RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 TRPM4Q8TD43 1214 aa13.15□□□□□ -0.3
PRKCB-207ENST00000486868 ANO3Q9BYT9 981 aa13.15□□□□□ -0.3
PRKCB-207ENST00000486868 MAN1B1Q9UKM7 699 aa13.15□□□□□ -0.3
PRKCB-207ENST00000486868 DICER1Q9UPY3 1922 aaKnown RBP13.14□□□□□ -0.31
PRKCB-207ENST00000486868 ERCC5P28715 1186 aaPredicted RBP13.14□□□□□ -0.31
PRKCB-207ENST00000486868 UBE2SQ16763 222 aa13.14□□□□□ -0.31
PRKCB-207ENST00000486868 DPCR1Q3MIW9 517 aa13.14□□□□□ -0.31
PRKCB-207ENST00000486868 Q4G0T1 1027 aa13.14□□□□□ -0.31
PRKCB-207ENST00000486868 RRAGBQ5VZM2 374 aa13.14□□□□□ -0.31
PRKCB-207ENST00000486868 SLFN12Q8IYM2 578 aa13.14□□□□□ -0.31
PRKCB-207ENST00000486868 SPICE1Q8N0Z3 855 aa13.14□□□□□ -0.31
PRKCB-207ENST00000486868 PDILTQ8N807 584 aa13.14□□□□□ -0.31
PRKCB-207ENST00000486868 ZC3H15Q8WU90 426 aaKnown RBP13.14□□□□□ -0.31
PRKCB-207ENST00000486868 KLRG1Q96E93 195 aa13.14□□□□□ -0.31
PRKCB-207ENST00000486868 L3MBTL3Q96JM7 780 aaPredicted RBP13.14□□□□□ -0.31
PRKCB-207ENST00000486868 FEZ1Q99689 392 aa13.14□□□□□ -0.31
PRKCB-207ENST00000486868 EHMT1Q9H9B1 1298 aa13.14□□□□□ -0.31
PRKCB-207ENST00000486868 RMND1Q9NWS8 449 aa13.14□□□□□ -0.31
PRKCB-207ENST00000486868 STK17AQ9UEE5 414 aa13.14□□□□□ -0.31
PRKCB-207ENST00000486868 ASTN2O75129 1339 aaPredicted RBP13.13□□□□□ -0.31
PRKCB-207ENST00000486868 SPDYE3A6NKU9 549 aa13.13□□□□□ -0.31
PRKCB-207ENST00000486868 GOLGA6L6A8MZA4 724 aa13.13□□□□□ -0.31
PRKCB-207ENST00000486868 ICAM1P05362 532 aa13.13□□□□□ -0.31
PRKCB-207ENST00000486868 STAT6P42226 847 aa13.13□□□□□ -0.31
PRKCB-207ENST00000486868 EPS15P42566 896 aa13.13□□□□□ -0.31
PRKCB-207ENST00000486868 HIRAP54198 1017 aaPredicted RBP13.13□□□□□ -0.31
PRKCB-207ENST00000486868 BACE1P56817 501 aa13.13□□□□□ -0.31
PRKCB-207ENST00000486868 ARHGAP4P98171 946 aa13.13□□□□□ -0.31
PRKCB-207ENST00000486868 KCNB1Q14721 858 aa13.13□□□□□ -0.31
PRKCB-207ENST00000486868 CABP7Q86V35 215 aa13.13□□□□□ -0.31
PRKCB-207ENST00000486868 PLA2G4DQ86XP0 818 aa13.13□□□□□ -0.31
PRKCB-207ENST00000486868 POTEDQ86YR6 584 aa13.13□□□□□ -0.31
PRKCB-207ENST00000486868 ZNF280CQ8ND82 737 aa13.13□□□□□ -0.31
PRKCB-207ENST00000486868 ENOX1Q8TC92 643 aaKnown RBP13.13□□□□□ -0.31
PRKCB-207ENST00000486868 CALML4Q96GE6 196 aa13.13□□□□□ -0.31
PRKCB-207ENST00000486868 MRFAP1L1Q96HT8 127 aa13.13□□□□□ -0.31
PRKCB-207ENST00000486868 FAM20AQ96MK3 541 aa13.13□□□□□ -0.31
PRKCB-207ENST00000486868 SLF1Q9BQI6 1058 aa13.13□□□□□ -0.31
PRKCB-207ENST00000486868 LRRC27Q9C0I9 530 aa13.13□□□□□ -0.31
PRKCB-207ENST00000486868 KCNMB3Q9NPA1 279 aa13.13□□□□□ -0.31
PRKCB-207ENST00000486868 PICK1Q9NRD5 415 aa13.13□□□□□ -0.31
PRKCB-207ENST00000486868 KBTBD4Q9NVX7 518 aa13.13□□□□□ -0.31
PRKCB-207ENST00000486868 GGA3Q9NZ52 723 aa13.13□□□□□ -0.31
PRKCB-207ENST00000486868 RNF181Q9P0P0 153 aa13.13□□□□□ -0.31
PRKCB-207ENST00000486868 DDX25Q9UHL0 483 aaKnown RBP13.13□□□□□ -0.31
PRKCB-207ENST00000486868 USP17L15C9J2P7 530 aa13.12□□□□□ -0.31
PRKCB-207ENST00000486868 USP17L13C9JLJ4 530 aa13.12□□□□□ -0.31
PRKCB-207ENST00000486868 USP17L11C9JVI0 530 aa13.12□□□□□ -0.31
PRKCB-207ENST00000486868 USP17L18D6R9N7 530 aa13.12□□□□□ -0.31
PRKCB-207ENST00000486868 USP17L22D6RA61 530 aa13.12□□□□□ -0.31
PRKCB-207ENST00000486868 USP17L17D6RBQ6 530 aa13.12□□□□□ -0.31
PRKCB-207ENST00000486868 USP17L19D6RCP7 530 aa13.12□□□□□ -0.31
PRKCB-207ENST00000486868 USP17L20D6RJB6 530 aa13.12□□□□□ -0.31
PRKCB-207ENST00000486868 GCOM1H8Y6P7 765 aaPredicted RBP13.12□□□□□ -0.31
PRKCB-207ENST00000486868 OPLAHO14841 1288 aa13.12□□□□□ -0.31
PRKCB-207ENST00000486868 TDP2O95551 362 aa13.12□□□□□ -0.31
PRKCB-207ENST00000486868 POLR2MP0CAP2 368 aa13.12□□□□□ -0.31
PRKCB-207ENST00000486868 PTPRAP18433 802 aa13.12□□□□□ -0.31
PRKCB-207ENST00000486868 AMPD3Q01432 767 aa13.12□□□□□ -0.31
PRKCB-207ENST00000486868 MYL5Q02045 173 aa13.12□□□□□ -0.31
PRKCB-207ENST00000486868 USP17L24Q0WX57 530 aa13.12□□□□□ -0.31
PRKCB-207ENST00000486868 NCAPHQ15003 741 aa13.12□□□□□ -0.31
PRKCB-207ENST00000486868 NAALADL2Q58DX5 795 aa13.12□□□□□ -0.31
PRKCB-207ENST00000486868 HYIQ5T013 277 aa13.12□□□□□ -0.31
PRKCB-207ENST00000486868 DPY19L2Q6NUT2 758 aa13.12□□□□□ -0.31
PRKCB-207ENST00000486868 CNNM4Q6P4Q7 775 aa13.12□□□□□ -0.31
PRKCB-207ENST00000486868 USP17L6PQ6QN14 398 aa13.12□□□□□ -0.31
PRKCB-207ENST00000486868 USP50Q70EL3 339 aaPredicted RBP13.12□□□□□ -0.31
PRKCB-207ENST00000486868 MCF2L2Q86YR7 1114 aa13.12□□□□□ -0.31
PRKCB-207ENST00000486868 GLIS2Q9BZE0 524 aaPredicted RBP13.12□□□□□ -0.31
PRKCB-207ENST00000486868 MYPNQ86TC9 1320 aa13.12□□□□□ -0.31
PRKCB-207ENST00000486868 FOXN1O15353 648 aa13.11□□□□□ -0.31
PRKCB-207ENST00000486868 AP5Z1O43299 807 aa13.11□□□□□ -0.31
PRKCB-207ENST00000486868 SLC37A4O43826 429 aa13.11□□□□□ -0.31
PRKCB-207ENST00000486868 PRR29P0C7W0 189 aa13.11□□□□□ -0.31
PRKCB-207ENST00000486868 INPP5BP32019 993 aa13.11□□□□□ -0.31
PRKCB-207ENST00000486868 PPP1R2P41236 205 aa13.11□□□□□ -0.31
PRKCB-207ENST00000486868 ZNF75DP51815 510 aa13.11□□□□□ -0.31
PRKCB-207ENST00000486868 OAZ1P54368 228 aa13.11□□□□□ -0.31
PRKCB-207ENST00000486868 DHX8Q14562 1220 aaKnown RBP13.11□□□□□ -0.31
PRKCB-207ENST00000486868 SH3D19Q5HYK7 790 aa13.11□□□□□ -0.31
PRKCB-207ENST00000486868 C9orf131Q5VYM1 1079 aa13.11□□□□□ -0.31
PRKCB-207ENST00000486868 LDHDQ86WU2 507 aa13.11□□□□□ -0.31
PRKCB-207ENST00000486868 AOPEPQ8N6M6 819 aa13.11□□□□□ -0.31
PRKCB-207ENST00000486868 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.11□□□□□ -0.31
PRKCB-207ENST00000486868 RBM46Q8TBY0 533 aaKnown RBP13.11□□□□□ -0.31
PRKCB-207ENST00000486868 HAS1Q92839 578 aa13.11□□□□□ -0.31
PRKCB-207ENST00000486868 ERCC4Q92889 916 aaPredicted RBP13.11□□□□□ -0.31
PRKCB-207ENST00000486868 KIFC2Q96AC6 838 aa13.11□□□□□ -0.31
PRKCB-207ENST00000486868 WRNIP1Q96S55 665 aa13.11□□□□□ -0.31
PRKCB-207ENST00000486868 SLC38A10Q9HBR0 1119 aa13.11□□□□□ -0.31
PRKCB-207ENST00000486868 EMILIN3Q9NT22 766 aa13.11□□□□□ -0.31
PRKCB-207ENST00000486868 LRWD1Q9UFC0 647 aa13.11□□□□□ -0.31
PRKCB-207ENST00000486868 PPP1R9AQ9ULJ8 1098 aa13.11□□□□□ -0.31
PRKCB-207ENST00000486868 BIN1O00499 593 aa13.1□□□□□ -0.31
PRKCB-207ENST00000486868 DDNO94850 711 aaPredicted RBP13.1□□□□□ -0.31
PRKCB-207ENST00000486868 YBX3P16989 372 aaKnown RBP eCLIP13.1□□□□□ -0.312e-9■■■□□ 15.6
PRKCB-207ENST00000486868 BMP6P22004 513 aa13.1□□□□□ -0.31
PRKCB-207ENST00000486868 TECP42680 631 aa13.1□□□□□ -0.31
PRKCB-207ENST00000486868 TXKP42681 527 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms