RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 PTPRAP18433 802 aa15.48■□□□□ 0.07
COPS7B-221ENST00000488111 SPP2Q13103 211 aa15.48■□□□□ 0.07
COPS7B-221ENST00000488111 ADGRF4Q8IZF3 695 aa15.48■□□□□ 0.07
COPS7B-221ENST00000488111 EXOC4Q96A65 974 aa15.48■□□□□ 0.07
COPS7B-221ENST00000488111 ZNF408Q9H9D4 720 aa15.48■□□□□ 0.07
COPS7B-221ENST00000488111 GOPCQ9HD26 462 aa15.48■□□□□ 0.07
COPS7B-221ENST00000488111 ZHX2Q9Y6X8 837 aa15.48■□□□□ 0.07
COPS7B-221ENST00000488111 USP17L10C9JJH3 530 aa15.47■□□□□ 0.07
COPS7B-221ENST00000488111 SMC2O95347 1197 aa15.47■□□□□ 0.07
COPS7B-221ENST00000488111 BMP3P12645 472 aa15.47■□□□□ 0.07
COPS7B-221ENST00000488111 CASQ1P31415 396 aa15.47■□□□□ 0.07
COPS7B-221ENST00000488111 TNNT3P45378 269 aaPredicted RBP15.47■□□□□ 0.07
COPS7B-221ENST00000488111 CEBPZQ03701 1054 aaKnown RBP15.47■□□□□ 0.07
COPS7B-221ENST00000488111 IKQ13123 557 aaPredicted RBP15.47■□□□□ 0.07
COPS7B-221ENST00000488111 FAM83BQ5T0W9 1011 aa15.47■□□□□ 0.07
COPS7B-221ENST00000488111 SAMD1Q6SPF0 538 aaPredicted RBP15.47■□□□□ 0.07
COPS7B-221ENST00000488111 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.47■□□□□ 0.07
COPS7B-221ENST00000488111 GMCL1Q96IK5 515 aa15.47■□□□□ 0.07
COPS7B-221ENST00000488111 CARD6Q9BX69 1037 aa15.47■□□□□ 0.07
COPS7B-221ENST00000488111 RIOX1Q9H6W3 641 aa15.47■□□□□ 0.07
COPS7B-221ENST00000488111 VCPKMTQ9H867 229 aa15.47■□□□□ 0.07
COPS7B-221ENST00000488111 JMJD4Q9H9V9 463 aa15.47■□□□□ 0.07
COPS7B-221ENST00000488111 ZCCHC17Q9NP64 241 aaKnown RBP15.47■□□□□ 0.07
COPS7B-221ENST00000488111 LCMT1Q9UIC8 334 aa15.47■□□□□ 0.07
COPS7B-221ENST00000488111 SNAP25P60880 206 aa15.47■□□□□ 0.07
COPS7B-221ENST00000488111 MAP3K9P80192 1104 aa15.47■□□□□ 0.07
COPS7B-221ENST00000488111 VGLL4Q14135 290 aa15.47■□□□□ 0.07
COPS7B-221ENST00000488111 HEATR3Q7Z4Q2 680 aa15.47■□□□□ 0.07
COPS7B-221ENST00000488111 GPR161Q8N6U8 529 aaKnown RBP15.47■□□□□ 0.07
COPS7B-221ENST00000488111 FSIP1Q8NA03 581 aa15.47■□□□□ 0.07
COPS7B-221ENST00000488111 RRP36Q96EU6 259 aaKnown RBP15.47■□□□□ 0.07
COPS7B-221ENST00000488111 TRIM75PA6NK02 468 aa15.46■□□□□ 0.07
COPS7B-221ENST00000488111 NF2P35240 595 aa15.46■□□□□ 0.07
COPS7B-221ENST00000488111 KIF23Q02241 960 aaPredicted RBP15.46■□□□□ 0.07
COPS7B-221ENST00000488111 MTMR2Q13614 643 aa15.46■□□□□ 0.07
COPS7B-221ENST00000488111 SRLQ86TD4 932 aa15.46■□□□□ 0.07
COPS7B-221ENST00000488111 USP28Q96RU2 1077 aa15.46■□□□□ 0.07
COPS7B-221ENST00000488111 FTOQ9C0B1 505 aaKnown RBP eCLIP15.46■□□□□ 0.07
COPS7B-221ENST00000488111 MYH15Q9Y2K3 1946 aa15.46■□□□□ 0.06
COPS7B-221ENST00000488111 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.46■□□□□ 0.06
COPS7B-221ENST00000488111 BTBD18B2RXH4 712 aa15.46■□□□□ 0.06
COPS7B-221ENST00000488111 TRIM66O15016 1216 aa15.46■□□□□ 0.06
COPS7B-221ENST00000488111 MMP1P03956 469 aa15.46■□□□□ 0.06
COPS7B-221ENST00000488111 WWC2Q6AWC2 1192 aa15.46■□□□□ 0.06
COPS7B-221ENST00000488111 TYW1BQ6NUM6 668 aa15.46■□□□□ 0.06
COPS7B-221ENST00000488111 FMR1NBQ8N0W7 255 aaPredicted RBP15.46■□□□□ 0.06
COPS7B-221ENST00000488111 OXER1Q8TDS5 423 aa15.46■□□□□ 0.06
COPS7B-221ENST00000488111 CNKSR2Q8WXI2 1034 aa15.46■□□□□ 0.06
COPS7B-221ENST00000488111 SH2D4AQ9H788 454 aa15.46■□□□□ 0.06
COPS7B-221ENST00000488111 GINM1Q9NU53 330 aa15.46■□□□□ 0.06
COPS7B-221ENST00000488111 SEC63Q9UGP8 760 aaKnown RBP15.46■□□□□ 0.06
COPS7B-221ENST00000488111 ADAMTS3O15072 1205 aa15.45■□□□□ 0.06
COPS7B-221ENST00000488111 URI1O94763 535 aaPredicted RBP15.45■□□□□ 0.06
COPS7B-221ENST00000488111 XBP1P17861 261 aa15.45■□□□□ 0.06
COPS7B-221ENST00000488111 SMARCA1P28370 1054 aa15.45■□□□□ 0.06
COPS7B-221ENST00000488111 GNL2Q13823 731 aaKnown RBP15.45■□□□□ 0.06
COPS7B-221ENST00000488111 ZNF396Q96N95 335 aaPredicted RBP15.45■□□□□ 0.06
COPS7B-221ENST00000488111 TMX1Q9H3N1 280 aa15.45■□□□□ 0.06
COPS7B-221ENST00000488111 SNCAIPQ9Y6H5 919 aa15.45■□□□□ 0.06
COPS7B-221ENST00000488111 IREB2P48200 963 aaKnown RBP15.44■□□□□ 0.06
COPS7B-221ENST00000488111 NR5A1Q13285 461 aa15.44■□□□□ 0.06
COPS7B-221ENST00000488111 DPCR1Q3MIW9 517 aa15.44■□□□□ 0.06
COPS7B-221ENST00000488111 FCHSD1Q86WN1 690 aa15.44■□□□□ 0.06
COPS7B-221ENST00000488111 DIS3L2Q8IYB7 885 aaKnown RBP15.44■□□□□ 0.06
COPS7B-221ENST00000488111 C10orf67Q8IYJ2 551 aa15.44■□□□□ 0.06
COPS7B-221ENST00000488111 ZNF280CQ8ND82 737 aa15.44■□□□□ 0.06
COPS7B-221ENST00000488111 CLMNQ96JQ2 1002 aa15.44■□□□□ 0.06
COPS7B-221ENST00000488111 SYNPO2Q9UMS6 1093 aa15.44■□□□□ 0.06
COPS7B-221ENST00000488111 NLRP5P59047 1200 aa15.44■□□□□ 0.06
COPS7B-221ENST00000488111 RSRC2Q7L4I2 434 aaKnown RBP15.44■□□□□ 0.06
COPS7B-221ENST00000488111 MRPS27Q92552 414 aaKnown RBP15.44■□□□□ 0.06
COPS7B-221ENST00000488111 ERCC4Q92889 916 aaPredicted RBP15.44■□□□□ 0.06
COPS7B-221ENST00000488111 COA7Q96BR5 231 aa15.44■□□□□ 0.06
COPS7B-221ENST00000488111 PHF20Q9BVI0 1012 aa15.44■□□□□ 0.06
COPS7B-221ENST00000488111 FUT8Q9BYC5 575 aa15.44■□□□□ 0.06
COPS7B-221ENST00000488111 KIAA1683Q9H0B3 1180 aa15.44■□□□□ 0.06
COPS7B-221ENST00000488111 ELP3Q9H9T3 547 aa15.44■□□□□ 0.06
COPS7B-221ENST00000488111 EMILIN3Q9NT22 766 aa15.44■□□□□ 0.06
COPS7B-221ENST00000488111 FBXO28Q9NVF7 368 aa15.44■□□□□ 0.06
COPS7B-221ENST00000488111 CSADQ9Y600 493 aa15.44■□□□□ 0.06
COPS7B-221ENST00000488111 ATAD5Q96QE3 1844 aa15.44■□□□□ 0.06
COPS7B-221ENST00000488111 NCAPHQ15003 741 aa15.43■□□□□ 0.06
COPS7B-221ENST00000488111 SAFBQ15424 915 aaKnown RBP eCLIP15.43■□□□□ 0.06
COPS7B-221ENST00000488111 NOL9Q5SY16 702 aaKnown RBP15.43■□□□□ 0.06
COPS7B-221ENST00000488111 AS3MTQ9HBK9 375 aa15.43■□□□□ 0.06
COPS7B-221ENST00000488111 ARFGAP3Q9NP61 516 aa15.43■□□□□ 0.06
COPS7B-221ENST00000488111 KIAA1468Q9P260 1216 aa15.43■□□□□ 0.06
COPS7B-221ENST00000488111 RRP15Q9Y3B9 282 aaKnown RBP15.43■□□□□ 0.06
COPS7B-221ENST00000488111 STXBP3O00186 592 aa15.43■□□□□ 0.06
COPS7B-221ENST00000488111 PPP1R11O60927 126 aaPredicted RBP15.43■□□□□ 0.06
COPS7B-221ENST00000488111 BACE1P56817 501 aa15.43■□□□□ 0.06
COPS7B-221ENST00000488111 SYDE2Q5VT97 1194 aa15.43■□□□□ 0.06
COPS7B-221ENST00000488111 KIFC2Q96AC6 838 aa15.43■□□□□ 0.06
COPS7B-221ENST00000488111 WDR18Q9BV38 432 aa15.43■□□□□ 0.06
COPS7B-221ENST00000488111 BARHL2Q9NY43 387 aa15.43■□□□□ 0.06
COPS7B-221ENST00000488111 ADAM21Q9UKJ8 722 aa15.43■□□□□ 0.06
COPS7B-221ENST00000488111 A0A1W2PQ27 194 aa15.42■□□□□ 0.06
COPS7B-221ENST00000488111 A0A1W2PQ64 194 aa15.42■□□□□ 0.06
COPS7B-221ENST00000488111 A0A1W2PQD8 194 aa15.42■□□□□ 0.06
COPS7B-221ENST00000488111 ACTN2P35609 894 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms