RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 LCE4AQ5TA78 99 aa9.84□□□□□ -0.83
UBR3-210ENST00000484596 JMJD8Q96S16 334 aa9.84□□□□□ -0.83
UBR3-210ENST00000484596 IRF2BPLQ9H1B7 796 aa9.84□□□□□ -0.83
UBR3-210ENST00000484596 ACSL6Q9UKU0 697 aa9.84□□□□□ -0.83
UBR3-210ENST00000484596 VIPR1P32241 457 aa9.83□□□□□ -0.84
UBR3-210ENST00000484596 YBX1P67809 324 aaKnown RBP9.83□□□□□ -0.84
UBR3-210ENST00000484596 CYP4F8P98187 520 aa9.83□□□□□ -0.84
UBR3-210ENST00000484596 SSRP1Q08945 709 aaKnown RBP9.83□□□□□ -0.84
UBR3-210ENST00000484596 GRB10Q13322 594 aa9.83□□□□□ -0.84
UBR3-210ENST00000484596 NAT16Q8N8M0 369 aa9.83□□□□□ -0.84
UBR3-210ENST00000484596 NUP43Q8NFH3 380 aa9.83□□□□□ -0.84
UBR3-210ENST00000484596 NOL6Q9H6R4 1146 aaKnown RBP9.83□□□□□ -0.84
UBR3-210ENST00000484596 IMPACTQ9P2X3 320 aa9.83□□□□□ -0.84
UBR3-210ENST00000484596 MBD1Q9UIS9 605 aaPredicted RBP9.83□□□□□ -0.84
UBR3-210ENST00000484596 TMA7Q9Y2S6 64 aaKnown RBP9.83□□□□□ -0.84
UBR3-210ENST00000484596 ARL4AP40617 200 aa9.82□□□□□ -0.84
UBR3-210ENST00000484596 NOP2P46087 812 aaKnown RBP9.82□□□□□ -0.84
UBR3-210ENST00000484596 POU4F1Q01851 419 aa9.82□□□□□ -0.84
UBR3-210ENST00000484596 LAPTM5Q13571 262 aa9.82□□□□□ -0.84
UBR3-210ENST00000484596 LONRF2Q1L5Z9 754 aa9.82□□□□□ -0.84
UBR3-210ENST00000484596 ZNF513Q8N8E2 541 aaPredicted RBP9.82□□□□□ -0.84
UBR3-210ENST00000484596 ADCY4Q8NFM4 1077 aa9.82□□□□□ -0.84
UBR3-210ENST00000484596 FCRL3Q96P31 734 aaPredicted RBP9.82□□□□□ -0.84
UBR3-210ENST00000484596 SPATA9Q9BWV2 254 aa9.82□□□□□ -0.84
UBR3-210ENST00000484596 SIRT5Q9NXA8 310 aa9.82□□□□□ -0.84
UBR3-210ENST00000484596 APEX2Q9UBZ4 518 aa9.82□□□□□ -0.84
UBR3-210ENST00000484596 CGGBP1Q9UFW8 167 aaPredicted RBP9.82□□□□□ -0.84
UBR3-210ENST00000484596 CNOT6Q9ULM6 557 aaKnown RBP9.82□□□□□ -0.84
UBR3-210ENST00000484596 EMC9Q9Y3B6 208 aa9.82□□□□□ -0.84
UBR3-210ENST00000484596 KDM2BQ8NHM5 1336 aa9.82□□□□□ -0.84
UBR3-210ENST00000484596 TLDC2A0PJX2 215 aa9.81□□□□□ -0.84
UBR3-210ENST00000484596 MPOP05164 745 aa9.81□□□□□ -0.84
UBR3-210ENST00000484596 HSP90AA2PQ14568 343 aaPredicted RBP9.81□□□□□ -0.84
UBR3-210ENST00000484596 ZC3H12BQ5HYM0 836 aaKnown RBP9.81□□□□□ -0.84
UBR3-210ENST00000484596 HLA-DQA1Q5Y7H0 255 aa9.81□□□□□ -0.84
UBR3-210ENST00000484596 SPATC1Q76KD6 591 aa9.81□□□□□ -0.84
UBR3-210ENST00000484596 KLHL14Q9P2G3 628 aa9.81□□□□□ -0.84
UBR3-210ENST00000484596 FGF10O15520 208 aaPredicted RBP9.8□□□□□ -0.84
UBR3-210ENST00000484596 ITGAVP06756 1048 aa9.8□□□□□ -0.84
UBR3-210ENST00000484596 PPP2R5DQ14738 602 aa9.8□□□□□ -0.84
UBR3-210ENST00000484596 TRIM59Q8IWR1 403 aa9.8□□□□□ -0.84
UBR3-210ENST00000484596 THAP3Q8WTV1 239 aaPredicted RBP9.8□□□□□ -0.84
UBR3-210ENST00000484596 ZDHHC15Q96MV8 337 aa9.8□□□□□ -0.84
UBR3-210ENST00000484596 CNTD2Q9H8S5 307 aa9.8□□□□□ -0.84
UBR3-210ENST00000484596 PFDN2Q9UHV9 154 aa9.8□□□□□ -0.84
UBR3-210ENST00000484596 A0A1W2PQU0 124 aa9.79□□□□□ -0.84
UBR3-210ENST00000484596 ABLIM1O14639 778 aa9.79□□□□□ -0.84
UBR3-210ENST00000484596 CD3EP07766 207 aa9.79□□□□□ -0.84
UBR3-210ENST00000484596 IFNGR1P15260 489 aa9.79□□□□□ -0.84
UBR3-210ENST00000484596 EPHB3P54753 998 aa9.79□□□□□ -0.84
UBR3-210ENST00000484596 SSPNQ14714 243 aa9.79□□□□□ -0.84
UBR3-210ENST00000484596 GIMAP6Q6P9H5 292 aa9.79□□□□□ -0.84
UBR3-210ENST00000484596 ZNF227Q86WZ6 799 aa9.79□□□□□ -0.84
UBR3-210ENST00000484596 MRGPRX3Q96LB0 322 aa9.79□□□□□ -0.84
UBR3-210ENST00000484596 TNFRSF12AQ9NP84 129 aa9.79□□□□□ -0.84
UBR3-210ENST00000484596 KCTD3Q9Y597 815 aa9.79□□□□□ -0.84
UBR3-210ENST00000484596 MSL3P1P0C860 447 aa9.78□□□□□ -0.84
UBR3-210ENST00000484596 AMPD2Q01433 879 aa9.78□□□□□ -0.84
UBR3-210ENST00000484596 MVKQ03426 396 aa9.78□□□□□ -0.84
UBR3-210ENST00000484596 RAB3GAP1Q15042 981 aa9.78□□□□□ -0.84
UBR3-210ENST00000484596 JAMLQ86YT9 394 aa9.78□□□□□ -0.84
UBR3-210ENST00000484596 JMYQ8N9B5 988 aa9.78□□□□□ -0.84
UBR3-210ENST00000484596 CCDC140Q96MF4 163 aa9.78□□□□□ -0.84
UBR3-210ENST00000484596 NUDT19A8MXV4 375 aa9.77□□□□□ -0.85
UBR3-210ENST00000484596 KCNH1O95259 989 aa9.77□□□□□ -0.85
UBR3-210ENST00000484596 PPP2R2AP63151 447 aa9.77□□□□□ -0.85
UBR3-210ENST00000484596 ZNF385BQ569K4 471 aa9.77□□□□□ -0.85
UBR3-210ENST00000484596 C2orf27AQ580R0 203 aa9.77□□□□□ -0.85
UBR3-210ENST00000484596 OLFML2BQ68BL8 750 aa9.77□□□□□ -0.85
UBR3-210ENST00000484596 CYP2R1Q6VVX0 501 aa9.77□□□□□ -0.85
UBR3-210ENST00000484596 LILRB2Q8N423 598 aa9.77□□□□□ -0.85
UBR3-210ENST00000484596 ZBTB38Q8NAP3 1195 aaPredicted RBP9.77□□□□□ -0.85
UBR3-210ENST00000484596 PTCHD1Q96NR3 888 aa9.77□□□□□ -0.85
UBR3-210ENST00000484596 AARSD1Q9BTE6 412 aaKnown RBP9.77□□□□□ -0.85
UBR3-210ENST00000484596 A0A1W2PQ27 194 aa9.76□□□□□ -0.85
UBR3-210ENST00000484596 A0A1W2PQ64 194 aa9.76□□□□□ -0.85
UBR3-210ENST00000484596 A0A1W2PQC6 194 aa9.76□□□□□ -0.85
UBR3-210ENST00000484596 A0A1W2PQD8 194 aa9.76□□□□□ -0.85
UBR3-210ENST00000484596 N4BP3O15049 544 aa9.76□□□□□ -0.85
UBR3-210ENST00000484596 DIAPH1O60610 1272 aaKnown RBP9.76□□□□□ -0.85
UBR3-210ENST00000484596 CDR1P51861 262 aa9.76□□□□□ -0.85
UBR3-210ENST00000484596 TMC6Q7Z403 805 aa9.76□□□□□ -0.85
UBR3-210ENST00000484596 PANK1Q8TE04 598 aa9.76□□□□□ -0.85
UBR3-210ENST00000484596 SH3TC2Q8TF17 1288 aa9.76□□□□□ -0.85
UBR3-210ENST00000484596 SIGLEC10Q96LC7 697 aa9.76□□□□□ -0.85
UBR3-210ENST00000484596 IPO9Q96P70 1041 aaKnown RBP9.76□□□□□ -0.85
UBR3-210ENST00000484596 TBX22Q9Y458 520 aa9.76□□□□□ -0.85
UBR3-210ENST00000484596 IRAK3Q9Y616 596 aa9.76□□□□□ -0.85
UBR3-210ENST00000484596 TRAV20A0A0B4J274 112 aa9.75□□□□□ -0.85
UBR3-210ENST00000484596 CCDC163A0A0D9SF12 145 aa9.75□□□□□ -0.85
UBR3-210ENST00000484596 HOXC12P31275 282 aa9.75□□□□□ -0.85
UBR3-210ENST00000484596 CBX2Q14781 532 aaPredicted RBP9.75□□□□□ -0.85
UBR3-210ENST00000484596 RPTNQ6XPR3 784 aa9.75□□□□□ -0.85
UBR3-210ENST00000484596 ZSWIM2Q8NEG5 633 aa9.75□□□□□ -0.85
UBR3-210ENST00000484596 MCMBPQ9BTE3 642 aa9.75□□□□□ -0.85
UBR3-210ENST00000484596 CYP26B1Q9NR63 512 aa9.75□□□□□ -0.85
UBR3-210ENST00000484596 VAMP4O75379 141 aa9.74□□□□□ -0.85
UBR3-210ENST00000484596 TBC1D8O95759 1140 aa9.74□□□□□ -0.85
UBR3-210ENST00000484596 PI3P19957 117 aa9.74□□□□□ -0.85
UBR3-210ENST00000484596 TMEM62Q0P6H9 643 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms