RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 AP3B2Q13367 1082 aa8□□□□□ -1.13
SF3A3-206ENST00000487062 STX1AQ16623 288 aa8□□□□□ -1.13
SF3A3-206ENST00000487062 LETM2Q2VYF4 491 aa8□□□□□ -1.13
SF3A3-206ENST00000487062 LHX8Q68G74 356 aa8□□□□□ -1.13
SF3A3-206ENST00000487062 DTHD1Q6ZMT9 781 aa8□□□□□ -1.13
SF3A3-206ENST00000487062 KRBA2Q6ZNG9 492 aa8□□□□□ -1.13
SF3A3-206ENST00000487062 USP50Q70EL3 339 aaPredicted RBP8□□□□□ -1.13
SF3A3-206ENST00000487062 SULF1Q8IWU6 871 aa8□□□□□ -1.13
SF3A3-206ENST00000487062 PARP9Q8IXQ6 854 aa8□□□□□ -1.13
SF3A3-206ENST00000487062 CNNM3Q8NE01 707 aa8□□□□□ -1.13
SF3A3-206ENST00000487062 CCDC102AQ96A19 550 aa8□□□□□ -1.13
SF3A3-206ENST00000487062 L3MBTL3Q96JM7 780 aaPredicted RBP8□□□□□ -1.13
SF3A3-206ENST00000487062 WRNIP1Q96S55 665 aa8□□□□□ -1.13
SF3A3-206ENST00000487062 WDR18Q9BV38 432 aa8□□□□□ -1.13
SF3A3-206ENST00000487062 CSRNP2Q9H175 543 aa8□□□□□ -1.13
SF3A3-206ENST00000487062 ANO10Q9NW15 660 aa8□□□□□ -1.13
SF3A3-206ENST00000487062 TMEM260Q9NX78 707 aa8□□□□□ -1.13
SF3A3-206ENST00000487062 USP25Q9UHP3 1055 aa8□□□□□ -1.13
SF3A3-206ENST00000487062 PNMA2Q9UL42 364 aa8□□□□□ -1.13
SF3A3-206ENST00000487062 MRPL11Q9Y3B7 192 aaKnown RBP8□□□□□ -1.13
SF3A3-206ENST00000487062 CTDP1Q9Y5B0 961 aaPredicted RBP8□□□□□ -1.13
SF3A3-206ENST00000487062 PHIPQ8WWQ0 1821 aa8□□□□□ -1.13
SF3A3-206ENST00000487062 IQCA1LA6NCM1 817 aa7.99□□□□□ -1.13
SF3A3-206ENST00000487062 A6NJR5 290 aa7.99□□□□□ -1.13
SF3A3-206ENST00000487062 C19orf81C9J6K1 198 aa7.99□□□□□ -1.13
SF3A3-206ENST00000487062 WNT7AO00755 349 aa7.99□□□□□ -1.13
SF3A3-206ENST00000487062 POLR2DO15514 142 aaKnown RBP7.99□□□□□ -1.13
SF3A3-206ENST00000487062 PPP1R12BO60237 982 aaPredicted RBP7.99□□□□□ -1.13
SF3A3-206ENST00000487062 NEMFO60524 1076 aa7.99□□□□□ -1.13
SF3A3-206ENST00000487062 OR52Z1P0C646 297 aa7.99□□□□□ -1.13
SF3A3-206ENST00000487062 GCFC2P16383 781 aaKnown RBP7.99□□□□□ -1.13
SF3A3-206ENST00000487062 NF2P35240 595 aa7.99□□□□□ -1.13
SF3A3-206ENST00000487062 UBE2SQ16763 222 aa7.99□□□□□ -1.13
SF3A3-206ENST00000487062 TMEM266Q2M3C6 531 aa7.99□□□□□ -1.13
SF3A3-206ENST00000487062 USH1GQ495M9 461 aa7.99□□□□□ -1.13
SF3A3-206ENST00000487062 KIAA1755Q5JYT7 1200 aa7.99□□□□□ -1.13
SF3A3-206ENST00000487062 SPECC1Q5M775 1068 aa7.99□□□□□ -1.13
SF3A3-206ENST00000487062 NOL9Q5SY16 702 aaKnown RBP7.99□□□□□ -1.13
SF3A3-206ENST00000487062 C4orf32Q8N8J7 132 aa7.99□□□□□ -1.13
SF3A3-206ENST00000487062 PRPF38AQ8NAV1 312 aaKnown RBP7.99□□□□□ -1.13
SF3A3-206ENST00000487062 RNF214Q8ND24 703 aa7.99□□□□□ -1.13
SF3A3-206ENST00000487062 FAM200AQ8TCP9 573 aa7.99□□□□□ -1.13
SF3A3-206ENST00000487062 KIFC2Q96AC6 838 aa7.99□□□□□ -1.13
SF3A3-206ENST00000487062 KLRG1Q96E93 195 aa7.99□□□□□ -1.13
SF3A3-206ENST00000487062 AK8Q96MA6 479 aa7.99□□□□□ -1.13
SF3A3-206ENST00000487062 NAT10Q9H0A0 1025 aaKnown RBP7.99□□□□□ -1.13
SF3A3-206ENST00000487062 RANBP17Q9H2T7 1088 aaKnown RBP7.99□□□□□ -1.13
SF3A3-206ENST00000487062 EHMT1Q9H9B1 1298 aa7.99□□□□□ -1.13
SF3A3-206ENST00000487062 KIAA1468Q9P260 1216 aa7.99□□□□□ -1.13
SF3A3-206ENST00000487062 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.99□□□□□ -1.13
SF3A3-206ENST00000487062 MRVI1Q9Y6F6 885 aa7.99□□□□□ -1.13
SF3A3-206ENST00000487062 RBBP6Q7Z6E9 1792 aaKnown RBP7.99□□□□□ -1.13
SF3A3-206ENST00000487062 ABCB11O95342 1321 aa7.99□□□□□ -1.13
SF3A3-206ENST00000487062 PARP14Q460N5 1801 aa7.99□□□□□ -1.13
SF3A3-206ENST00000487062 GLTPD2A6NH11 291 aa7.98□□□□□ -1.13
SF3A3-206ENST00000487062 SPDYE3A6NKU9 549 aa7.98□□□□□ -1.13
SF3A3-206ENST00000487062 MARCH6O60337 910 aa7.98□□□□□ -1.13
SF3A3-206ENST00000487062 PTPRAP18433 802 aa7.98□□□□□ -1.13
SF3A3-206ENST00000487062 UBA7P41226 1012 aa7.98□□□□□ -1.13
SF3A3-206ENST00000487062 IREB2P48200 963 aaKnown RBP7.98□□□□□ -1.13
SF3A3-206ENST00000487062 USP11P51784 963 aa7.98□□□□□ -1.13
SF3A3-206ENST00000487062 SNAP25P60880 206 aa7.98□□□□□ -1.13
SF3A3-206ENST00000487062 GRIN1Q05586 938 aa7.98□□□□□ -1.13
SF3A3-206ENST00000487062 SPP2Q13103 211 aa7.98□□□□□ -1.13
SF3A3-206ENST00000487062 ANO6Q4KMQ2 910 aa7.98□□□□□ -1.13
SF3A3-206ENST00000487062 PRAMEF18Q5VWM3 479 aa7.98□□□□□ -1.13
SF3A3-206ENST00000487062 PPP4R3AQ6IN85 833 aa7.98□□□□□ -1.13
SF3A3-206ENST00000487062 CCDC84Q86UT8 332 aaPredicted RBP7.98□□□□□ -1.13
SF3A3-206ENST00000487062 CEP57L1Q8IYX8 460 aa7.98□□□□□ -1.13
SF3A3-206ENST00000487062 IQUBQ8NA54 791 aa7.98□□□□□ -1.13
SF3A3-206ENST00000487062 ZNF280CQ8ND82 737 aa7.98□□□□□ -1.13
SF3A3-206ENST00000487062 SYMPKQ92797 1274 aaKnown RBP7.98□□□□□ -1.13
SF3A3-206ENST00000487062 SLF1Q9BQI6 1058 aa7.98□□□□□ -1.13
SF3A3-206ENST00000487062 ANO3Q9BYT9 981 aa7.98□□□□□ -1.13
SF3A3-206ENST00000487062 GLIS2Q9BZE0 524 aaPredicted RBP7.98□□□□□ -1.13
SF3A3-206ENST00000487062 RAB34Q9BZG1 259 aa7.98□□□□□ -1.13
SF3A3-206ENST00000487062 TANGO6Q9C0B7 1094 aa7.98□□□□□ -1.13
SF3A3-206ENST00000487062 CCDC39Q9UFE4 941 aa7.98□□□□□ -1.13
SF3A3-206ENST00000487062 SERTAD1Q9UHV2 236 aa7.98□□□□□ -1.13
SF3A3-206ENST00000487062 WDR90Q96KV7 1748 aa7.98□□□□□ -1.13
SF3A3-206ENST00000487062 OTOFQ9HC10 1997 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 USP17L15C9J2P7 530 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 USP17L13C9JLJ4 530 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 USP17L11C9JVI0 530 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 USP17L18D6R9N7 530 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 USP17L22D6RA61 530 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 USP17L17D6RBQ6 530 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 USP17L19D6RCP7 530 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 USP17L20D6RJB6 530 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 PIK3CDO00329 1044 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 MEIS2O14770 477 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 IRF6O14896 467 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 ZBED4O75132 1171 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 USP2O75604 605 aaPredicted RBP7.97□□□□□ -1.13
SF3A3-206ENST00000487062 SMC2O95347 1197 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 SLFN14P0C7P3 912 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 EPHX2P34913 555 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 ZNF165P49910 485 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 BACE1P56817 501 aa7.97□□□□□ -1.13
SF3A3-206ENST00000487062 NLRP12P59046 1061 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms