RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 ENGASEQ8NFI3 743 aa14.51□□□□□ -0.09
NELFE-209ENST00000488426 CCDC194A0A1B0GVG4 234 aa14.5□□□□□ -0.09
NELFE-209ENST00000488426 SMCO2A6NFE2 343 aa14.5□□□□□ -0.09
NELFE-209ENST00000488426 CTAGE5O15320 804 aa14.5□□□□□ -0.09
NELFE-209ENST00000488426 RAD21O60216 631 aa14.5□□□□□ -0.09
NELFE-209ENST00000488426 BTNL9Q6UXG8 535 aa14.5□□□□□ -0.09
NELFE-209ENST00000488426 KRT25Q7Z3Z0 450 aa14.5□□□□□ -0.09
NELFE-209ENST00000488426 TNMDQ9H2S6 317 aa14.5□□□□□ -0.09
NELFE-209ENST00000488426 GRPEL1Q9HAV7 217 aa14.5□□□□□ -0.09
NELFE-209ENST00000488426 ZCCHC17Q9NP64 241 aaKnown RBP14.5□□□□□ -0.09
NELFE-209ENST00000488426 PCDHA6Q9UN73 950 aa14.5□□□□□ -0.09
NELFE-209ENST00000488426 PCDHA8Q9Y5H6 950 aa14.5□□□□□ -0.09
NELFE-209ENST00000488426 FAM237AA0A1B0GTK4 181 aa14.5□□□□□ -0.09
NELFE-209ENST00000488426 KINO60870 393 aaKnown RBP14.5□□□□□ -0.09
NELFE-209ENST00000488426 PTPREP23469 700 aa14.5□□□□□ -0.09
NELFE-209ENST00000488426 SLC16A2P36021 539 aa14.5□□□□□ -0.09
NELFE-209ENST00000488426 LACTBP83111 547 aaPredicted RBP14.5□□□□□ -0.09
NELFE-209ENST00000488426 SNW1Q13573 536 aaKnown RBP14.5□□□□□ -0.09
NELFE-209ENST00000488426 RBM43Q6ZSC3 357 aaKnown RBP14.5□□□□□ -0.09
NELFE-209ENST00000488426 FMR1NBQ8N0W7 255 aaPredicted RBP14.5□□□□□ -0.09
NELFE-209ENST00000488426 ZNF579Q8NAF0 562 aaKnown RBP14.5□□□□□ -0.09
NELFE-209ENST00000488426 TSPY26PQ9H489 355 aa14.5□□□□□ -0.09
NELFE-209ENST00000488426 USP17L10C9JJH3 530 aa14.49□□□□□ -0.09
NELFE-209ENST00000488426 HMGCS2P54868 508 aa14.49□□□□□ -0.09
NELFE-209ENST00000488426 ZNF280CQ8ND82 737 aa14.49□□□□□ -0.09
NELFE-209ENST00000488426 ACER1Q8TDN7 264 aa14.49□□□□□ -0.09
NELFE-209ENST00000488426 VCPKMTQ9H867 229 aa14.49□□□□□ -0.09
NELFE-209ENST00000488426 FBXO2Q9UK22 296 aaPredicted RBP14.49□□□□□ -0.09
NELFE-209ENST00000488426 SRPRBQ9Y5M8 271 aaKnown RBP14.49□□□□□ -0.09
NELFE-209ENST00000488426 PTCH2Q9Y6C5 1203 aa14.49□□□□□ -0.09
NELFE-209ENST00000488426 ADAMTS3O15072 1205 aa14.48□□□□□ -0.09
NELFE-209ENST00000488426 PEX10O60683 326 aa14.48□□□□□ -0.09
NELFE-209ENST00000488426 BCRP11274 1271 aa14.48□□□□□ -0.09
NELFE-209ENST00000488426 ATP2B1P20020 1258 aa14.48□□□□□ -0.09
NELFE-209ENST00000488426 ADCY7P51828 1080 aa14.48□□□□□ -0.09
NELFE-209ENST00000488426 SYDE2Q5VT97 1194 aa14.48□□□□□ -0.09
NELFE-209ENST00000488426 RESP18Q5W5W9 173 aa14.48□□□□□ -0.09
NELFE-209ENST00000488426 FASTKD5Q7L8L6 764 aaKnown RBP14.48□□□□□ -0.09
NELFE-209ENST00000488426 REXO1Q8N1G1 1221 aaKnown RBP14.48□□□□□ -0.09
NELFE-209ENST00000488426 FERMT2Q96AC1 680 aa14.48□□□□□ -0.09
NELFE-209ENST00000488426 TRIM47Q96LD4 638 aa14.48□□□□□ -0.09
NELFE-209ENST00000488426 GLT8D2Q9H1C3 349 aa14.48□□□□□ -0.09
NELFE-209ENST00000488426 A0A1B0GVL5 298 aa14.48□□□□□ -0.09
NELFE-209ENST00000488426 PLA2G6O60733 806 aa14.48□□□□□ -0.09
NELFE-209ENST00000488426 PPP1R11O60927 126 aaPredicted RBP14.48□□□□□ -0.09
NELFE-209ENST00000488426 PFKFB1P16118 471 aa14.48□□□□□ -0.09
NELFE-209ENST00000488426 NDUFA8P51970 172 aa14.48□□□□□ -0.09
NELFE-209ENST00000488426 CDC37Q16543 378 aaPredicted RBP14.48□□□□□ -0.09
NELFE-209ENST00000488426 QRICH1Q2TAL8 776 aa14.48□□□□□ -0.09
NELFE-209ENST00000488426 SHC4Q6S5L8 630 aa14.48□□□□□ -0.09
NELFE-209ENST00000488426 RASGRP4Q8TDF6 673 aa14.48□□□□□ -0.09
NELFE-209ENST00000488426 COA7Q96BR5 231 aa14.48□□□□□ -0.09
NELFE-209ENST00000488426 NUP88Q99567 741 aaPredicted RBP14.48□□□□□ -0.09
NELFE-209ENST00000488426 RIC8AQ9NPQ8 531 aa14.48□□□□□ -0.09
NELFE-209ENST00000488426 HPSEQ9Y251 543 aa14.48□□□□□ -0.09
NELFE-209ENST00000488426 POTEFA5A3E0 1075 aa14.47□□□□□ -0.09
NELFE-209ENST00000488426 TMEM232C9JQI7 657 aa14.47□□□□□ -0.09
NELFE-209ENST00000488426 MYCP01106 439 aaPredicted RBP14.47□□□□□ -0.09
NELFE-209ENST00000488426 PSMC4P43686 418 aa14.47□□□□□ -0.09
NELFE-209ENST00000488426 ATP2C1P98194 919 aaPredicted RBP14.47□□□□□ -0.09
NELFE-209ENST00000488426 MLLT1Q03111 559 aaPredicted RBP14.47□□□□□ -0.09
NELFE-209ENST00000488426 IKQ13123 557 aaPredicted RBP14.47□□□□□ -0.09
NELFE-209ENST00000488426 NONOQ15233 471 aaKnown RBP eCLIP14.47□□□□□ -0.09
NELFE-209ENST00000488426 FUCA2Q9BTY2 467 aa14.47□□□□□ -0.09
NELFE-209ENST00000488426 DOCK3Q8IZD9 2030 aa14.47□□□□□ -0.09
NELFE-209ENST00000488426 CCDC192P0DO97 292 aa14.46□□□□□ -0.09
NELFE-209ENST00000488426 STAT2P52630 851 aa14.46□□□□□ -0.09
NELFE-209ENST00000488426 TRAF1Q13077 416 aa14.46□□□□□ -0.09
NELFE-209ENST00000488426 ORC2Q13416 577 aaPredicted RBP14.46□□□□□ -0.09
NELFE-209ENST00000488426 MTMR2Q13614 643 aa14.46□□□□□ -0.09
NELFE-209ENST00000488426 ZNF174Q15697 407 aa14.46□□□□□ -0.09
NELFE-209ENST00000488426 CAMK4Q16566 473 aa14.46□□□□□ -0.09
NELFE-209ENST00000488426 CUL5Q93034 780 aa14.46□□□□□ -0.09
NELFE-209ENST00000488426 TIGD1Q96MW7 591 aa14.46□□□□□ -0.09
NELFE-209ENST00000488426 CLIC6Q96NY7 704 aa14.46□□□□□ -0.09
NELFE-209ENST00000488426 FAM13BQ9NYF5 915 aa14.46□□□□□ -0.09
NELFE-209ENST00000488426 AGTPBP1Q9UPW5 1226 aa14.46□□□□□ -0.09
NELFE-209ENST00000488426 WNT7AO00755 349 aa14.46□□□□□ -0.1
NELFE-209ENST00000488426 MRPL12P52815 198 aaKnown RBP14.46□□□□□ -0.1
NELFE-209ENST00000488426 ARL6IP4Q66PJ3 421 aaKnown RBP14.46□□□□□ -0.1
NELFE-209ENST00000488426 FAM160B2Q86V87 743 aa14.46□□□□□ -0.1
NELFE-209ENST00000488426 TEX2Q8IWB9 1127 aa14.46□□□□□ -0.1
NELFE-209ENST00000488426 SPICE1Q8N0Z3 855 aa14.46□□□□□ -0.1
NELFE-209ENST00000488426 SH3TC2Q8TF17 1288 aa14.46□□□□□ -0.1
NELFE-209ENST00000488426 CHURC1Q8WUH1 139 aa14.46□□□□□ -0.1
NELFE-209ENST00000488426 PARK7Q99497 189 aaKnown RBP14.46□□□□□ -0.1
NELFE-209ENST00000488426 FEZ1Q99689 392 aa14.46□□□□□ -0.1
NELFE-209ENST00000488426 AMNQ9BXJ7 453 aa14.46□□□□□ -0.1
NELFE-209ENST00000488426 KIAA1683Q9H0B3 1180 aa14.46□□□□□ -0.1
NELFE-209ENST00000488426 ZNF202O95125 648 aa14.45□□□□□ -0.1
NELFE-209ENST00000488426 XRCC6P12956 609 aaKnown RBP eCLIP14.45□□□□□ -0.1
NELFE-209ENST00000488426 SYKP43405 635 aa14.45□□□□□ -0.1
NELFE-209ENST00000488426 BACE1P56817 501 aa14.45□□□□□ -0.1
NELFE-209ENST00000488426 PTGDRQ13258 359 aa14.45□□□□□ -0.1
NELFE-209ENST00000488426 INF2Q27J81 1249 aa14.45□□□□□ -0.1
NELFE-209ENST00000488426 SH3D19Q5HYK7 790 aa14.45□□□□□ -0.1
NELFE-209ENST00000488426 KIAA1755Q5JYT7 1200 aa14.45□□□□□ -0.1
NELFE-209ENST00000488426 FAM83BQ5T0W9 1011 aa14.45□□□□□ -0.1
NELFE-209ENST00000488426 PDE4DIPQ5VU43 2346 aa14.45□□□□□ -0.1
NELFE-209ENST00000488426 POTEEQ6S8J3 1075 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms