RNA–Protein interactions for RNA: ENST00000483415.5

EWSR1-217, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 3,231 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-217ENST00000483415 SMC1BQ8NDV3 1235 aa12.2□□□□□ -0.46
EWSR1-217ENST00000483415 RRP36Q96EU6 259 aaKnown RBP12.2□□□□□ -0.46
EWSR1-217ENST00000483415 WRNIP1Q96S55 665 aa12.2□□□□□ -0.46
EWSR1-217ENST00000483415 EIF3CQ99613 913 aaKnown RBP12.2□□□□□ -0.46
EWSR1-217ENST00000483415 LARP6Q9BRS8 491 aaKnown RBP12.2□□□□□ -0.46
EWSR1-217ENST00000483415 FUT8Q9BYC5 575 aa12.2□□□□□ -0.46
EWSR1-217ENST00000483415 LRRC2Q9BYS8 371 aa12.2□□□□□ -0.46
EWSR1-217ENST00000483415 PNMA6FA0A0J9YX94 578 aa12.19□□□□□ -0.46
EWSR1-217ENST00000483415 TUBB4AP04350 444 aa12.19□□□□□ -0.46
EWSR1-217ENST00000483415 NOM1Q5C9Z4 860 aaKnown RBP12.19□□□□□ -0.46
EWSR1-217ENST00000483415 C11orf57Q6ZUT1 292 aaPredicted RBP12.19□□□□□ -0.46
EWSR1-217ENST00000483415 MICU3Q86XE3 530 aa12.19□□□□□ -0.46
EWSR1-217ENST00000483415 MB21D1Q8N884 522 aa12.19□□□□□ -0.46
EWSR1-217ENST00000483415 GPATCH11Q8N954 259 aa12.19□□□□□ -0.46
EWSR1-217ENST00000483415 BICD2Q8TD16 824 aa12.19□□□□□ -0.46
EWSR1-217ENST00000483415 ZKSCAN3Q9BRR0 538 aa12.19□□□□□ -0.46
EWSR1-217ENST00000483415 CXorf56Q9H5V9 222 aa12.19□□□□□ -0.46
EWSR1-217ENST00000483415 STX8Q9UNK0 236 aa12.19□□□□□ -0.46
EWSR1-217ENST00000483415 PHLPP2Q6ZVD8 1323 aa12.19□□□□□ -0.46
EWSR1-217ENST00000483415 MPHOSPH10O00566 681 aaKnown RBP12.19□□□□□ -0.46
EWSR1-217ENST00000483415 NMT2O60551 498 aa12.19□□□□□ -0.46
EWSR1-217ENST00000483415 ITGBL1O95965 494 aaPredicted RBP12.19□□□□□ -0.46
EWSR1-217ENST00000483415 NDUFB10O96000 172 aa12.19□□□□□ -0.46
EWSR1-217ENST00000483415 SCG2P13521 617 aa12.19□□□□□ -0.46
EWSR1-217ENST00000483415 CORO7P57737 925 aa12.19□□□□□ -0.46
EWSR1-217ENST00000483415 AKAP17AQ02040 695 aaKnown RBP12.19□□□□□ -0.46
EWSR1-217ENST00000483415 FASTKD5Q7L8L6 764 aaKnown RBP12.19□□□□□ -0.46
EWSR1-217ENST00000483415 SRBD1Q8N5C6 995 aaKnown RBP12.19□□□□□ -0.46
EWSR1-217ENST00000483415 TCEANC2Q96MN5 208 aa12.19□□□□□ -0.46
EWSR1-217ENST00000483415 NAP1L4Q99733 375 aaKnown RBP12.19□□□□□ -0.46
EWSR1-217ENST00000483415 PHF20Q9BVI0 1012 aa12.19□□□□□ -0.46
EWSR1-217ENST00000483415 RRAGCQ9HB90 399 aa12.19□□□□□ -0.46
EWSR1-217ENST00000483415 GPHNQ9NQX3 736 aaPredicted RBP12.19□□□□□ -0.46
EWSR1-217ENST00000483415 LRRC37A2A6NM11 1700 aa12.19□□□□□ -0.46
EWSR1-217ENST00000483415 EFCAB8A8MWE9 144 aa12.18□□□□□ -0.46
EWSR1-217ENST00000483415 KLRF2D3W0D1 207 aa12.18□□□□□ -0.46
EWSR1-217ENST00000483415 IVLP07476 585 aa12.18□□□□□ -0.46
EWSR1-217ENST00000483415 TRAPPC10P48553 1259 aa12.18□□□□□ -0.46
EWSR1-217ENST00000483415 LMAN1P49257 510 aa12.18□□□□□ -0.46
EWSR1-217ENST00000483415 PKN1Q16512 942 aa12.18□□□□□ -0.46
EWSR1-217ENST00000483415 UBXN4Q92575 508 aa12.18□□□□□ -0.46
EWSR1-217ENST00000483415 BARHL2Q9NY43 387 aa12.18□□□□□ -0.46
EWSR1-217ENST00000483415 ABCB11O95342 1321 aa12.18□□□□□ -0.46
EWSR1-217ENST00000483415 NR1I2O75469 434 aa12.18□□□□□ -0.46
EWSR1-217ENST00000483415 KRT85P78386 507 aa12.18□□□□□ -0.46
EWSR1-217ENST00000483415 JAG1P78504 1218 aa12.18□□□□□ -0.46
EWSR1-217ENST00000483415 RABGAP1Q9Y3P9 1069 aa12.18□□□□□ -0.46
EWSR1-217ENST00000483415 ADM5C9JUS6 153 aa12.18□□□□□ -0.46
EWSR1-217ENST00000483415 DTNBO60941 627 aa12.18□□□□□ -0.46
EWSR1-217ENST00000483415 TRIM65Q6PJ69 517 aa12.18□□□□□ -0.46
EWSR1-217ENST00000483415 DHX40Q8IX18 779 aaKnown RBP12.18□□□□□ -0.46
EWSR1-217ENST00000483415 C2orf69Q8N8R5 385 aa12.18□□□□□ -0.46
EWSR1-217ENST00000483415 LOXHD1Q8IVV2 1947 aa12.18□□□□□ -0.46
EWSR1-217ENST00000483415 MAP2K7O14733 419 aa12.17□□□□□ -0.46
EWSR1-217ENST00000483415 ZBTB5O15062 677 aa12.17□□□□□ -0.46
EWSR1-217ENST00000483415 SLC1A4P43007 532 aa12.17□□□□□ -0.46
EWSR1-217ENST00000483415 TRIM29Q14134 588 aa12.17□□□□□ -0.46
EWSR1-217ENST00000483415 SYDE2Q5VT97 1194 aa12.17□□□□□ -0.46
EWSR1-217ENST00000483415 CCDC34Q96HJ3 373 aa12.17□□□□□ -0.46
EWSR1-217ENST00000483415 ZMYND12Q9H0C1 365 aa12.17□□□□□ -0.46
EWSR1-217ENST00000483415 A0A1W2PRG0 241 aa12.17□□□□□ -0.46
EWSR1-217ENST00000483415 PIK3CDO00329 1044 aa12.17□□□□□ -0.46
EWSR1-217ENST00000483415 GDF11O95390 407 aa12.17□□□□□ -0.46
EWSR1-217ENST00000483415 BMP15O95972 392 aa12.17□□□□□ -0.46
EWSR1-217ENST00000483415 MMP1P03956 469 aa12.17□□□□□ -0.46
EWSR1-217ENST00000483415 TPM1P09493 284 aa12.17□□□□□ -0.46
EWSR1-217ENST00000483415 STAT2P52630 851 aa12.17□□□□□ -0.46
EWSR1-217ENST00000483415 GSDMDP57764 484 aa12.17□□□□□ -0.46
EWSR1-217ENST00000483415 VGLL4Q14135 290 aa12.17□□□□□ -0.46
EWSR1-217ENST00000483415 LARP1BQ659C4 914 aaKnown RBP12.17□□□□□ -0.46
EWSR1-217ENST00000483415 CCDC91Q7Z6B0 441 aa12.17□□□□□ -0.46
EWSR1-217ENST00000483415 NECAB1Q8N987 351 aa12.17□□□□□ -0.46
EWSR1-217ENST00000483415 PPM1EQ8WY54 764 aa12.17□□□□□ -0.46
EWSR1-217ENST00000483415 GBA2Q9HCG7 927 aaPredicted RBP12.17□□□□□ -0.46
EWSR1-217ENST00000483415 SEC63Q9UGP8 760 aaKnown RBP12.17□□□□□ -0.46
EWSR1-217ENST00000483415 USP17L15C9J2P7 530 aa12.16□□□□□ -0.46
EWSR1-217ENST00000483415 USP17L13C9JLJ4 530 aa12.16□□□□□ -0.46
EWSR1-217ENST00000483415 USP17L11C9JVI0 530 aa12.16□□□□□ -0.46
EWSR1-217ENST00000483415 USP17L18D6R9N7 530 aa12.16□□□□□ -0.46
EWSR1-217ENST00000483415 USP17L22D6RA61 530 aa12.16□□□□□ -0.46
EWSR1-217ENST00000483415 USP17L17D6RBQ6 530 aa12.16□□□□□ -0.46
EWSR1-217ENST00000483415 USP17L19D6RCP7 530 aa12.16□□□□□ -0.46
EWSR1-217ENST00000483415 USP17L20D6RJB6 530 aa12.16□□□□□ -0.46
EWSR1-217ENST00000483415 ADD1P35611 737 aaKnown RBP12.16□□□□□ -0.46
EWSR1-217ENST00000483415 USP17L24Q0WX57 530 aa12.16□□□□□ -0.46
EWSR1-217ENST00000483415 PGBD1Q96JS3 809 aa12.16□□□□□ -0.46
EWSR1-217ENST00000483415 C8orf76Q96K31 380 aa12.16□□□□□ -0.46
EWSR1-217ENST00000483415 CEP89Q96ST8 783 aa12.16□□□□□ -0.46
EWSR1-217ENST00000483415 SRRTQ9BXP5 876 aaKnown RBP12.16□□□□□ -0.46
EWSR1-217ENST00000483415 EPC1Q9H2F5 836 aa12.16□□□□□ -0.46
EWSR1-217ENST00000483415 TMOD4Q9NZQ9 345 aa12.16□□□□□ -0.46
EWSR1-217ENST00000483415 M0R2N6 131 aa12.16□□□□□ -0.46
EWSR1-217ENST00000483415 SLC26A4O43511 780 aa12.16□□□□□ -0.46
EWSR1-217ENST00000483415 GNA11P29992 359 aa12.16□□□□□ -0.46
EWSR1-217ENST00000483415 INHBEP58166 350 aa12.16□□□□□ -0.46
EWSR1-217ENST00000483415 ARMCX5Q6P1M9 558 aa12.16□□□□□ -0.46
EWSR1-217ENST00000483415 ALG1Q9BT22 464 aa12.16□□□□□ -0.46
EWSR1-217ENST00000483415 DEF6Q9H4E7 631 aa12.16□□□□□ -0.46
EWSR1-217ENST00000483415 KIF3CO14782 793 aa12.16□□□□□ -0.46
EWSR1-217ENST00000483415 ETF1P62495 437 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms