RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 ZNHIT6Q9NWK9 470 aaKnown RBP8.62□□□□□ -1.03
COL4A5-205ENST00000483338 STIM2Q9P246 746 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 CNOT8Q9UFF9 292 aaKnown RBP8.62□□□□□ -1.03
COL4A5-205ENST00000483338 ABCF2Q9UG63 623 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 SYNRGQ9UMZ2 1314 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 TMEM94Q12767 1356 aa8.62□□□□□ -1.03
COL4A5-205ENST00000483338 LSM1O15116 133 aaKnown RBP8.61□□□□□ -1.03
COL4A5-205ENST00000483338 PAEPP09466 180 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 ZFXP17010 805 aaPredicted RBP8.61□□□□□ -1.03
COL4A5-205ENST00000483338 VARSP26640 1264 aaKnown RBP8.61□□□□□ -1.03
COL4A5-205ENST00000483338 PBX1P40424 430 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 PTF1AQ7RTS3 328 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 APTXQ7Z2E3 356 aaKnown RBP8.61□□□□□ -1.03
COL4A5-205ENST00000483338 NANOGNBQ7Z5D8 188 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 NOC3LQ8WTT2 800 aaKnown RBP8.61□□□□□ -1.03
COL4A5-205ENST00000483338 DDX27Q96GQ7 796 aaKnown RBP8.61□□□□□ -1.03
COL4A5-205ENST00000483338 MED15Q96RN5 788 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 TMBIM4Q9HC24 238 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 ATP8A2Q9NTI2 1148 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 HSFX1Q9UBD0 423 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 WWC3Q9ULE0 1092 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 EFR3BQ9Y2G0 817 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 DLG5Q8TDM6 1919 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 NDUFB5O43674 189 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 RARAP10276 462 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 CLCN2P51788 898 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 TMTC1Q8IUR5 882 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 CTNNBL1Q8WYA6 563 aaPredicted RBP8.61□□□□□ -1.03
COL4A5-205ENST00000483338 LZICQ8WZA0 190 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 NCSTNQ92542 709 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 PTPRN2Q92932 1015 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 FAM136AQ96C01 138 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 CARD9Q9H257 536 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 VCXQ9H320 206 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.61□□□□□ -1.03
COL4A5-205ENST00000483338 TRIM43BA6NCK2 446 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 RNF225M0QZC1 329 aaPredicted RBP8.61□□□□□ -1.03
COL4A5-205ENST00000483338 SPTLC2O15270 562 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 ORC4O43929 436 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 CTDNEP1O95476 244 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 KCNA4P22459 653 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 RHBDL3P58872 404 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 HAUS3Q68CZ6 603 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 RUFY4Q6ZNE9 571 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 CCNJLQ8IV13 435 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 MYOCDQ8IZQ8 938 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 KIF2BQ8N4N8 673 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 RNF25Q96BH1 459 aaPredicted RBP8.61□□□□□ -1.03
COL4A5-205ENST00000483338 TSKSQ9UJT2 592 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 CHMP2BQ9UQN3 213 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 STK38LQ9Y2H1 464 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 SH3GLB1Q9Y371 365 aa8.61□□□□□ -1.03
COL4A5-205ENST00000483338 ARHGAP23Q9P227 1491 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 AFF2P51816 1311 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 TMEM247A6NEH6 219 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 BAG3O95817 575 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 HNRNPCP07910 306 aaKnown RBP eCLIP8.6□□□□□ -1.03
COL4A5-205ENST00000483338 HARSP12081 509 aaKnown RBP8.6□□□□□ -1.03
COL4A5-205ENST00000483338 CMA1P23946 247 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 YY1P25490 414 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 TNFRSF8P28908 595 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 HOXA10P31260 410 aaPredicted RBP8.6□□□□□ -1.03
COL4A5-205ENST00000483338 HOXD11P31277 338 aaPredicted RBP8.6□□□□□ -1.03
COL4A5-205ENST00000483338 CCNFP41002 786 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 TRPC1P48995 793 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 IQCEQ6IPM2 695 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 MIGA2Q7L4E1 593 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 METTL16Q86W50 562 aaKnown RBP8.6□□□□□ -1.03
COL4A5-205ENST00000483338 KCNG4Q8TDN1 519 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 ORAI2Q96SN7 254 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 VCX3BQ9H321 246 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 VCX3AQ9NNX9 186 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 UBAP1Q9NZ09 502 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 CIDEBQ9UHD4 219 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 SPO11Q9Y5K1 396 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 QRICH2Q9H0J4 1663 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 ADGRB1O14514 1584 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 UBAP1LF5GYI3 381 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 ATP9BO43861 1147 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 MATR3P43243 847 aaKnown RBP eCLIP8.6□□□□□ -1.03
COL4A5-205ENST00000483338 MSH2P43246 934 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 SERPINB4P48594 390 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 ZC3H6P61129 1189 aaKnown RBP8.6□□□□□ -1.03
COL4A5-205ENST00000483338 CLPPQ16740 277 aaPredicted RBP8.6□□□□□ -1.03
COL4A5-205ENST00000483338 C3orf67Q6ZVT6 689 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 CREG2Q8IUH2 290 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 CNGA4Q8IV77 575 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 ERMNQ8TAM6 284 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 ANKRD24Q8TF21 1146 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 ABCF3Q9NUQ8 709 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 NFU1Q9UMS0 254 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 PCDHA5Q9Y5H7 936 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 GSTA2P09210 222 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 MLH1P40692 756 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 SYKP43405 635 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 CARSP49589 748 aaKnown RBP8.6□□□□□ -1.03
COL4A5-205ENST00000483338 PEX5P50542 639 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 GUCY2DQ02846 1103 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 GSTM4Q03013 218 aa8.6□□□□□ -1.03
COL4A5-205ENST00000483338 CNPY1Q3B7I2 92 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms