RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 ORC4O43929 436 aa16.42■□□□□ 0.22
VARS-226ENST00000483275 PLA2G6O60733 806 aa16.42■□□□□ 0.22
VARS-226ENST00000483275 MYOGP15173 224 aa16.42■□□□□ 0.22
VARS-226ENST00000483275 ALDH5A1P51649 535 aaPredicted RBP16.42■□□□□ 0.22
VARS-226ENST00000483275 ADGRE1Q14246 886 aa16.42■□□□□ 0.22
VARS-226ENST00000483275 CCDC85BQ15834 202 aaPredicted RBP16.42■□□□□ 0.22
VARS-226ENST00000483275 DCAF4Q8WV16 495 aa16.42■□□□□ 0.22
VARS-226ENST00000483275 TRMT13Q9NUP7 481 aaKnown RBP16.42■□□□□ 0.22
VARS-226ENST00000483275 SCN10AQ9Y5Y9 1956 aa16.42■□□□□ 0.22
VARS-226ENST00000483275 CYP2C9P11712 490 aa16.41■□□□□ 0.22
VARS-226ENST00000483275 CALML3P27482 149 aa16.41■□□□□ 0.22
VARS-226ENST00000483275 RRP1P56182 461 aaKnown RBP16.41■□□□□ 0.22
VARS-226ENST00000483275 NMIQ13287 307 aaPredicted RBP16.41■□□□□ 0.22
VARS-226ENST00000483275 PPP4R3BQ5MIZ7 849 aa16.41■□□□□ 0.22
VARS-226ENST00000483275 TBC1D10CQ8IV04 446 aa16.41■□□□□ 0.22
VARS-226ENST00000483275 HERVK_113Q902F9 699 aa16.41■□□□□ 0.22
VARS-226ENST00000483275 EVI5LQ96CN4 794 aa16.41■□□□□ 0.22
VARS-226ENST00000483275 VWCEQ96DN2 955 aa16.41■□□□□ 0.22
VARS-226ENST00000483275 GAS2L1Q99501 681 aaPredicted RBP16.41■□□□□ 0.22
VARS-226ENST00000483275 CPVLQ9H3G5 476 aa16.41■□□□□ 0.22
VARS-226ENST00000483275 VTA1Q9NP79 307 aa16.41■□□□□ 0.22
VARS-226ENST00000483275 NCOR1O75376 2440 aa16.4■□□□□ 0.22
VARS-226ENST00000483275 FGAP02671 866 aa16.4■□□□□ 0.22
VARS-226ENST00000483275 MYL3P08590 195 aa16.4■□□□□ 0.22
VARS-226ENST00000483275 TOP1P11387 765 aaKnown RBP16.4■□□□□ 0.22
VARS-226ENST00000483275 IGFBP4P22692 258 aa16.4■□□□□ 0.22
VARS-226ENST00000483275 NOVP48745 357 aa16.4■□□□□ 0.22
VARS-226ENST00000483275 PDE1AP54750 535 aa16.4■□□□□ 0.22
VARS-226ENST00000483275 IQSEC1Q6DN90 963 aa16.4■□□□□ 0.22
VARS-226ENST00000483275 CLEC4DQ8WXI8 215 aa16.4■□□□□ 0.22
VARS-226ENST00000483275 COPS5Q92905 334 aa16.4■□□□□ 0.22
VARS-226ENST00000483275 WDR11Q9BZH6 1224 aa16.4■□□□□ 0.22
VARS-226ENST00000483275 ALDH8A1Q9H2A2 487 aaPredicted RBP16.4■□□□□ 0.22
VARS-226ENST00000483275 PTPRSQ13332 1948 aa16.4■□□□□ 0.22
VARS-226ENST00000483275 XIRP2A4UGR9 3374 aa16.4■□□□□ 0.22
VARS-226ENST00000483275 TET1Q8NFU7 2136 aa16.39■□□□□ 0.21
VARS-226ENST00000483275 TRIP12Q14669 1992 aaPredicted RBP16.39■□□□□ 0.21
VARS-226ENST00000483275 ZBBXA8MT70 800 aa16.39■□□□□ 0.21
VARS-226ENST00000483275 ZEB2O60315 1214 aa16.39■□□□□ 0.21
VARS-226ENST00000483275 CABYRO75952 493 aa16.39■□□□□ 0.21
VARS-226ENST00000483275 FGBP02675 491 aa16.39■□□□□ 0.21
VARS-226ENST00000483275 HSPD1P10809 573 aaKnown RBP16.39■□□□□ 0.21
VARS-226ENST00000483275 PDHBP11177 359 aa16.39■□□□□ 0.21
VARS-226ENST00000483275 DEFB128Q7Z7B8 93 aa16.39■□□□□ 0.21
VARS-226ENST00000483275 OR6J1Q8NGC5 347 aa16.39■□□□□ 0.21
VARS-226ENST00000483275 MORC4Q8TE76 937 aa16.39■□□□□ 0.21
VARS-226ENST00000483275 ZKSCAN3Q9BRR0 538 aa16.39■□□□□ 0.21
VARS-226ENST00000483275 HELLSQ9NRZ9 838 aa16.39■□□□□ 0.21
VARS-226ENST00000483275 ZBTB47Q9UFB7 747 aaPredicted RBP16.39■□□□□ 0.21
VARS-226ENST00000483275 MSRAQ9UJ68 235 aa16.39■□□□□ 0.21
VARS-226ENST00000483275 NEDD4P46934 1319 aa16.39■□□□□ 0.21
VARS-226ENST00000483275 TCF20Q9UGU0 1960 aaKnown RBP16.38■□□□□ 0.21
VARS-226ENST00000483275 FGRP09769 529 aa16.38■□□□□ 0.21
VARS-226ENST00000483275 GOLGA8HP0CJ92 632 aa16.38■□□□□ 0.21
VARS-226ENST00000483275 CHMP4BP1P59074 171 aa16.38■□□□□ 0.21
VARS-226ENST00000483275 PURAQ00577 322 aaKnown RBP16.38■□□□□ 0.21
VARS-226ENST00000483275 TTLL4Q14679 1199 aa16.38■□□□□ 0.21
VARS-226ENST00000483275 ALX1Q15699 326 aa16.38■□□□□ 0.21
VARS-226ENST00000483275 USH1GQ495M9 461 aa16.38■□□□□ 0.21
VARS-226ENST00000483275 DUSP28Q4G0W2 176 aa16.38■□□□□ 0.21
VARS-226ENST00000483275 FAM47CQ5HY64 1035 aa16.38■□□□□ 0.21
VARS-226ENST00000483275 BTNL9Q6UXG8 535 aa16.38■□□□□ 0.21
VARS-226ENST00000483275 MICALL1Q8N3F8 863 aa16.38■□□□□ 0.21
VARS-226ENST00000483275 LNPKQ9C0E8 428 aa16.38■□□□□ 0.21
VARS-226ENST00000483275 KIAA1217Q5T5P2 1943 aa16.38■□□□□ 0.21
VARS-226ENST00000483275 TNKSO95271 1327 aa16.38■□□□□ 0.21
VARS-226ENST00000483275 COL4A4P53420 1690 aaPredicted RBP16.37■□□□□ 0.21
VARS-226ENST00000483275 PRRC2BQ5JSZ5 2229 aaKnown RBP16.37■□□□□ 0.21
VARS-226ENST00000483275 ZNF543Q08ER8 600 aa16.37■□□□□ 0.21
VARS-226ENST00000483275 RAB30Q15771 203 aa16.37■□□□□ 0.21
VARS-226ENST00000483275 MCMDC2Q4G0Z9 681 aa16.37■□□□□ 0.21
VARS-226ENST00000483275 TJAP1Q5JTD0 557 aa16.37■□□□□ 0.21
VARS-226ENST00000483275 RNF207Q6ZRF8 634 aa16.37■□□□□ 0.21
VARS-226ENST00000483275 ADD3Q9UEY8 706 aaKnown RBP16.37■□□□□ 0.21
VARS-226ENST00000483275 CCDC171Q6TFL3 1326 aa16.37■□□□□ 0.21
VARS-226ENST00000483275 TRIM6-TRIM34B2RNG4 842 aa16.36■□□□□ 0.21
VARS-226ENST00000483275 RPS6P62753 249 aaKnown RBP16.36■□□□□ 0.21
VARS-226ENST00000483275 PDE4DQ08499 809 aa16.36■□□□□ 0.21
VARS-226ENST00000483275 PPP2R5BQ15173 497 aa16.36■□□□□ 0.21
VARS-226ENST00000483275 RILPL2Q969X0 211 aa16.36■□□□□ 0.21
VARS-226ENST00000483275 MTIF3Q9H2K0 278 aaKnown RBP16.36■□□□□ 0.21
VARS-226ENST00000483275 SLC28A3Q9HAS3 691 aa16.36■□□□□ 0.21
VARS-226ENST00000483275 Q9Y3F1 56 aa16.36■□□□□ 0.21
VARS-226ENST00000483275 SLC4A7Q9Y6M7 1214 aa16.36■□□□□ 0.21
VARS-226ENST00000483275 ARIH2O95376 493 aa16.35■□□□□ 0.21
VARS-226ENST00000483275 NBPF20Q3BBV1 942 aa16.35■□□□□ 0.21
VARS-226ENST00000483275 PPP2R2DQ66LE6 453 aa16.35■□□□□ 0.21
VARS-226ENST00000483275 UBA5Q9GZZ9 404 aa16.35■□□□□ 0.21
VARS-226ENST00000483275 CERS4Q9HA82 394 aa16.35■□□□□ 0.21
VARS-226ENST00000483275 THEGQ9P2T0 379 aa16.35■□□□□ 0.21
VARS-226ENST00000483275 RBM47A0AV96 593 aaKnown RBP16.34■□□□□ 0.21
VARS-226ENST00000483275 ATP2A2P16615 1042 aaKnown RBP16.34■□□□□ 0.21
VARS-226ENST00000483275 CPT1AP50416 773 aa16.34■□□□□ 0.21
VARS-226ENST00000483275 AKNAD1Q5T1N1 836 aa16.34■□□□□ 0.21
VARS-226ENST00000483275 B4GALNT3Q6L9W6 998 aa16.34■□□□□ 0.21
VARS-226ENST00000483275 TBC1D5Q92609 795 aa16.34■□□□□ 0.21
VARS-226ENST00000483275 SYMPKQ92797 1274 aaKnown RBP16.34■□□□□ 0.21
VARS-226ENST00000483275 MTG1Q9BT17 334 aaPredicted RBP16.34■□□□□ 0.21
VARS-226ENST00000483275 TCP11L1Q9NUJ3 509 aa16.34■□□□□ 0.21
VARS-226ENST00000483275 POLR3EQ9NVU0 708 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms