RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 RABGAP1Q9Y3P9 1069 aa7.13□□□□□ -1.27
CSDE1-207ENST00000483407 USP3Q9Y6I4 520 aa7.13□□□□□ -1.27
CSDE1-207ENST00000483407 CEP290O15078 2479 aa7.13□□□□□ -1.27
CSDE1-207ENST00000483407 RANBP2P49792 3224 aaKnown RBP7.12□□□□□ -1.27
CSDE1-207ENST00000483407 ZIC2O95409 532 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-207ENST00000483407 GH2P01242 217 aa7.12□□□□□ -1.27
CSDE1-207ENST00000483407 SYN1P17600 705 aa7.12□□□□□ -1.27
CSDE1-207ENST00000483407 MAGEA10P43363 369 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-207ENST00000483407 DYNLL1P63167 89 aaKnown RBP7.12□□□□□ -1.27
CSDE1-207ENST00000483407 JAG1P78504 1218 aa7.12□□□□□ -1.27
CSDE1-207ENST00000483407 CENPCQ03188 943 aa7.12□□□□□ -1.27
CSDE1-207ENST00000483407 CACNB2Q08289 660 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-207ENST00000483407 MAP3K12Q12852 859 aa7.12□□□□□ -1.27
CSDE1-207ENST00000483407 RAB3GAP1Q15042 981 aa7.12□□□□□ -1.27
CSDE1-207ENST00000483407 TEAD4Q15561 434 aa7.12□□□□□ -1.27
CSDE1-207ENST00000483407 LRIT3Q3SXY7 679 aa7.12□□□□□ -1.27
CSDE1-207ENST00000483407 PKDCCQ504Y2 493 aa7.12□□□□□ -1.27
CSDE1-207ENST00000483407 WDR78Q5VTH9 848 aa7.12□□□□□ -1.27
CSDE1-207ENST00000483407 MFSD14CQ5VZR4 134 aa7.12□□□□□ -1.27
CSDE1-207ENST00000483407 TDHQ8IZJ6 230 aa7.12□□□□□ -1.27
CSDE1-207ENST00000483407 ZNF295-AS1Q8N0V1 137 aa7.12□□□□□ -1.27
CSDE1-207ENST00000483407 MIGA1Q8NAN2 632 aa7.12□□□□□ -1.27
CSDE1-207ENST00000483407 C12orf42Q96LP6 360 aa7.12□□□□□ -1.27
CSDE1-207ENST00000483407 ASB16Q96NS5 453 aa7.12□□□□□ -1.27
CSDE1-207ENST00000483407 UBE2OQ9C0C9 1292 aaKnown RBP7.12□□□□□ -1.27
CSDE1-207ENST00000483407 EHD4Q9H223 541 aa7.12□□□□□ -1.27
CSDE1-207ENST00000483407 PORCNQ9H237 461 aa7.12□□□□□ -1.27
CSDE1-207ENST00000483407 CABP5Q9NP86 173 aa7.12□□□□□ -1.27
CSDE1-207ENST00000483407 PIH1D3Q9NQM4 214 aaKnown RBP7.12□□□□□ -1.27
CSDE1-207ENST00000483407 DBNLQ9UJU6 430 aaKnown RBP7.12□□□□□ -1.27
CSDE1-207ENST00000483407 TNNQ9UQP3 1299 aa7.12□□□□□ -1.27
CSDE1-207ENST00000483407 NOP58Q9Y2X3 529 aaKnown RBP7.12□□□□□ -1.27
CSDE1-207ENST00000483407 MGAMO43451 1857 aa7.11□□□□□ -1.27
CSDE1-207ENST00000483407 PFASO15067 1338 aa7.11□□□□□ -1.27
CSDE1-207ENST00000483407 J3QL48 77 aa7.11□□□□□ -1.27
CSDE1-207ENST00000483407 MSCO60682 206 aa7.11□□□□□ -1.27
CSDE1-207ENST00000483407 PEX10O60683 326 aa7.11□□□□□ -1.27
CSDE1-207ENST00000483407 COL6A1P12109 1028 aa7.11□□□□□ -1.27
CSDE1-207ENST00000483407 MAPK1P28482 360 aa7.11□□□□□ -1.27
CSDE1-207ENST00000483407 CCND3P30281 292 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-207ENST00000483407 INSM1Q01101 510 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-207ENST00000483407 ZYXQ15942 572 aaKnown RBP7.11□□□□□ -1.27
CSDE1-207ENST00000483407 CCL14Q16627 93 aa7.11□□□□□ -1.27
CSDE1-207ENST00000483407 ABCB5Q2M3G0 1257 aa7.11□□□□□ -1.27
CSDE1-207ENST00000483407 SHROOM1Q2M3G4 852 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-207ENST00000483407 CERKLQ49MI3 558 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-207ENST00000483407 COX20Q5RI15 118 aa7.11□□□□□ -1.27
CSDE1-207ENST00000483407 TATDN1Q6P1N9 297 aa7.11□□□□□ -1.27
CSDE1-207ENST00000483407 ERC1Q8IUD2 1116 aa7.11□□□□□ -1.27
CSDE1-207ENST00000483407 ITPRIPQ8IWB1 547 aa7.11□□□□□ -1.27
CSDE1-207ENST00000483407 DEFB123Q8N688 67 aa7.11□□□□□ -1.27
CSDE1-207ENST00000483407 MAGEB6Q8N7X4 407 aa7.11□□□□□ -1.27
CSDE1-207ENST00000483407 USP6NLQ92738 828 aa7.11□□□□□ -1.27
CSDE1-207ENST00000483407 EDC3Q96F86 508 aaKnown RBP7.11□□□□□ -1.27
CSDE1-207ENST00000483407 MYO19Q96H55 970 aa7.11□□□□□ -1.27
CSDE1-207ENST00000483407 KIAA1683Q9H0B3 1180 aa7.11□□□□□ -1.27
CSDE1-207ENST00000483407 CCDC8Q9H0W5 538 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-207ENST00000483407 ZFAND3Q9H8U3 227 aa7.11□□□□□ -1.27
CSDE1-207ENST00000483407 TOR4AQ9NXH8 423 aa7.11□□□□□ -1.27
CSDE1-207ENST00000483407 PHIPQ8WWQ0 1821 aa7.11□□□□□ -1.27
CSDE1-207ENST00000483407 LOC285556D6RIA3 1793 aa7.1□□□□□ -1.27
CSDE1-207ENST00000483407 PTPRFP10586 1907 aa7.1□□□□□ -1.27
CSDE1-207ENST00000483407 SLC15A5A6NIM6 579 aa7.1□□□□□ -1.27
CSDE1-207ENST00000483407 EML1O00423 815 aa7.1□□□□□ -1.27
CSDE1-207ENST00000483407 POLR3DP05423 398 aaPredicted RBP7.1□□□□□ -1.27
CSDE1-207ENST00000483407 TIMP2P16035 220 aa7.1□□□□□ -1.27
CSDE1-207ENST00000483407 VCAM1P19320 739 aa7.1□□□□□ -1.27
CSDE1-207ENST00000483407 MPSTP25325 297 aa7.1□□□□□ -1.27
CSDE1-207ENST00000483407 CNGA1P29973 690 aa7.1□□□□□ -1.27
CSDE1-207ENST00000483407 NOS2P35228 1153 aa7.1□□□□□ -1.27
CSDE1-207ENST00000483407 WDR4P57081 412 aaKnown RBP7.1□□□□□ -1.27
CSDE1-207ENST00000483407 ATP2B2Q01814 1243 aa7.1□□□□□ -1.27
CSDE1-207ENST00000483407 TTF1Q15361 905 aaPredicted RBP7.1□□□□□ -1.27
CSDE1-207ENST00000483407 HSP90AB4PQ58FF6 505 aa7.1□□□□□ -1.27
CSDE1-207ENST00000483407 LBX2Q6XYB7 198 aa7.1□□□□□ -1.27
CSDE1-207ENST00000483407 CATSPERGQ6ZRH7 1159 aa7.1□□□□□ -1.27
CSDE1-207ENST00000483407 EAF2Q96CJ1 260 aaPredicted RBP7.1□□□□□ -1.27
CSDE1-207ENST00000483407 LBHD1Q9BQE6 289 aaPredicted RBP7.1□□□□□ -1.27
CSDE1-207ENST00000483407 TLR7Q9NYK1 1049 aaKnown RBP7.1□□□□□ -1.27
CSDE1-207ENST00000483407 STIM2Q9P246 746 aa7.1□□□□□ -1.27
CSDE1-207ENST00000483407 PRKAG2Q9UGJ0 569 aa7.1□□□□□ -1.27
CSDE1-207ENST00000483407 DDX20Q9UHI6 824 aaKnown RBP7.1□□□□□ -1.27
CSDE1-207ENST00000483407 LAMA3Q16787 3333 aa7.09□□□□□ -1.27
CSDE1-207ENST00000483407 SERTM1A2A2V5 107 aa7.09□□□□□ -1.27
CSDE1-207ENST00000483407 TTC24A2A3L6 582 aaPredicted RBP7.09□□□□□ -1.27
CSDE1-207ENST00000483407 TNFRSF10BO14763 440 aa7.09□□□□□ -1.27
CSDE1-207ENST00000483407 CNMDO75829 334 aa7.09□□□□□ -1.27
CSDE1-207ENST00000483407 HOXC6P09630 235 aa7.09□□□□□ -1.27
CSDE1-207ENST00000483407 ZNF16P17020 682 aaPredicted RBP7.09□□□□□ -1.27
CSDE1-207ENST00000483407 GRB14Q14449 540 aa7.09□□□□□ -1.27
CSDE1-207ENST00000483407 LRRC26Q2I0M4 334 aa7.09□□□□□ -1.27
CSDE1-207ENST00000483407 DPP9Q86TI2 863 aa7.09□□□□□ -1.27
CSDE1-207ENST00000483407 AACSQ86V21 672 aa7.09□□□□□ -1.27
CSDE1-207ENST00000483407 RGL4Q8IZJ4 473 aa7.09□□□□□ -1.27
CSDE1-207ENST00000483407 CYP4X1Q8N118 509 aa7.09□□□□□ -1.27
CSDE1-207ENST00000483407 ACER1Q8TDN7 264 aa7.09□□□□□ -1.27
CSDE1-207ENST00000483407 ZDHHC1Q8WTX9 485 aa7.09□□□□□ -1.27
CSDE1-207ENST00000483407 LPAR1Q92633 364 aa7.09□□□□□ -1.27
CSDE1-207ENST00000483407 AGBL1Q96MI9 1066 aa7.09□□□□□ -1.27
CSDE1-207ENST00000483407 RBCK1Q9BYM8 510 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms