RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 KCNJ4P48050 445 aa8.45□□□□□ -1.06
SMC4-217ENST00000485867 FCGRTP55899 365 aa8.45□□□□□ -1.06
SMC4-217ENST00000485867 ARTNQ5T4W7 220 aa8.45□□□□□ -1.06
SMC4-217ENST00000485867 FAM109BQ6ICB4 259 aaPredicted RBP8.45□□□□□ -1.06
SMC4-217ENST00000485867 NECAB2Q7Z6G3 386 aa8.45□□□□□ -1.06
SMC4-217ENST00000485867 ANKRD23Q86SG2 305 aa8.45□□□□□ -1.06
SMC4-217ENST00000485867 WRNIP1Q96S55 665 aa8.45□□□□□ -1.06
SMC4-217ENST00000485867 MKNK1Q9BUB5 465 aa8.45□□□□□ -1.06
SMC4-217ENST00000485867 METTL22Q9BUU2 404 aaPredicted RBP8.45□□□□□ -1.06
SMC4-217ENST00000485867 JAG2Q9Y219 1238 aa8.45□□□□□ -1.06
SMC4-217ENST00000485867 FAM205AQ6ZU69 1335 aa8.45□□□□□ -1.06
SMC4-217ENST00000485867 AK9Q5TCS8 1911 aa8.44□□□□□ -1.06
SMC4-217ENST00000485867 TCP10L2B9ZVM9 353 aa8.44□□□□□ -1.06
SMC4-217ENST00000485867 SNAP23O00161 211 aa8.44□□□□□ -1.06
SMC4-217ENST00000485867 PDHXO00330 501 aa8.44□□□□□ -1.06
SMC4-217ENST00000485867 GHRHP01286 108 aa8.44□□□□□ -1.06
SMC4-217ENST00000485867 CHRNDQ07001 517 aa8.44□□□□□ -1.06
SMC4-217ENST00000485867 DUSP27Q5VZP5 1158 aa8.44□□□□□ -1.06
SMC4-217ENST00000485867 C15orf52Q6ZUT6 534 aaKnown RBP8.44□□□□□ -1.06
SMC4-217ENST00000485867 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.44□□□□□ -1.06
SMC4-217ENST00000485867 CLP1Q92989 425 aaKnown RBP8.44□□□□□ -1.06
SMC4-217ENST00000485867 ZKSCAN4Q969J2 545 aaPredicted RBP8.44□□□□□ -1.06
SMC4-217ENST00000485867 MEGF10Q96KG7 1140 aa8.44□□□□□ -1.06
SMC4-217ENST00000485867 KRTAP4-8Q9BYQ9 185 aa8.44□□□□□ -1.06
SMC4-217ENST00000485867 LAS1LQ9Y4W2 734 aaKnown RBP8.44□□□□□ -1.06
SMC4-217ENST00000485867 IGKV5-2P06315 115 aa8.43□□□□□ -1.06
SMC4-217ENST00000485867 TNNI2P48788 182 aa8.43□□□□□ -1.06
SMC4-217ENST00000485867 FLT3LGP49771 235 aa8.43□□□□□ -1.06
SMC4-217ENST00000485867 MOGSQ13724 837 aa8.43□□□□□ -1.06
SMC4-217ENST00000485867 NAA30Q147X3 362 aaPredicted RBP8.43□□□□□ -1.06
SMC4-217ENST00000485867 GDF6Q6KF10 455 aaPredicted RBP8.43□□□□□ -1.06
SMC4-217ENST00000485867 ZNF804AQ7Z570 1209 aa8.43□□□□□ -1.06
SMC4-217ENST00000485867 DZIP1LQ8IYY4 767 aaKnown RBP8.43□□□□□ -1.06
SMC4-217ENST00000485867 IL22RA1Q8N6P7 574 aa8.43□□□□□ -1.06
SMC4-217ENST00000485867 OR13H1Q8NG92 308 aa8.43□□□□□ -1.06
SMC4-217ENST00000485867 PIK3R5Q8WYR1 880 aa8.43□□□□□ -1.06
SMC4-217ENST00000485867 MPHOSPH8Q99549 860 aa8.43□□□□□ -1.06
SMC4-217ENST00000485867 RAPGEFL1Q9UHV5 662 aa8.43□□□□□ -1.06
SMC4-217ENST00000485867 SERPINA10Q9UK55 444 aa8.43□□□□□ -1.06
SMC4-217ENST00000485867 MUC3AQ02505 3323 aa8.43□□□□□ -1.06
SMC4-217ENST00000485867 ZAP70P43403 619 aa8.42□□□□□ -1.06
SMC4-217ENST00000485867 PPATQ06203 517 aa8.42□□□□□ -1.06
SMC4-217ENST00000485867 MAFAQ8NHW3 353 aaPredicted RBP8.42□□□□□ -1.06
SMC4-217ENST00000485867 FAM161BQ96MY7 647 aa8.42□□□□□ -1.06
SMC4-217ENST00000485867 PARK7Q99497 189 aaKnown RBP8.42□□□□□ -1.06
SMC4-217ENST00000485867 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.42□□□□□ -1.06
SMC4-217ENST00000485867 RBSNQ9H1K0 784 aa8.42□□□□□ -1.06
SMC4-217ENST00000485867 SRA1Q9HD15 236 aaKnown RBP8.42□□□□□ -1.06
SMC4-217ENST00000485867 ZFP64Q9NPA5 681 aa8.42□□□□□ -1.06
SMC4-217ENST00000485867 FAM13BQ9NYF5 915 aa8.42□□□□□ -1.06
SMC4-217ENST00000485867 TTF2Q9UNY4 1162 aaKnown RBP8.42□□□□□ -1.06
SMC4-217ENST00000485867 TRIM33Q9UPN9 1127 aa8.42□□□□□ -1.06
SMC4-217ENST00000485867 LAMA2P24043 3122 aaKnown RBP8.41□□□□□ -1.06
SMC4-217ENST00000485867 MAST2Q6P0Q8 1798 aa8.41□□□□□ -1.06
SMC4-217ENST00000485867 RPAP1Q9BWH6 1393 aaPredicted RBP8.41□□□□□ -1.06
SMC4-217ENST00000485867 TAF5LO75529 589 aa8.41□□□□□ -1.06
SMC4-217ENST00000485867 CYP2C8P10632 490 aa8.41□□□□□ -1.06
SMC4-217ENST00000485867 PLA2G5P39877 138 aa8.41□□□□□ -1.06
SMC4-217ENST00000485867 CRKP46108 304 aa8.41□□□□□ -1.06
SMC4-217ENST00000485867 SETDB1Q15047 1291 aa8.41□□□□□ -1.06
SMC4-217ENST00000485867 MFSD14BQ5SR56 506 aa8.41□□□□□ -1.06
SMC4-217ENST00000485867 UBE3BQ7Z3V4 1068 aa8.41□□□□□ -1.06
SMC4-217ENST00000485867 PCGF6Q9BYE7 350 aa8.41□□□□□ -1.06
SMC4-217ENST00000485867 MAP3K2Q9Y2U5 619 aa8.41□□□□□ -1.06
SMC4-217ENST00000485867 PLXNB2O15031 1838 aa8.4□□□□□ -1.06
SMC4-217ENST00000485867 LTBP2Q14767 1821 aa8.4□□□□□ -1.06
SMC4-217ENST00000485867 FRMPD3Q5JV73 1810 aa8.4□□□□□ -1.06
SMC4-217ENST00000485867 PHIPQ8WWQ0 1821 aa8.4□□□□□ -1.06
SMC4-217ENST00000485867 PFASO15067 1338 aa8.4□□□□□ -1.06
SMC4-217ENST00000485867 MYO9BQ13459 2157 aa8.4□□□□□ -1.06
SMC4-217ENST00000485867 TNPO2O14787 897 aaKnown RBP8.4□□□□□ -1.06
SMC4-217ENST00000485867 ZBTB39O15060 712 aa8.4□□□□□ -1.06
SMC4-217ENST00000485867 DDX58O95786 925 aaKnown RBP8.4□□□□□ -1.06
SMC4-217ENST00000485867 CACNB3P54284 484 aa8.4□□□□□ -1.06
SMC4-217ENST00000485867 DCAF15Q66K64 600 aa8.4□□□□□ -1.06
SMC4-217ENST00000485867 MAP4K3Q8IVH8 894 aa8.4□□□□□ -1.06
SMC4-217ENST00000485867 TMEM130Q8N3G9 435 aa8.4□□□□□ -1.06
SMC4-217ENST00000485867 PBXIP1Q96AQ6 731 aa8.4□□□□□ -1.06
SMC4-217ENST00000485867 PLA2G12BQ9BX93 195 aa8.4□□□□□ -1.06
SMC4-217ENST00000485867 MRPL18Q9H0U6 180 aaKnown RBP8.4□□□□□ -1.06
SMC4-217ENST00000485867 C11orf49Q9H6J7 331 aa8.4□□□□□ -1.06
SMC4-217ENST00000485867 AKTIPQ9H8T0 292 aa8.4□□□□□ -1.06
SMC4-217ENST00000485867 STIM2Q9P246 746 aa8.4□□□□□ -1.06
SMC4-217ENST00000485867 CDH23Q9H251 3354 aa8.4□□□□□ -1.07
SMC4-217ENST00000485867 DOCK2Q92608 1830 aa8.39□□□□□ -1.07
SMC4-217ENST00000485867 CSF1RP07333 972 aa8.39□□□□□ -1.07
SMC4-217ENST00000485867 LRP8Q14114 963 aa8.39□□□□□ -1.07
SMC4-217ENST00000485867 CWF19L2Q2TBE0 894 aaKnown RBP8.39□□□□□ -1.07
SMC4-217ENST00000485867 FAM83AQ86UY5 434 aa8.39□□□□□ -1.07
SMC4-217ENST00000485867 CACTIN-AS1Q8N1I8 211 aa8.39□□□□□ -1.07
SMC4-217ENST00000485867 GPR152Q8TDT2 470 aa8.39□□□□□ -1.07
SMC4-217ENST00000485867 HOOK2Q96ED9 719 aa8.39□□□□□ -1.07
SMC4-217ENST00000485867 CDX2Q99626 313 aaPredicted RBP8.39□□□□□ -1.07
SMC4-217ENST00000485867 ZNF341Q9BYN7 854 aa8.39□□□□□ -1.07
SMC4-217ENST00000485867 PIEZO1Q92508 2521 aa8.38□□□□□ -1.07
SMC4-217ENST00000485867 F8W735 103 aaPredicted RBP8.38□□□□□ -1.07
SMC4-217ENST00000485867 ALX3O95076 343 aa8.38□□□□□ -1.07
SMC4-217ENST00000485867 CASP7P55210 303 aa8.38□□□□□ -1.07
SMC4-217ENST00000485867 TRIM26Q12899 539 aaPredicted RBP8.38□□□□□ -1.07
SMC4-217ENST00000485867 NOL9Q5SY16 702 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms