RNA–Protein interactions for RNA: ENST00000488846.1

SMKR1-202, Transcript of small lysine rich protein 1, humanhuman

TSL 3

Gene SMKR1, Length 424 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-202ENST00000488846 ZNF713Q8N859 430 aaPredicted RBP10.26□□□□□ -0.77
SMKR1-202ENST00000488846 DDX11Q96FC9 970 aa10.26□□□□□ -0.77
SMKR1-202ENST00000488846 TINF2Q9BSI4 451 aa10.26□□□□□ -0.77
SMKR1-202ENST00000488846 UPF2Q9HAU5 1272 aaKnown RBP10.26□□□□□ -0.77
SMKR1-202ENST00000488846 PAK6Q9NQU5 681 aaPredicted RBP10.26□□□□□ -0.77
SMKR1-202ENST00000488846 RPTORQ8N122 1335 aa10.26□□□□□ -0.77
SMKR1-202ENST00000488846 RBBP6Q7Z6E9 1792 aaKnown RBP10.26□□□□□ -0.77
SMKR1-202ENST00000488846 POTEB2H3BUK9 544 aa10.25□□□□□ -0.77
SMKR1-202ENST00000488846 PRPF3O43395 683 aaKnown RBP10.25□□□□□ -0.77
SMKR1-202ENST00000488846 SNAI1O95863 264 aaPredicted RBP10.25□□□□□ -0.77
SMKR1-202ENST00000488846 CYBAP13498 195 aa10.25□□□□□ -0.77
SMKR1-202ENST00000488846 PRKAR2AP13861 404 aaKnown RBP10.25□□□□□ -0.77
SMKR1-202ENST00000488846 CAPN2P17655 700 aa10.25□□□□□ -0.77
SMKR1-202ENST00000488846 EDNRBP24530 442 aa10.25□□□□□ -0.77
SMKR1-202ENST00000488846 SLC4A3P48751 1232 aa10.25□□□□□ -0.77
SMKR1-202ENST00000488846 RPS6P62753 249 aaKnown RBP10.25□□□□□ -0.77
SMKR1-202ENST00000488846 RABEP1Q15276 862 aa10.25□□□□□ -0.77
SMKR1-202ENST00000488846 MTFR1Q15390 333 aa10.25□□□□□ -0.77
SMKR1-202ENST00000488846 PKN1Q16512 942 aa10.25□□□□□ -0.77
SMKR1-202ENST00000488846 MFSD14CQ5VZR4 134 aa10.25□□□□□ -0.77
SMKR1-202ENST00000488846 NSMFQ6X4W1 530 aa10.25□□□□□ -0.77
SMKR1-202ENST00000488846 RNF207Q6ZRF8 634 aa10.25□□□□□ -0.77
SMKR1-202ENST00000488846 DNERQ8NFT8 737 aa10.25□□□□□ -0.77
SMKR1-202ENST00000488846 TBC1D5Q92609 795 aa10.25□□□□□ -0.77
SMKR1-202ENST00000488846 RNF26Q9BY78 433 aaPredicted RBP10.25□□□□□ -0.77
SMKR1-202ENST00000488846 RBM27Q9P2N5 1060 aaKnown RBP10.25□□□□□ -0.77
SMKR1-202ENST00000488846 SEC63Q9UGP8 760 aaKnown RBP10.25□□□□□ -0.77
SMKR1-202ENST00000488846 V9GY48 417 aaPredicted RBP10.25□□□□□ -0.77
SMKR1-202ENST00000488846 PTPDC1A2A3K4 754 aa10.24□□□□□ -0.77
SMKR1-202ENST00000488846 ASB14A6NK59 587 aa10.24□□□□□ -0.77
SMKR1-202ENST00000488846 PIK3CDO00329 1044 aa10.24□□□□□ -0.77
SMKR1-202ENST00000488846 ZNF865P0CJ78 1059 aaPredicted RBP10.24□□□□□ -0.77
SMKR1-202ENST00000488846 CCL5P13501 91 aa10.24□□□□□ -0.77
SMKR1-202ENST00000488846 CYP2C19P33261 490 aa10.24□□□□□ -0.77
SMKR1-202ENST00000488846 CCT2P78371 535 aaKnown RBP10.24□□□□□ -0.77
SMKR1-202ENST00000488846 SCRN1Q12765 414 aa10.24□□□□□ -0.77
SMKR1-202ENST00000488846 ME3Q16798 604 aa10.24□□□□□ -0.77
SMKR1-202ENST00000488846 PFKFB3Q16875 520 aaPredicted RBP10.24□□□□□ -0.77
SMKR1-202ENST00000488846 WWC2Q6AWC2 1192 aa10.24□□□□□ -0.77
SMKR1-202ENST00000488846 PPP1R18Q6NYC8 613 aa10.24□□□□□ -0.77
SMKR1-202ENST00000488846 SLC30A10Q6XR72 485 aa10.24□□□□□ -0.77
SMKR1-202ENST00000488846 CCDC82Q8N4S0 544 aa10.24□□□□□ -0.77
SMKR1-202ENST00000488846 TRPV1Q8NER1 839 aa10.24□□□□□ -0.77
SMKR1-202ENST00000488846 SYTL5Q8TDW5 730 aaPredicted RBP10.24□□□□□ -0.77
SMKR1-202ENST00000488846 LARP6Q9BRS8 491 aaKnown RBP10.24□□□□□ -0.77
SMKR1-202ENST00000488846 KATNBL1Q9H079 304 aa10.24□□□□□ -0.77
SMKR1-202ENST00000488846 UNC93B1Q9H1C4 597 aa10.24□□□□□ -0.77
SMKR1-202ENST00000488846 NCOA5Q9HCD5 579 aaKnown RBP10.24□□□□□ -0.77
SMKR1-202ENST00000488846 COL20A1Q9P218 1284 aa10.24□□□□□ -0.77
SMKR1-202ENST00000488846 KIAA0100Q14667 2235 aaKnown RBP10.23□□□□□ -0.77
SMKR1-202ENST00000488846 hCG_1642624A0A1W2PR95 340 aa10.23□□□□□ -0.77
SMKR1-202ENST00000488846 STXBP3O00186 592 aa10.23□□□□□ -0.77
SMKR1-202ENST00000488846 MEIS2O14770 477 aa10.23□□□□□ -0.77
SMKR1-202ENST00000488846 LARGE1O95461 756 aa10.23□□□□□ -0.77
SMKR1-202ENST00000488846 CTDNEP1O95476 244 aa10.23□□□□□ -0.77
SMKR1-202ENST00000488846 GJB1P08034 283 aa10.23□□□□□ -0.77
SMKR1-202ENST00000488846 GJA8P48165 433 aa10.23□□□□□ -0.77
SMKR1-202ENST00000488846 ALDH5A1P51649 535 aaPredicted RBP10.23□□□□□ -0.77
SMKR1-202ENST00000488846 LHX8Q68G74 356 aa10.23□□□□□ -0.77
SMKR1-202ENST00000488846 TYW1BQ6NUM6 668 aa10.23□□□□□ -0.77
SMKR1-202ENST00000488846 ARMCX2Q7L311 632 aa10.23□□□□□ -0.77
SMKR1-202ENST00000488846 FAM177A1Q8N128 213 aaPredicted RBP10.23□□□□□ -0.77
SMKR1-202ENST00000488846 GTF3C6Q969F1 213 aa10.23□□□□□ -0.77
SMKR1-202ENST00000488846 PURBQ96QR8 312 aaKnown RBP10.23□□□□□ -0.77
SMKR1-202ENST00000488846 CRISPLD2Q9H0B8 497 aa10.23□□□□□ -0.77
SMKR1-202ENST00000488846 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.23□□□□□ -0.77
SMKR1-202ENST00000488846 SLKQ9H2G2 1235 aaPredicted RBP10.23□□□□□ -0.77
SMKR1-202ENST00000488846 ABHD16BQ9H3Z7 469 aa10.23□□□□□ -0.77
SMKR1-202ENST00000488846 HMX1Q9NP08 348 aaPredicted RBP10.23□□□□□ -0.77
SMKR1-202ENST00000488846 BARHL2Q9NY43 387 aa10.23□□□□□ -0.77
SMKR1-202ENST00000488846 BIN2Q9UBW5 565 aaPredicted RBP10.23□□□□□ -0.77
SMKR1-202ENST00000488846 ADD3Q9UEY8 706 aaKnown RBP10.23□□□□□ -0.77
SMKR1-202ENST00000488846 NAP1L2Q9ULW6 460 aaPredicted RBP10.23□□□□□ -0.77
SMKR1-202ENST00000488846 FRMPD4Q14CM0 1322 aa10.23□□□□□ -0.77
SMKR1-202ENST00000488846 LRRC37A2A6NM11 1700 aa10.22□□□□□ -0.77
SMKR1-202ENST00000488846 ESYT2A0FGR8 921 aa10.22□□□□□ -0.77
SMKR1-202ENST00000488846 GCOM1H8Y6P7 765 aaPredicted RBP10.22□□□□□ -0.77
SMKR1-202ENST00000488846 SEPT4O43236 478 aa10.22□□□□□ -0.77
SMKR1-202ENST00000488846 CFBP00751 764 aa10.22□□□□□ -0.77
SMKR1-202ENST00000488846 POLR2MP0CAP2 368 aa10.22□□□□□ -0.77
SMKR1-202ENST00000488846 SCG2P13521 617 aa10.22□□□□□ -0.77
SMKR1-202ENST00000488846 CALML3P27482 149 aa10.22□□□□□ -0.77
SMKR1-202ENST00000488846 CCND3P30281 292 aaPredicted RBP10.22□□□□□ -0.77
SMKR1-202ENST00000488846 ST3GAL1Q11201 340 aa10.22□□□□□ -0.77
SMKR1-202ENST00000488846 NSUN6Q8TEA1 469 aaKnown RBP10.22□□□□□ -0.77
SMKR1-202ENST00000488846 PIBF1Q8WXW3 757 aa10.22□□□□□ -0.77
SMKR1-202ENST00000488846 PHKBQ93100 1093 aa10.22□□□□□ -0.77
SMKR1-202ENST00000488846 TAAR1Q96RJ0 339 aa10.22□□□□□ -0.77
SMKR1-202ENST00000488846 IWS1Q96ST2 819 aa10.22□□□□□ -0.77
SMKR1-202ENST00000488846 RNF208Q9H0X6 261 aa10.22□□□□□ -0.77
SMKR1-202ENST00000488846 SH3GLB2Q9NR46 395 aa10.22□□□□□ -0.77
SMKR1-202ENST00000488846 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.22□□□□□ -0.77
SMKR1-202ENST00000488846 LIMCH1Q9UPQ0 1083 aa10.22□□□□□ -0.77
SMKR1-202ENST00000488846 STK36Q9NRP7 1315 aa10.22□□□□□ -0.77
SMKR1-202ENST00000488846 RBM47A0AV96 593 aaKnown RBP10.21□□□□□ -0.77
SMKR1-202ENST00000488846 POTEFA5A3E0 1075 aa10.21□□□□□ -0.77
SMKR1-202ENST00000488846 CCDC85CA6NKD9 419 aa10.21□□□□□ -0.77
SMKR1-202ENST00000488846 MSCO60682 206 aa10.21□□□□□ -0.77
SMKR1-202ENST00000488846 SGPL1O95470 568 aa10.21□□□□□ -0.77
SMKR1-202ENST00000488846 RGS19P49795 217 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms