RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 CALML3P27482 149 aa22.62■■□□□ 1.21
COL27A1-205ENST00000485397 GRIN2CQ14957 1233 aa22.62■■□□□ 1.21
COL27A1-205ENST00000485397 RASIP1Q5U651 963 aa22.62■■□□□ 1.21
COL27A1-205ENST00000485397 ZKSCAN3Q9BRR0 538 aa22.62■■□□□ 1.21
COL27A1-205ENST00000485397 TRPV6Q9H1D0 765 aa22.62■■□□□ 1.21
COL27A1-205ENST00000485397 NEDD4P46934 1319 aa22.61■■□□□ 1.21
COL27A1-205ENST00000485397 SNHG28P0DPA3 235 aa22.61■■□□□ 1.21
COL27A1-205ENST00000485397 PCP11498 1178 aaKnown RBP22.61■■□□□ 1.21
COL27A1-205ENST00000485397 DUSP28Q4G0W2 176 aa22.61■■□□□ 1.21
COL27A1-205ENST00000485397 CHD1LQ86WJ1 897 aa22.61■■□□□ 1.21
COL27A1-205ENST00000485397 TIFAQ96CG3 184 aa22.61■■□□□ 1.21
COL27A1-205ENST00000485397 YTHDC1Q96MU7 727 aaKnown RBP22.61■■□□□ 1.21
COL27A1-205ENST00000485397 WDR11Q9BZH6 1224 aa22.61■■□□□ 1.21
COL27A1-205ENST00000485397 HIPK3Q9H422 1215 aa22.61■■□□□ 1.21
COL27A1-205ENST00000485397 B4GALT4O60513 344 aa22.6■■□□□ 1.21
COL27A1-205ENST00000485397 GOLGA8HP0CJ92 632 aa22.6■■□□□ 1.21
COL27A1-205ENST00000485397 PBX2P40425 430 aa22.6■■□□□ 1.21
COL27A1-205ENST00000485397 MFAP1P55081 439 aaKnown RBP22.6■■□□□ 1.21
COL27A1-205ENST00000485397 AAMPQ13685 434 aa22.6■■□□□ 1.21
COL27A1-205ENST00000485397 PSRC1Q6PGN9 363 aaPredicted RBP22.6■■□□□ 1.21
COL27A1-205ENST00000485397 RNF207Q6ZRF8 634 aa22.6■■□□□ 1.21
COL27A1-205ENST00000485397 ESR2Q92731 530 aa22.6■■□□□ 1.21
COL27A1-205ENST00000485397 CPVLQ9H3G5 476 aa22.6■■□□□ 1.21
COL27A1-205ENST00000485397 RNF41Q9H4P4 317 aaPredicted RBP22.6■■□□□ 1.21
COL27A1-205ENST00000485397 IL23AQ9NPF7 189 aa22.6■■□□□ 1.21
COL27A1-205ENST00000485397 CUL9Q8IWT3 2517 aa22.59■■□□□ 1.21
COL27A1-205ENST00000485397 ZNF213O14771 459 aa22.59■■□□□ 1.21
COL27A1-205ENST00000485397 CCL23P55773 120 aa22.59■■□□□ 1.21
COL27A1-205ENST00000485397 RPS6P62753 249 aaKnown RBP22.59■■□□□ 1.21
COL27A1-205ENST00000485397 CWC27Q6UX04 472 aaKnown RBP22.59■■□□□ 1.21
COL27A1-205ENST00000485397 PBX4Q9BYU1 374 aa22.59■■□□□ 1.21
COL27A1-205ENST00000485397 UBA5Q9GZZ9 404 aa22.59■■□□□ 1.21
COL27A1-205ENST00000485397 OSBPL3Q9H4L5 887 aa22.59■■□□□ 1.21
COL27A1-205ENST00000485397 ZNF576Q9H609 170 aa22.59■■□□□ 1.21
COL27A1-205ENST00000485397 A0A0C4DFX4 3053 aa22.59■■□□□ 1.21
COL27A1-205ENST00000485397 WDR19Q8NEZ3 1342 aa22.58■■□□□ 1.21
COL27A1-205ENST00000485397 LOC102724159A0A0B4J2E5 919 aa22.58■■□□□ 1.21
COL27A1-205ENST00000485397 RBM47A0AV96 593 aaKnown RBP22.58■■□□□ 1.21
COL27A1-205ENST00000485397 NUCB1Q02818 461 aa22.58■■□□□ 1.21
COL27A1-205ENST00000485397 PWP2Q15269 919 aaKnown RBP22.58■■□□□ 1.21
COL27A1-205ENST00000485397 NOC4LQ9BVI4 516 aaKnown RBP22.58■■□□□ 1.21
COL27A1-205ENST00000485397 CXXC1Q9P0U4 656 aaPredicted RBP22.58■■□□□ 1.21
COL27A1-205ENST00000485397 PNMA2Q9UL42 364 aa22.58■■□□□ 1.21
COL27A1-205ENST00000485397 MYL3P08590 195 aa22.57■■□□□ 1.2
COL27A1-205ENST00000485397 DGKHQ86XP1 1220 aa22.57■■□□□ 1.2
COL27A1-205ENST00000485397 OR6J1Q8NGC5 347 aa22.57■■□□□ 1.2
COL27A1-205ENST00000485397 EXOC6Q8TAG9 804 aa22.57■■□□□ 1.2
COL27A1-205ENST00000485397 HERVK_113Q902F9 699 aa22.57■■□□□ 1.2
COL27A1-205ENST00000485397 SEZ6LQ9BYH1 1024 aa22.57■■□□□ 1.2
COL27A1-205ENST00000485397 KDM4AO75164 1064 aa22.56■■□□□ 1.2
COL27A1-205ENST00000485397 FGBP02675 491 aa22.56■■□□□ 1.2
COL27A1-205ENST00000485397 PDE4DQ08499 809 aa22.56■■□□□ 1.2
COL27A1-205ENST00000485397 USH1GQ495M9 461 aa22.56■■□□□ 1.2
COL27A1-205ENST00000485397 GPATCH4Q5T3I0 446 aaKnown RBP22.56■■□□□ 1.2
COL27A1-205ENST00000485397 WNT8AQ9H1J5 351 aa22.56■■□□□ 1.2
COL27A1-205ENST00000485397 ALDH8A1Q9H2A2 487 aaPredicted RBP22.56■■□□□ 1.2
COL27A1-205ENST00000485397 DIAPH3Q9NSV4 1193 aa22.56■■□□□ 1.2
COL27A1-205ENST00000485397 POLR3EQ9NVU0 708 aa22.56■■□□□ 1.2
COL27A1-205ENST00000485397 EDNRBP24530 442 aa22.55■■□□□ 1.2
COL27A1-205ENST00000485397 PURAQ00577 322 aaKnown RBP22.55■■□□□ 1.2
COL27A1-205ENST00000485397 OTOP2Q7RTS6 562 aa22.55■■□□□ 1.2
COL27A1-205ENST00000485397 COPS5Q92905 334 aa22.55■■□□□ 1.2
COL27A1-205ENST00000485397 TRMT13Q9NUP7 481 aaKnown RBP22.55■■□□□ 1.2
COL27A1-205ENST00000485397 B4E1Z4 1266 aa22.54■■□□□ 1.2
COL27A1-205ENST00000485397 CPT1AP50416 773 aa22.54■■□□□ 1.2
COL27A1-205ENST00000485397 IQCA1Q86XH1 822 aa22.54■■□□□ 1.2
COL27A1-205ENST00000485397 PNMA1Q8ND90 353 aa22.54■■□□□ 1.2
COL27A1-205ENST00000485397 DNERQ8NFT8 737 aa22.54■■□□□ 1.2
COL27A1-205ENST00000485397 PPP1R13LQ8WUF5 828 aa22.54■■□□□ 1.2
COL27A1-205ENST00000485397 TBC1D5Q92609 795 aa22.54■■□□□ 1.2
COL27A1-205ENST00000485397 SCLYQ96I15 445 aa22.54■■□□□ 1.2
COL27A1-205ENST00000485397 CYP2C9P11712 490 aa22.53■■□□□ 1.2
COL27A1-205ENST00000485397 PPP2R5BQ15173 497 aa22.53■■□□□ 1.2
COL27A1-205ENST00000485397 CDC37Q16543 378 aaPredicted RBP22.53■■□□□ 1.2
COL27A1-205ENST00000485397 USP38Q8NB14 1042 aa22.53■■□□□ 1.2
COL27A1-205ENST00000485397 ANKS1AQ92625 1134 aa22.53■■□□□ 1.2
COL27A1-205ENST00000485397 VWCEQ96DN2 955 aa22.53■■□□□ 1.2
COL27A1-205ENST00000485397 ZSCAN10Q96SZ4 725 aaPredicted RBP22.53■■□□□ 1.2
COL27A1-205ENST00000485397 MPHOSPH6Q99547 160 aaKnown RBP22.53■■□□□ 1.2
COL27A1-205ENST00000485397 MTG1Q9BT17 334 aaPredicted RBP22.53■■□□□ 1.2
COL27A1-205ENST00000485397 KAT14Q9H8E8 782 aa22.53■■□□□ 1.2
COL27A1-205ENST00000485397 CDH23Q9H251 3354 aa22.53■■□□□ 1.2
COL27A1-205ENST00000485397 UNC80Q8N2C7 3258 aa22.52■■□□□ 1.2
COL27A1-205ENST00000485397 NKRFO15226 690 aaKnown RBP eCLIP22.52■■□□□ 1.2
COL27A1-205ENST00000485397 CCDC178Q5BJE1 867 aa22.52■■□□□ 1.2
COL27A1-205ENST00000485397 RGS22Q8NE09 1264 aa22.52■■□□□ 1.2
COL27A1-205ENST00000485397 SCFD2Q8WU76 684 aa22.52■■□□□ 1.2
COL27A1-205ENST00000485397 DSCC1Q9BVC3 393 aa22.52■■□□□ 1.2
COL27A1-205ENST00000485397 MTIF3Q9H2K0 278 aaKnown RBP22.52■■□□□ 1.2
COL27A1-205ENST00000485397 GPHNQ9NQX3 736 aaPredicted RBP22.52■■□□□ 1.2
COL27A1-205ENST00000485397 ZSWIM5Q9P217 1185 aa22.52■■□□□ 1.2
COL27A1-205ENST00000485397 TNKSO95271 1327 aa22.52■■□□□ 1.2
COL27A1-205ENST00000485397 HIP1O00291 1037 aa22.51■■□□□ 1.19
COL27A1-205ENST00000485397 ARIH2O95376 493 aa22.51■■□□□ 1.19
COL27A1-205ENST00000485397 TXNP10599 105 aaKnown RBP22.51■■□□□ 1.19
COL27A1-205ENST00000485397 NBPF20Q3BBV1 942 aa22.51■■□□□ 1.19
COL27A1-205ENST00000485397 ADGRF4Q8IZF3 695 aa22.51■■□□□ 1.19
COL27A1-205ENST00000485397 ENAHQ8N8S7 591 aaPredicted RBP22.51■■□□□ 1.19
COL27A1-205ENST00000485397 NKX2-4Q9H2Z4 354 aa22.51■■□□□ 1.19
COL27A1-205ENST00000485397 PRDM12Q9H4Q4 367 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms