RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 PUM3Q15397 648 aaKnown RBP7.33□□□□□ -1.24
CDHR3-213ENST00000488386 PCSK7Q16549 785 aa7.33□□□□□ -1.24
CDHR3-213ENST00000488386 CAVIN4Q5BKX8 364 aa7.33□□□□□ -1.24
CDHR3-213ENST00000488386 INTS3Q68E01 1043 aaKnown RBP7.33□□□□□ -1.24
CDHR3-213ENST00000488386 ELMSAN1Q6PJG2 1045 aa7.33□□□□□ -1.24
CDHR3-213ENST00000488386 ATF7IPQ6VMQ6 1270 aa7.33□□□□□ -1.24
CDHR3-213ENST00000488386 DZIP1LQ8IYY4 767 aaKnown RBP7.33□□□□□ -1.24
CDHR3-213ENST00000488386 PLD4Q96BZ4 506 aa7.33□□□□□ -1.24
CDHR3-213ENST00000488386 CLMNQ96JQ2 1002 aa7.33□□□□□ -1.24
CDHR3-213ENST00000488386 CITED4Q96RK1 184 aa7.33□□□□□ -1.24
CDHR3-213ENST00000488386 NIF3L1Q9GZT8 377 aa7.33□□□□□ -1.24
CDHR3-213ENST00000488386 TMEM39BQ9GZU3 492 aa7.33□□□□□ -1.24
CDHR3-213ENST00000488386 GZF1Q9H116 711 aaPredicted RBP7.33□□□□□ -1.24
CDHR3-213ENST00000488386 PRDM6Q9NQX0 595 aa7.33□□□□□ -1.24
CDHR3-213ENST00000488386 LATS2Q9NRM7 1088 aa7.33□□□□□ -1.24
CDHR3-213ENST00000488386 RNF186Q9NXI6 227 aa7.33□□□□□ -1.24
CDHR3-213ENST00000488386 FRRS1LQ9P0K9 344 aa7.33□□□□□ -1.24
CDHR3-213ENST00000488386 ZNF70Q9UC06 446 aaPredicted RBP7.33□□□□□ -1.24
CDHR3-213ENST00000488386 MKL2Q9ULH7 1088 aa7.33□□□□□ -1.24
CDHR3-213ENST00000488386 RGS9O75916 674 aaPredicted RBP7.32□□□□□ -1.24
CDHR3-213ENST00000488386 TBC1D8O95759 1140 aa7.32□□□□□ -1.24
CDHR3-213ENST00000488386 COL8A1P27658 744 aa7.32□□□□□ -1.24
CDHR3-213ENST00000488386 NF2P35240 595 aa7.32□□□□□ -1.24
CDHR3-213ENST00000488386 IRS1P35568 1242 aa7.32□□□□□ -1.24
CDHR3-213ENST00000488386 TIMM10P62072 90 aa7.32□□□□□ -1.24
CDHR3-213ENST00000488386 FKBP1AP62942 108 aaKnown RBP7.32□□□□□ -1.24
CDHR3-213ENST00000488386 TFCP2Q12800 502 aa7.32□□□□□ -1.24
CDHR3-213ENST00000488386 ATP2B3Q16720 1220 aa7.32□□□□□ -1.24
CDHR3-213ENST00000488386 NCAPG2Q86XI2 1143 aa7.32□□□□□ -1.24
CDHR3-213ENST00000488386 CEP120Q8N960 986 aa7.32□□□□□ -1.24
CDHR3-213ENST00000488386 LPIN2Q92539 896 aa7.32□□□□□ -1.24
CDHR3-213ENST00000488386 SCARF2Q96GP6 870 aaPredicted RBP7.32□□□□□ -1.24
CDHR3-213ENST00000488386 HHIPQ96QV1 700 aa7.32□□□□□ -1.24
CDHR3-213ENST00000488386 RASSF4Q9H2L5 321 aa7.32□□□□□ -1.24
CDHR3-213ENST00000488386 ZFYVE28Q9HCC9 887 aa7.32□□□□□ -1.24
CDHR3-213ENST00000488386 TRIM33Q9UPN9 1127 aa7.32□□□□□ -1.24
CDHR3-213ENST00000488386 GNB5O14775 395 aa7.31□□□□□ -1.24
CDHR3-213ENST00000488386 MYO1BO43795 1136 aa7.31□□□□□ -1.24
CDHR3-213ENST00000488386 LILRB5O75023 590 aa7.31□□□□□ -1.24
CDHR3-213ENST00000488386 USP2O75604 605 aaPredicted RBP7.31□□□□□ -1.24
CDHR3-213ENST00000488386 GHRHP01286 108 aa7.31□□□□□ -1.24
CDHR3-213ENST00000488386 PRDX5P30044 214 aa7.31□□□□□ -1.24
CDHR3-213ENST00000488386 PEAR1Q5VY43 1037 aaPredicted RBP7.31□□□□□ -1.24
CDHR3-213ENST00000488386 ZKSCAN2Q63HK3 967 aa7.31□□□□□ -1.24
CDHR3-213ENST00000488386 PI16Q6UXB8 463 aa7.31□□□□□ -1.24
CDHR3-213ENST00000488386 ARMC9Q7Z3E5 817 aa7.31□□□□□ -1.24
CDHR3-213ENST00000488386 BEND7Q8N7W2 519 aaPredicted RBP7.31□□□□□ -1.24
CDHR3-213ENST00000488386 ARHGAP45Q92619 1136 aa7.31□□□□□ -1.24
CDHR3-213ENST00000488386 ABHD8Q96I13 439 aa7.31□□□□□ -1.24
CDHR3-213ENST00000488386 TEPSINQ96N21 525 aa7.31□□□□□ -1.24
CDHR3-213ENST00000488386 R3HDMLQ9H3Y0 253 aa7.31□□□□□ -1.24
CDHR3-213ENST00000488386 COPRSQ9NQ92 184 aa7.31□□□□□ -1.24
CDHR3-213ENST00000488386 A0A1B0GUL7 405 aa7.3□□□□□ -1.24
CDHR3-213ENST00000488386 CCDC85CA6NKD9 419 aa7.3□□□□□ -1.24
CDHR3-213ENST00000488386 IPO8O15397 1037 aaKnown RBP7.3□□□□□ -1.24
CDHR3-213ENST00000488386 CIAO1O76071 339 aa7.3□□□□□ -1.24
CDHR3-213ENST00000488386 GNAI2P04899 355 aa7.3□□□□□ -1.24
CDHR3-213ENST00000488386 GNAI3P08754 354 aa7.3□□□□□ -1.24
CDHR3-213ENST00000488386 IL15P40933 162 aaPredicted RBP7.3□□□□□ -1.24
CDHR3-213ENST00000488386 FKBP1BP68106 108 aa7.3□□□□□ -1.24
CDHR3-213ENST00000488386 DSC3Q14574 896 aa7.3□□□□□ -1.24
CDHR3-213ENST00000488386 LDLRAD1Q5T700 205 aa7.3□□□□□ -1.24
CDHR3-213ENST00000488386 APOBEC3HQ6NTF7 200 aaKnown RBP7.3□□□□□ -1.24
CDHR3-213ENST00000488386 ITPRIPQ8IWB1 547 aa7.3□□□□□ -1.24
CDHR3-213ENST00000488386 PANK1Q8TE04 598 aa7.3□□□□□ -1.24
CDHR3-213ENST00000488386 TEKT1Q969V4 418 aa7.3□□□□□ -1.24
CDHR3-213ENST00000488386 ALKBH8Q96BT7 664 aaKnown RBP7.3□□□□□ -1.24
CDHR3-213ENST00000488386 DMRTB1Q96MA1 342 aa7.3□□□□□ -1.24
CDHR3-213ENST00000488386 NEUROD6Q96NK8 337 aa7.3□□□□□ -1.24
CDHR3-213ENST00000488386 ASB16Q96NS5 453 aa7.3□□□□□ -1.24
CDHR3-213ENST00000488386 MCOLN1Q9GZU1 580 aa7.3□□□□□ -1.24
CDHR3-213ENST00000488386 ZBED9Q6R2W3 1325 aa7.29□□□□□ -1.24
CDHR3-213ENST00000488386 AK9Q5TCS8 1911 aa7.29□□□□□ -1.24
CDHR3-213ENST00000488386 MYH2Q9UKX2 1941 aa7.29□□□□□ -1.24
CDHR3-213ENST00000488386 FAM229AH3BQW9 127 aa7.29□□□□□ -1.24
CDHR3-213ENST00000488386 EIF1AYO14602 144 aaKnown RBP7.29□□□□□ -1.24
CDHR3-213ENST00000488386 TREHO43280 583 aa7.29□□□□□ -1.24
CDHR3-213ENST00000488386 TCP10Q12799 353 aa7.29□□□□□ -1.24
CDHR3-213ENST00000488386 NFIAQ12857 509 aa7.29□□□□□ -1.24
CDHR3-213ENST00000488386 RASGRF1Q13972 1273 aa7.29□□□□□ -1.24
CDHR3-213ENST00000488386 MIGA2Q7L4E1 593 aa7.29□□□□□ -1.24
CDHR3-213ENST00000488386 ZFPM1Q8IX07 1006 aa7.29□□□□□ -1.24
CDHR3-213ENST00000488386 FTSJ3Q8IY81 847 aaKnown RBP7.29□□□□□ -1.24
CDHR3-213ENST00000488386 TBC1D22AQ8WUA7 517 aa7.29□□□□□ -1.24
CDHR3-213ENST00000488386 WNK4Q96J92 1243 aa7.29□□□□□ -1.24
CDHR3-213ENST00000488386 ZKSCAN3Q9BRR0 538 aa7.29□□□□□ -1.24
CDHR3-213ENST00000488386 PLVAPQ9BX97 442 aa7.29□□□□□ -1.24
CDHR3-213ENST00000488386 BCL11AQ9H165 835 aa7.29□□□□□ -1.24
CDHR3-213ENST00000488386 DZANK1Q9NVP4 752 aa7.29□□□□□ -1.24
CDHR3-213ENST00000488386 ABCF2Q9UG63 623 aa7.29□□□□□ -1.24
CDHR3-213ENST00000488386 DAGLAQ9Y4D2 1042 aa7.29□□□□□ -1.24
CDHR3-213ENST00000488386 MYO5AQ9Y4I1 1855 aaKnown RBP7.28□□□□□ -1.24
CDHR3-213ENST00000488386 IGF2BP3O00425 579 aaKnown RBP eCLIP7.28□□□□□ -1.24
CDHR3-213ENST00000488386 CA12O43570 354 aa7.28□□□□□ -1.24
CDHR3-213ENST00000488386 IREB2P48200 963 aaKnown RBP7.28□□□□□ -1.24
CDHR3-213ENST00000488386 MMP14P50281 582 aa7.28□□□□□ -1.24
CDHR3-213ENST00000488386 MTX1Q13505 466 aa7.28□□□□□ -1.24
CDHR3-213ENST00000488386 MAP3K11Q16584 847 aa7.28□□□□□ -1.24
CDHR3-213ENST00000488386 SUPT20HL1Q3ZLR7 823 aa7.28□□□□□ -1.24
CDHR3-213ENST00000488386 CEP135Q66GS9 1140 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms