RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 ZSWIM4Q9H7M6 989 aa8.09□□□□□ -1.11
RTFDC1-209ENST00000487211 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.08□□□□□ -1.12
RTFDC1-209ENST00000487211 RNMTO43148 476 aaKnown RBP8.08□□□□□ -1.12
RTFDC1-209ENST00000487211 NME1P15531 152 aaKnown RBP8.08□□□□□ -1.12
RTFDC1-209ENST00000487211 GUCY2CP25092 1073 aa8.08□□□□□ -1.12
RTFDC1-209ENST00000487211 CASP7P55210 303 aa8.08□□□□□ -1.12
RTFDC1-209ENST00000487211 RAB33AQ14088 237 aa8.08□□□□□ -1.12
RTFDC1-209ENST00000487211 NKG7Q16617 165 aa8.08□□□□□ -1.12
RTFDC1-209ENST00000487211 C1orf141Q5JVX7 400 aa8.08□□□□□ -1.12
RTFDC1-209ENST00000487211 CDCP2Q5VXM1 449 aa8.08□□□□□ -1.12
RTFDC1-209ENST00000487211 CDPF1Q6NVV7 123 aa8.08□□□□□ -1.12
RTFDC1-209ENST00000487211 TXNRD3Q86VQ6 643 aa8.08□□□□□ -1.12
RTFDC1-209ENST00000487211 MRPL41Q8IXM3 137 aaKnown RBP8.08□□□□□ -1.12
RTFDC1-209ENST00000487211 CCDC146Q8IYE0 955 aa8.08□□□□□ -1.12
RTFDC1-209ENST00000487211 FAM46AQ96IP4 442 aaKnown RBP8.08□□□□□ -1.12
RTFDC1-209ENST00000487211 DPH2Q9BQC3 489 aaPredicted RBP8.08□□□□□ -1.12
RTFDC1-209ENST00000487211 CNNM2Q9H8M5 875 aa8.08□□□□□ -1.12
RTFDC1-209ENST00000487211 PCOLCE2Q9UKZ9 415 aa8.08□□□□□ -1.12
RTFDC1-209ENST00000487211 DAGLAQ9Y4D2 1042 aa8.08□□□□□ -1.12
RTFDC1-209ENST00000487211 WNK3Q9BYP7 1800 aa8.08□□□□□ -1.12
RTFDC1-209ENST00000487211 PITPNM2Q9BZ72 1349 aa8.07□□□□□ -1.12
RTFDC1-209ENST00000487211 A0A1W2PQH9 124 aa8.07□□□□□ -1.12
RTFDC1-209ENST00000487211 FAM86C2PA6NEL3 165 aa8.07□□□□□ -1.12
RTFDC1-209ENST00000487211 GNAT3A8MTJ3 354 aa8.07□□□□□ -1.12
RTFDC1-209ENST00000487211 ERVV-2B6SEH9 535 aa8.07□□□□□ -1.12
RTFDC1-209ENST00000487211 ZBTB7AO95365 584 aa8.07□□□□□ -1.12
RTFDC1-209ENST00000487211 HSP90AB1P08238 724 aaKnown RBP8.07□□□□□ -1.12
RTFDC1-209ENST00000487211 RAG1P15918 1043 aa8.07□□□□□ -1.12
RTFDC1-209ENST00000487211 DCTN1Q14203 1278 aa8.07□□□□□ -1.12
RTFDC1-209ENST00000487211 SLBPQ14493 270 aaKnown RBP eCLIP8.07□□□□□ -1.12
RTFDC1-209ENST00000487211 WDR43Q15061 677 aaKnown RBP eCLIP8.07□□□□□ -1.12
RTFDC1-209ENST00000487211 LARP1BQ659C4 914 aaKnown RBP8.07□□□□□ -1.12
RTFDC1-209ENST00000487211 TTC6Q86TZ1 520 aa8.07□□□□□ -1.12
RTFDC1-209ENST00000487211 PHACTR4Q8IZ21 702 aa8.07□□□□□ -1.12
RTFDC1-209ENST00000487211 C19orf47Q8N9M1 422 aaKnown RBP8.07□□□□□ -1.12
RTFDC1-209ENST00000487211 ZNF526Q8TF50 670 aaPredicted RBP8.07□□□□□ -1.12
RTFDC1-209ENST00000487211 MEGF10Q96KG7 1140 aa8.07□□□□□ -1.12
RTFDC1-209ENST00000487211 YIPF2Q9BWQ6 316 aa8.07□□□□□ -1.12
RTFDC1-209ENST00000487211 ACSS3Q9H6R3 686 aa8.07□□□□□ -1.12
RTFDC1-209ENST00000487211 ASAP1Q9ULH1 1129 aa8.07□□□□□ -1.12
RTFDC1-209ENST00000487211 CACNA1AO00555 2505 aa8.07□□□□□ -1.12
RTFDC1-209ENST00000487211 MAP3K5Q99683 1374 aa8.07□□□□□ -1.12
RTFDC1-209ENST00000487211 PLEKHG2Q9H7P9 1386 aa8.07□□□□□ -1.12
RTFDC1-209ENST00000487211 KAT6BQ8WYB5 2073 aa8.06□□□□□ -1.12
RTFDC1-209ENST00000487211 KDM6AO15550 1401 aaPredicted RBP8.06□□□□□ -1.12
RTFDC1-209ENST00000487211 RNF225M0QZC1 329 aaPredicted RBP8.06□□□□□ -1.12
RTFDC1-209ENST00000487211 BMS1Q14692 1282 aaKnown RBP8.06□□□□□ -1.12
RTFDC1-209ENST00000487211 GPR162Q16538 588 aa8.06□□□□□ -1.12
RTFDC1-209ENST00000487211 SGO2Q562F6 1265 aa8.06□□□□□ -1.12
RTFDC1-209ENST00000487211 PRAMEF13Q5VWM6 474 aa8.06□□□□□ -1.12
RTFDC1-209ENST00000487211 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.06□□□□□ -1.12
RTFDC1-209ENST00000487211 MCM10Q7L590 875 aa8.06□□□□□ -1.12
RTFDC1-209ENST00000487211 TAB3Q8N5C8 712 aaPredicted RBP8.06□□□□□ -1.12
RTFDC1-209ENST00000487211 CELF2-AS1Q8N7Q2 184 aa8.06□□□□□ -1.12
RTFDC1-209ENST00000487211 XAGE3Q8WTP9 111 aa8.06□□□□□ -1.12
RTFDC1-209ENST00000487211 FBLIM1Q8WUP2 373 aa8.06□□□□□ -1.12
RTFDC1-209ENST00000487211 UTP4Q969X6 686 aaKnown RBP8.06□□□□□ -1.12
RTFDC1-209ENST00000487211 PNNQ9H307 717 aaKnown RBP8.06□□□□□ -1.12
RTFDC1-209ENST00000487211 ST7Q9NRC1 585 aa8.06□□□□□ -1.12
RTFDC1-209ENST00000487211 ATG3Q9NT62 314 aa8.06□□□□□ -1.12
RTFDC1-209ENST00000487211 SIRPGQ9P1W8 387 aa8.06□□□□□ -1.12
RTFDC1-209ENST00000487211 TNFRSF10CO14798 259 aa8.05□□□□□ -1.12
RTFDC1-209ENST00000487211 CST3P01034 146 aaPredicted RBP8.05□□□□□ -1.12
RTFDC1-209ENST00000487211 NFICP08651 508 aa8.05□□□□□ -1.12
RTFDC1-209ENST00000487211 ACRP10323 421 aa8.05□□□□□ -1.12
RTFDC1-209ENST00000487211 BMP3P12645 472 aa8.05□□□□□ -1.12
RTFDC1-209ENST00000487211 POLR2BP30876 1174 aaKnown RBP8.05□□□□□ -1.12
RTFDC1-209ENST00000487211 TMPOP42166 694 aaKnown RBP8.05□□□□□ -1.12
RTFDC1-209ENST00000487211 SERINC3Q13530 473 aa8.05□□□□□ -1.12
RTFDC1-209ENST00000487211 NFE2L2Q16236 605 aa8.05□□□□□ -1.12
RTFDC1-209ENST00000487211 TXNRD1Q16881 649 aa8.05□□□□□ -1.12
RTFDC1-209ENST00000487211 UVSSAQ2YD98 709 aa8.05□□□□□ -1.12
RTFDC1-209ENST00000487211 INTS3Q68E01 1043 aaKnown RBP8.05□□□□□ -1.12
RTFDC1-209ENST00000487211 UNC5AQ6ZN44 842 aa8.05□□□□□ -1.12
RTFDC1-209ENST00000487211 SLFN12Q8IYM2 578 aa8.05□□□□□ -1.12
RTFDC1-209ENST00000487211 RUNDC1Q96C34 613 aa8.05□□□□□ -1.12
RTFDC1-209ENST00000487211 MYRFLQ96LU7 910 aa8.05□□□□□ -1.12
RTFDC1-209ENST00000487211 SLC9A7Q96T83 725 aa8.05□□□□□ -1.12
RTFDC1-209ENST00000487211 KIF2CQ99661 725 aa8.05□□□□□ -1.12
RTFDC1-209ENST00000487211 PIF1Q9H611 641 aa8.05□□□□□ -1.12
RTFDC1-209ENST00000487211 SLC52A2Q9HAB3 445 aa8.05□□□□□ -1.12
RTFDC1-209ENST00000487211 TMOD3Q9NYL9 352 aa8.05□□□□□ -1.12
RTFDC1-209ENST00000487211 RRP7AQ9Y3A4 280 aaKnown RBP8.05□□□□□ -1.12
RTFDC1-209ENST00000487211 SLC12A7Q9Y666 1083 aa8.05□□□□□ -1.12
RTFDC1-209ENST00000487211 PKD1L3Q7Z443 1732 aa8.05□□□□□ -1.12
RTFDC1-209ENST00000487211 SBF2Q86WG5 1849 aa8.04□□□□□ -1.12
RTFDC1-209ENST00000487211 KRBA1A5PL33 1030 aa8.04□□□□□ -1.12
RTFDC1-209ENST00000487211 K7ELQ4 463 aaPredicted RBP8.04□□□□□ -1.12
RTFDC1-209ENST00000487211 LRIG2O94898 1065 aa8.04□□□□□ -1.12
RTFDC1-209ENST00000487211 MAP4P27816 1152 aaKnown RBP8.04□□□□□ -1.12
RTFDC1-209ENST00000487211 CAP2P40123 477 aa8.04□□□□□ -1.12
RTFDC1-209ENST00000487211 RIPK4P57078 832 aa8.04□□□□□ -1.12
RTFDC1-209ENST00000487211 SLC39A6Q13433 755 aa8.04□□□□□ -1.12
RTFDC1-209ENST00000487211 ZYXQ15942 572 aaKnown RBP8.04□□□□□ -1.12
RTFDC1-209ENST00000487211 FXNQ16595 210 aa8.04□□□□□ -1.12
RTFDC1-209ENST00000487211 ARMCX6Q7L4S7 300 aa8.04□□□□□ -1.12
RTFDC1-209ENST00000487211 DZIP1LQ8IYY4 767 aaKnown RBP8.04□□□□□ -1.12
RTFDC1-209ENST00000487211 FAM9BQ8IZU0 186 aa8.04□□□□□ -1.12
RTFDC1-209ENST00000487211 ARMC10Q8N2F6 343 aa8.04□□□□□ -1.12
RTFDC1-209ENST00000487211 ABHD8Q96I13 439 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms