RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 FBLN5Q9UBX5 448 aa5.66□□□□□ -1.5
SNRNP27-204ENST00000487029 GGT7Q9UJ14 662 aa5.66□□□□□ -1.5
SNRNP27-204ENST00000487029 A0A1W2PQJ5 194 aa5.65□□□□□ -1.5
SNRNP27-204ENST00000487029 FAM86C2PA6NEL3 165 aa5.65□□□□□ -1.5
SNRNP27-204ENST00000487029 TNFRSF10CO14798 259 aa5.65□□□□□ -1.5
SNRNP27-204ENST00000487029 GLI4P10075 376 aa5.65□□□□□ -1.5
SNRNP27-204ENST00000487029 SARSP49591 514 aaKnown RBP5.65□□□□□ -1.5
SNRNP27-204ENST00000487029 ERMP1Q7Z2K6 904 aa5.65□□□□□ -1.5
SNRNP27-204ENST00000487029 SPRED1Q7Z699 444 aa5.65□□□□□ -1.5
SNRNP27-204ENST00000487029 C7orf61Q8IZ16 206 aa5.65□□□□□ -1.5
SNRNP27-204ENST00000487029 SMARCC2Q8TAQ2 1214 aa5.65□□□□□ -1.5
SNRNP27-204ENST00000487029 ALG3Q92685 438 aa5.65□□□□□ -1.5
SNRNP27-204ENST00000487029 SAMD11Q96NU1 681 aa5.65□□□□□ -1.5
SNRNP27-204ENST00000487029 SSBP3Q9BWW4 388 aaPredicted RBP5.65□□□□□ -1.5
SNRNP27-204ENST00000487029 SRRTQ9BXP5 876 aaKnown RBP5.65□□□□□ -1.5
SNRNP27-204ENST00000487029 CCSER2Q9H7U1 834 aa5.65□□□□□ -1.5
SNRNP27-204ENST00000487029 PRR13Q9NZ81 148 aa5.65□□□□□ -1.5
SNRNP27-204ENST00000487029 DBR1Q9UK59 544 aaKnown RBP5.65□□□□□ -1.5
SNRNP27-204ENST00000487029 C6P13671 934 aa5.64□□□□□ -1.51
SNRNP27-204ENST00000487029 EIF4A3P38919 411 aaKnown RBP5.64□□□□□ -1.51
SNRNP27-204ENST00000487029 USP48Q86UV5 1035 aa5.64□□□□□ -1.51
SNRNP27-204ENST00000487029 ZNF654Q8IZM8 581 aa5.64□□□□□ -1.51
SNRNP27-204ENST00000487029 FCRL3Q96P31 734 aaPredicted RBP5.64□□□□□ -1.51
SNRNP27-204ENST00000487029 SYT3Q9BQG1 590 aa5.64□□□□□ -1.51
SNRNP27-204ENST00000487029 UBP1Q9NZI7 540 aa5.64□□□□□ -1.51
SNRNP27-204ENST00000487029 DDX41Q9UJV9 622 aaKnown RBP5.64□□□□□ -1.51
SNRNP27-204ENST00000487029 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.64□□□□□ -1.51
SNRNP27-204ENST00000487029 SUPT16HQ9Y5B9 1047 aaKnown RBP5.64□□□□□ -1.51
SNRNP27-204ENST00000487029 PLATP00750 562 aa5.63□□□□□ -1.51
SNRNP27-204ENST00000487029 ACRP10323 421 aa5.63□□□□□ -1.51
SNRNP27-204ENST00000487029 HMGA2P52926 109 aa5.63□□□□□ -1.51
SNRNP27-204ENST00000487029 SMAD4Q13485 552 aaKnown RBP5.63□□□□□ -1.51
SNRNP27-204ENST00000487029 SEZ6Q53EL9 994 aa5.63□□□□□ -1.51
SNRNP27-204ENST00000487029 ZNF394Q53GI3 561 aa5.63□□□□□ -1.51
SNRNP27-204ENST00000487029 TDRD10Q5VZ19 366 aaKnown RBP5.63□□□□□ -1.51
SNRNP27-204ENST00000487029 ZFPM1Q8IX07 1006 aa5.63□□□□□ -1.51
SNRNP27-204ENST00000487029 TTC9BQ8N6N2 239 aa5.63□□□□□ -1.51
SNRNP27-204ENST00000487029 NLGN2Q8NFZ4 835 aa5.63□□□□□ -1.51
SNRNP27-204ENST00000487029 ADAMTS17Q8TE56 1095 aa5.63□□□□□ -1.51
SNRNP27-204ENST00000487029 ZNF296Q8WUU4 475 aaPredicted RBP5.63□□□□□ -1.51
SNRNP27-204ENST00000487029 BRF1Q92994 677 aa5.63□□□□□ -1.51
SNRNP27-204ENST00000487029 PTCHD1Q96NR3 888 aa5.63□□□□□ -1.51
SNRNP27-204ENST00000487029 NTMQ9P121 344 aa5.63□□□□□ -1.51
SNRNP27-204ENST00000487029 SUCOQ9UBS9 1254 aaKnown RBP5.63□□□□□ -1.51
SNRNP27-204ENST00000487029 ST6GALNAC2Q9UJ37 374 aa5.63□□□□□ -1.51
SNRNP27-204ENST00000487029 PPP1R11O60927 126 aaPredicted RBP5.62□□□□□ -1.51
SNRNP27-204ENST00000487029 IFNGR1P15260 489 aa5.62□□□□□ -1.51
SNRNP27-204ENST00000487029 ZNF445P59923 1031 aa5.62□□□□□ -1.51
SNRNP27-204ENST00000487029 RACK1P63244 317 aaKnown RBP5.62□□□□□ -1.51
SNRNP27-204ENST00000487029 CDSNQ15517 529 aa5.62□□□□□ -1.51
SNRNP27-204ENST00000487029 NAALADL2Q58DX5 795 aa5.62□□□□□ -1.51
SNRNP27-204ENST00000487029 DCAF15Q66K64 600 aa5.62□□□□□ -1.51
SNRNP27-204ENST00000487029 CWF19L1Q69YN2 538 aaKnown RBP5.62□□□□□ -1.51
SNRNP27-204ENST00000487029 CYP2R1Q6VVX0 501 aa5.62□□□□□ -1.51
SNRNP27-204ENST00000487029 PPFIBP1Q86W92 1011 aa5.62□□□□□ -1.51
SNRNP27-204ENST00000487029 ZBTB8AQ96BR9 441 aa5.62□□□□□ -1.51
SNRNP27-204ENST00000487029 TSPAN17Q96FV3 270 aa5.62□□□□□ -1.51
SNRNP27-204ENST00000487029 MENTQ9BUN1 341 aa5.62□□□□□ -1.51
SNRNP27-204ENST00000487029 MRIQ9BWK5 157 aa5.62□□□□□ -1.51
SNRNP27-204ENST00000487029 ADAMTS1Q9UHI8 967 aa5.62□□□□□ -1.51
SNRNP27-204ENST00000487029 PCDHGB7Q9Y5F8 929 aa5.62□□□□□ -1.51
SNRNP27-204ENST00000487029 MEIS3P2A8K0S8 358 aa5.61□□□□□ -1.51
SNRNP27-204ENST00000487029 TACR2P21452 398 aa5.61□□□□□ -1.51
SNRNP27-204ENST00000487029 CORO7P57737 925 aa5.61□□□□□ -1.51
SNRNP27-204ENST00000487029 CCDC144CPQ8IYA2 1237 aa5.61□□□□□ -1.51
SNRNP27-204ENST00000487029 REXO1Q8N1G1 1221 aaKnown RBP5.61□□□□□ -1.51
SNRNP27-204ENST00000487029 SH3RF3Q8TEJ3 882 aaPredicted RBP5.61□□□□□ -1.51
SNRNP27-204ENST00000487029 DDX11Q96FC9 970 aa5.61□□□□□ -1.51
SNRNP27-204ENST00000487029 ACBD3Q9H3P7 528 aa5.61□□□□□ -1.51
SNRNP27-204ENST00000487029 INVSQ9Y283 1065 aa5.61□□□□□ -1.51
SNRNP27-204ENST00000487029 L1CAMP32004 1257 aa5.6□□□□□ -1.51
SNRNP27-204ENST00000487029 ACVRL1P37023 503 aa5.6□□□□□ -1.51
SNRNP27-204ENST00000487029 CACNB2Q08289 660 aaPredicted RBP5.6□□□□□ -1.51
SNRNP27-204ENST00000487029 GNL2Q13823 731 aaKnown RBP5.6□□□□□ -1.51
SNRNP27-204ENST00000487029 RGL3Q3MIN7 710 aa5.6□□□□□ -1.51
SNRNP27-204ENST00000487029 AXDND1Q5T1B0 1012 aaPredicted RBP5.6□□□□□ -1.51
SNRNP27-204ENST00000487029 LIMS2Q7Z4I7 341 aa5.6□□□□□ -1.51
SNRNP27-204ENST00000487029 LINC00482Q8N8I6 264 aa5.6□□□□□ -1.51
SNRNP27-204ENST00000487029 CPA5Q8WXQ8 436 aa5.6□□□□□ -1.51
SNRNP27-204ENST00000487029 TINF2Q9BSI4 451 aa5.6□□□□□ -1.51
SNRNP27-204ENST00000487029 CAPN10Q9HC96 672 aa5.6□□□□□ -1.51
SNRNP27-204ENST00000487029 GP6Q9HCN6 339 aa5.6□□□□□ -1.51
SNRNP27-204ENST00000487029 MCM4P33991 863 aa5.59□□□□□ -1.51
SNRNP27-204ENST00000487029 CRIP3Q6Q6R5 217 aa5.59□□□□□ -1.51
SNRNP27-204ENST00000487029 SLC43A3Q8NBI5 491 aa5.59□□□□□ -1.51
SNRNP27-204ENST00000487029 DVL3Q92997 716 aaPredicted RBP5.59□□□□□ -1.51
SNRNP27-204ENST00000487029 GORASP1Q9BQQ3 440 aa5.59□□□□□ -1.51
SNRNP27-204ENST00000487029 INPP5FQ9Y2H2 1132 aa5.59□□□□□ -1.51
SNRNP27-204ENST00000487029 RWDD3Q9Y3V2 267 aa5.59□□□□□ -1.51
SNRNP27-204ENST00000487029 GDF5P43026 501 aa5.58□□□□□ -1.52
SNRNP27-204ENST00000487029 NOL9Q5SY16 702 aaKnown RBP5.58□□□□□ -1.52
SNRNP27-204ENST00000487029 TTLL7Q6ZT98 887 aa5.58□□□□□ -1.52
SNRNP27-204ENST00000487029 FIBCD1Q8N539 461 aa5.58□□□□□ -1.52
SNRNP27-204ENST00000487029 SREK1Q8WXA9 508 aaKnown RBP5.58□□□□□ -1.52
SNRNP27-204ENST00000487029 MCMBPQ9BTE3 642 aa5.58□□□□□ -1.52
SNRNP27-204ENST00000487029 SPON2Q9BUD6 331 aa5.58□□□□□ -1.52
SNRNP27-204ENST00000487029 FAM86C1Q9NVL1 165 aa5.58□□□□□ -1.52
SNRNP27-204ENST00000487029 ZNF451Q9Y4E5 1061 aa5.58□□□□□ -1.52
SNRNP27-204ENST00000487029 TBC1D8O95759 1140 aa5.57□□□□□ -1.52
SNRNP27-204ENST00000487029 TP53P04637 393 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms