RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 RBM27Q9P2N5 1060 aaKnown RBP18.06■□□□□ 0.48
RPP40-206ENST00000483546 NAP1L2Q9ULW6 460 aaPredicted RBP18.06■□□□□ 0.48
RPP40-206ENST00000483546 FRMPD3Q5JV73 1810 aa18.06■□□□□ 0.48
RPP40-206ENST00000483546 PPP1R11O60927 126 aaPredicted RBP18.05■□□□□ 0.48
RPP40-206ENST00000483546 SGPL1O95470 568 aa18.05■□□□□ 0.48
RPP40-206ENST00000483546 TAL1P17542 331 aaPredicted RBP18.05■□□□□ 0.48
RPP40-206ENST00000483546 CNTN2Q02246 1040 aa18.05■□□□□ 0.48
RPP40-206ENST00000483546 RAB11FIP4Q86YS3 637 aa18.05■□□□□ 0.48
RPP40-206ENST00000483546 TEX2Q8IWB9 1127 aa18.05■□□□□ 0.48
RPP40-206ENST00000483546 IL27Q8NEV9 243 aa18.05■□□□□ 0.48
RPP40-206ENST00000483546 U2AF1L4Q8WU68 220 aaKnown RBP18.05■□□□□ 0.48
RPP40-206ENST00000483546 DEFB118Q96PH6 123 aa18.05■□□□□ 0.48
RPP40-206ENST00000483546 CRISPLD2Q9H0B8 497 aa18.05■□□□□ 0.48
RPP40-206ENST00000483546 ABHD16BQ9H3Z7 469 aa18.05■□□□□ 0.48
RPP40-206ENST00000483546 CNTNAP5Q8WYK1 1306 aa18.04■□□□□ 0.48
RPP40-206ENST00000483546 POTEFA5A3E0 1075 aa18.04■□□□□ 0.48
RPP40-206ENST00000483546 SOWAHBA6NEL2 793 aa18.04■□□□□ 0.48
RPP40-206ENST00000483546 hCG_1984214I3L0E3 225 aa18.04■□□□□ 0.48
RPP40-206ENST00000483546 SEPT4O43236 478 aa18.04■□□□□ 0.48
RPP40-206ENST00000483546 MAPK8IP2Q13387 824 aaPredicted RBP18.04■□□□□ 0.48
RPP40-206ENST00000483546 ARMCX2Q7L311 632 aa18.04■□□□□ 0.48
RPP40-206ENST00000483546 ZNF713Q8N859 430 aaPredicted RBP18.04■□□□□ 0.48
RPP40-206ENST00000483546 MORC4Q8TE76 937 aa18.04■□□□□ 0.48
RPP40-206ENST00000483546 FAM217BQ9NTX9 383 aaPredicted RBP18.04■□□□□ 0.48
RPP40-206ENST00000483546 CALML3P27482 149 aa18.03■□□□□ 0.48
RPP40-206ENST00000483546 PDIA3P30101 505 aaKnown RBP18.03■□□□□ 0.48
RPP40-206ENST00000483546 CCND3P30281 292 aaPredicted RBP18.03■□□□□ 0.48
RPP40-206ENST00000483546 RBM25P49756 843 aaKnown RBP18.03■□□□□ 0.48
RPP40-206ENST00000483546 ALDH5A1P51649 535 aaPredicted RBP18.03■□□□□ 0.48
RPP40-206ENST00000483546 HSD17B4P51659 736 aa18.03■□□□□ 0.48
RPP40-206ENST00000483546 FUT2Q10981 343 aa18.03■□□□□ 0.48
RPP40-206ENST00000483546 SLC30A10Q6XR72 485 aa18.03■□□□□ 0.48
RPP40-206ENST00000483546 ANKLE1Q8NAG6 615 aa18.03■□□□□ 0.48
RPP40-206ENST00000483546 C22orf23Q9BZE7 217 aa18.03■□□□□ 0.48
RPP40-206ENST00000483546 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.03■□□□□ 0.48
RPP40-206ENST00000483546 DDX20Q9UHI6 824 aaKnown RBP18.03■□□□□ 0.48
RPP40-206ENST00000483546 LRRC37A2A6NM11 1700 aa18.03■□□□□ 0.48
RPP40-206ENST00000483546 SNAI1O95863 264 aaPredicted RBP18.02■□□□□ 0.48
RPP40-206ENST00000483546 CNGA1P29973 690 aa18.02■□□□□ 0.48
RPP40-206ENST00000483546 CDC27P30260 824 aa18.02■□□□□ 0.48
RPP40-206ENST00000483546 CMTR1Q8N1G2 835 aaKnown RBP18.02■□□□□ 0.48
RPP40-206ENST00000483546 TRPV1Q8NER1 839 aa18.02■□□□□ 0.48
RPP40-206ENST00000483546 SYTL5Q8TDW5 730 aaPredicted RBP18.02■□□□□ 0.48
RPP40-206ENST00000483546 OGDHLQ9ULD0 1010 aa18.02■□□□□ 0.48
RPP40-206ENST00000483546 GCOM1H8Y6P7 765 aaPredicted RBP18.01■□□□□ 0.47
RPP40-206ENST00000483546 OPLAHO14841 1288 aa18.01■□□□□ 0.47
RPP40-206ENST00000483546 CFBP00751 764 aa18.01■□□□□ 0.47
RPP40-206ENST00000483546 POLR2MP0CAP2 368 aa18.01■□□□□ 0.47
RPP40-206ENST00000483546 ZNF865P0CJ78 1059 aaPredicted RBP18.01■□□□□ 0.47
RPP40-206ENST00000483546 AKR1A1P14550 325 aa18.01■□□□□ 0.47
RPP40-206ENST00000483546 ADD1P35611 737 aaKnown RBP18.01■□□□□ 0.47
RPP40-206ENST00000483546 ACVR2BQ13705 512 aa18.01■□□□□ 0.47
RPP40-206ENST00000483546 PPP1R18Q6NYC8 613 aa18.01■□□□□ 0.47
RPP40-206ENST00000483546 CPLX2Q6PUV4 134 aaKnown RBP18.01■□□□□ 0.47
RPP40-206ENST00000483546 CCDC82Q8N4S0 544 aa18.01■□□□□ 0.47
RPP40-206ENST00000483546 NSUN6Q8TEA1 469 aaKnown RBP18.01■□□□□ 0.47
RPP40-206ENST00000483546 PIBF1Q8WXW3 757 aa18.01■□□□□ 0.47
RPP40-206ENST00000483546 SHISA4Q96DD7 197 aa18.01■□□□□ 0.47
RPP40-206ENST00000483546 IWS1Q96ST2 819 aa18.01■□□□□ 0.47
RPP40-206ENST00000483546 VTA1Q9NP79 307 aa18.01■□□□□ 0.47
RPP40-206ENST00000483546 ASTN1O14525 1302 aa18■□□□□ 0.47
RPP40-206ENST00000483546 PIK3CDO00329 1044 aa18■□□□□ 0.47
RPP40-206ENST00000483546 TFRCP02786 760 aaKnown RBP18■□□□□ 0.47
RPP40-206ENST00000483546 IFNAR1P17181 557 aa18■□□□□ 0.47
RPP40-206ENST00000483546 EN2P19622 333 aaPredicted RBP18■□□□□ 0.47
RPP40-206ENST00000483546 EDNRBP24530 442 aa18■□□□□ 0.47
RPP40-206ENST00000483546 NEK4P51957 841 aa18■□□□□ 0.47
RPP40-206ENST00000483546 LHX8Q68G74 356 aa18■□□□□ 0.47
RPP40-206ENST00000483546 CUL5Q93034 780 aa18■□□□□ 0.47
RPP40-206ENST00000483546 RNF26Q9BY78 433 aaPredicted RBP18■□□□□ 0.47
RPP40-206ENST00000483546 FAM184BQ9ULE4 1060 aa18■□□□□ 0.47
RPP40-206ENST00000483546 PRPF3O43395 683 aaKnown RBP17.99■□□□□ 0.47
RPP40-206ENST00000483546 AK2P54819 239 aa17.99■□□□□ 0.47
RPP40-206ENST00000483546 AKAP17AQ02040 695 aaKnown RBP17.99■□□□□ 0.47
RPP40-206ENST00000483546 PRAMEF19Q5SWL8 479 aa17.99■□□□□ 0.47
RPP40-206ENST00000483546 TBC1D5Q92609 795 aa17.99■□□□□ 0.47
RPP40-206ENST00000483546 KATNBL1Q9H079 304 aa17.99■□□□□ 0.47
RPP40-206ENST00000483546 GLT8D2Q9H1C3 349 aa17.99■□□□□ 0.47
RPP40-206ENST00000483546 ZHX1Q9UKY1 873 aaPredicted RBP17.99■□□□□ 0.47
RPP40-206ENST00000483546 V9GY48 417 aaPredicted RBP17.99■□□□□ 0.47
RPP40-206ENST00000483546 CPLX1O14810 134 aa17.98■□□□□ 0.47
RPP40-206ENST00000483546 RARBP10826 455 aa17.98■□□□□ 0.47
RPP40-206ENST00000483546 PDE4DQ08499 809 aa17.98■□□□□ 0.47
RPP40-206ENST00000483546 NTRK3Q16288 839 aa17.98■□□□□ 0.47
RPP40-206ENST00000483546 PFKFB3Q16875 520 aaPredicted RBP17.98■□□□□ 0.47
RPP40-206ENST00000483546 HEATR3Q7Z4Q2 680 aa17.98■□□□□ 0.47
RPP40-206ENST00000483546 TRIM22Q8IYM9 498 aa17.98■□□□□ 0.47
RPP40-206ENST00000483546 CCDC12Q8WUD4 166 aaPredicted RBP17.98■□□□□ 0.47
RPP40-206ENST00000483546 RMDN3Q96TC7 470 aa17.98■□□□□ 0.47
RPP40-206ENST00000483546 SLKQ9H2G2 1235 aaPredicted RBP17.98■□□□□ 0.47
RPP40-206ENST00000483546 KIAA1217Q5T5P2 1943 aa17.98■□□□□ 0.47
RPP40-206ENST00000483546 PFKFB2O60825 505 aa17.97■□□□□ 0.47
RPP40-206ENST00000483546 CDKL5O76039 1030 aa17.97■□□□□ 0.47
RPP40-206ENST00000483546 SCG2P13521 617 aa17.97■□□□□ 0.47
RPP40-206ENST00000483546 CCT2P78371 535 aaKnown RBP17.97■□□□□ 0.47
RPP40-206ENST00000483546 ARHGEF16Q5VV41 709 aa17.97■□□□□ 0.47
RPP40-206ENST00000483546 ARRDC4Q8NCT1 418 aa17.97■□□□□ 0.47
RPP40-206ENST00000483546 PURBQ96QR8 312 aaKnown RBP17.97■□□□□ 0.47
RPP40-206ENST00000483546 TAAR1Q96RJ0 339 aa17.97■□□□□ 0.47
RPP40-206ENST00000483546 PSTPIP2Q9H939 334 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms