00000489111 SNW1Q13573 536 aaKnown RBP11.34□□□□□ -0.59
USP11-211ENST00000489111 MOGSQ13724 837 aa11.34□□□□□ -0.59
USP11-211ENST00000489111 CAMK4Q16566 473 aa11.34□□□□□ -0.59
USP11-211ENST00000489111 SPRYD7Q5W111 196 aa11.34□□□□□ -0.59
USP11-211ENST00000489111 LBX2Q6XYB7 198 aa11.34□□□□□ -0.59
USP11-211ENST00000489111 RNF207Q6ZRF8 634 aa11.34□□□□□ -0.59
USP11-211ENST00000489111 SMC1BQ8NDV3 1235 aa11.34□□□□□ -0.59
USP11-211ENST00000489111 ENGASEQ8NFI3 743 aa11.34□□□□□ -0.59
USP11-211ENST00000489111 RASSF8Q8NHQ8 419 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms