RNA–Protein interactions for RNA: ENST00000482987.1

EPHB3-203, Transcript of EPH receptor B3, humanhuman

TSL 3

Gene EPHB3, Length 482 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-203ENST00000482987 AP5M1Q9H0R1 490 aa13.53□□□□□ -0.24
EPHB3-203ENST00000482987 Q9Y3F1 56 aa13.53□□□□□ -0.24
EPHB3-203ENST00000482987 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.52□□□□□ -0.25
EPHB3-203ENST00000482987 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.52□□□□□ -0.25
EPHB3-203ENST00000482987 PTPDC1A2A3K4 754 aa13.52□□□□□ -0.25
EPHB3-203ENST00000482987 GRXCR1A8MXD5 290 aa13.52□□□□□ -0.25
EPHB3-203ENST00000482987 B4GALT4O60513 344 aa13.52□□□□□ -0.25
EPHB3-203ENST00000482987 CABYRO75952 493 aa13.52□□□□□ -0.25
EPHB3-203ENST00000482987 PCP11498 1178 aaKnown RBP13.52□□□□□ -0.25
EPHB3-203ENST00000482987 AAMPQ13685 434 aa13.52□□□□□ -0.25
EPHB3-203ENST00000482987 GRIN2CQ14957 1233 aa13.52□□□□□ -0.25
EPHB3-203ENST00000482987 DUSP28Q4G0W2 176 aa13.52□□□□□ -0.25
EPHB3-203ENST00000482987 ZNF365Q70YC5 407 aa13.52□□□□□ -0.25
EPHB3-203ENST00000482987 EXOC6Q8TAG9 804 aa13.52□□□□□ -0.25
EPHB3-203ENST00000482987 YTHDC1Q96MU7 727 aaKnown RBP13.52□□□□□ -0.25
EPHB3-203ENST00000482987 TTC14Q96N46 770 aa13.52□□□□□ -0.25
EPHB3-203ENST00000482987 TRPV6Q9H1D0 765 aa13.52□□□□□ -0.25
EPHB3-203ENST00000482987 CPVLQ9H3G5 476 aa13.52□□□□□ -0.25
EPHB3-203ENST00000482987 RWDD1Q9H446 243 aaPredicted RBP13.52□□□□□ -0.25
EPHB3-203ENST00000482987 LCTP09848 1927 aa13.52□□□□□ -0.25
EPHB3-203ENST00000482987 WDR19Q8NEZ3 1342 aa13.51□□□□□ -0.25
EPHB3-203ENST00000482987 RBM47A0AV96 593 aaKnown RBP13.51□□□□□ -0.25
EPHB3-203ENST00000482987 TLR3O15455 904 aaKnown RBP13.51□□□□□ -0.25
EPHB3-203ENST00000482987 GOLGA8HP0CJ92 632 aa13.51□□□□□ -0.25
EPHB3-203ENST00000482987 EDNRBP24530 442 aa13.51□□□□□ -0.25
EPHB3-203ENST00000482987 CALML3P27482 149 aa13.51□□□□□ -0.25
EPHB3-203ENST00000482987 PBX2P40425 430 aa13.51□□□□□ -0.25
EPHB3-203ENST00000482987 RPS6P62753 249 aaKnown RBP13.51□□□□□ -0.25
EPHB3-203ENST00000482987 CWC27Q6UX04 472 aaKnown RBP13.51□□□□□ -0.25
EPHB3-203ENST00000482987 TMEM199Q8N511 208 aa13.51□□□□□ -0.25
EPHB3-203ENST00000482987 ESR2Q92731 530 aa13.51□□□□□ -0.25
EPHB3-203ENST00000482987 VWCEQ96DN2 955 aa13.51□□□□□ -0.25
EPHB3-203ENST00000482987 NOC4LQ9BVI4 516 aaKnown RBP13.51□□□□□ -0.25
EPHB3-203ENST00000482987 WDR11Q9BZH6 1224 aa13.51□□□□□ -0.25
EPHB3-203ENST00000482987 HIPK3Q9H422 1215 aa13.51□□□□□ -0.25
EPHB3-203ENST00000482987 RNF41Q9H4P4 317 aaPredicted RBP13.51□□□□□ -0.25
EPHB3-203ENST00000482987 ADD3Q9UEY8 706 aaKnown RBP13.51□□□□□ -0.25
EPHB3-203ENST00000482987 TTC28Q96AY4 2481 aa13.51□□□□□ -0.25
EPHB3-203ENST00000482987 CHD9Q3L8U1 2897 aa13.5□□□□□ -0.25
EPHB3-203ENST00000482987 LOC102724159A0A0B4J2E5 919 aa13.5□□□□□ -0.25
EPHB3-203ENST00000482987 ZEB2O60315 1214 aa13.5□□□□□ -0.25
EPHB3-203ENST00000482987 FOSL2P15408 326 aa13.5□□□□□ -0.25
EPHB3-203ENST00000482987 MFAP1P55081 439 aaKnown RBP13.5□□□□□ -0.25
EPHB3-203ENST00000482987 PWP2Q15269 919 aaKnown RBP13.5□□□□□ -0.25
EPHB3-203ENST00000482987 RNF207Q6ZRF8 634 aa13.5□□□□□ -0.25
EPHB3-203ENST00000482987 TIFAQ96CG3 184 aa13.5□□□□□ -0.25
EPHB3-203ENST00000482987 PBX4Q9BYU1 374 aa13.5□□□□□ -0.25
EPHB3-203ENST00000482987 UBA5Q9GZZ9 404 aa13.5□□□□□ -0.25
EPHB3-203ENST00000482987 WNT8AQ9H1J5 351 aa13.5□□□□□ -0.25
EPHB3-203ENST00000482987 IL25Q9H293 177 aa13.5□□□□□ -0.25
EPHB3-203ENST00000482987 ZNF576Q9H609 170 aa13.5□□□□□ -0.25
EPHB3-203ENST00000482987 IL23AQ9NPF7 189 aa13.5□□□□□ -0.25
EPHB3-203ENST00000482987 CXXC1Q9P0U4 656 aaPredicted RBP13.5□□□□□ -0.25
EPHB3-203ENST00000482987 B4E1Z4 1266 aa13.49□□□□□ -0.25
EPHB3-203ENST00000482987 ZNF213O14771 459 aa13.49□□□□□ -0.25
EPHB3-203ENST00000482987 KDM4AO75164 1064 aa13.49□□□□□ -0.25
EPHB3-203ENST00000482987 CCL23P55773 120 aa13.49□□□□□ -0.25
EPHB3-203ENST00000482987 PURAQ00577 322 aaKnown RBP13.49□□□□□ -0.25
EPHB3-203ENST00000482987 USH1GQ495M9 461 aa13.49□□□□□ -0.25
EPHB3-203ENST00000482987 GPATCH4Q5T3I0 446 aaKnown RBP13.49□□□□□ -0.25
EPHB3-203ENST00000482987 PSRC1Q6PGN9 363 aaPredicted RBP13.49□□□□□ -0.25
EPHB3-203ENST00000482987 DGKHQ86XP1 1220 aa13.49□□□□□ -0.25
EPHB3-203ENST00000482987 PNMA1Q8ND90 353 aa13.49□□□□□ -0.25
EPHB3-203ENST00000482987 HERVK_113Q902F9 699 aa13.49□□□□□ -0.25
EPHB3-203ENST00000482987 ALDH8A1Q9H2A2 487 aaPredicted RBP13.49□□□□□ -0.25
EPHB3-203ENST00000482987 ENAHQ8N8S7 591 aaPredicted RBP13.48□□□□□ -0.25
EPHB3-203ENST00000482987 USP38Q8NB14 1042 aa13.48□□□□□ -0.25
EPHB3-203ENST00000482987 DNERQ8NFT8 737 aa13.48□□□□□ -0.25
EPHB3-203ENST00000482987 OR6J1Q8NGC5 347 aa13.48□□□□□ -0.25
EPHB3-203ENST00000482987 PPP1R13LQ8WUF5 828 aa13.48□□□□□ -0.25
EPHB3-203ENST00000482987 TBC1D5Q92609 795 aa13.48□□□□□ -0.25
EPHB3-203ENST00000482987 ANKS1AQ92625 1134 aa13.48□□□□□ -0.25
EPHB3-203ENST00000482987 COPS5Q92905 334 aa13.48□□□□□ -0.25
EPHB3-203ENST00000482987 SEZ6LQ9BYH1 1024 aa13.48□□□□□ -0.25
EPHB3-203ENST00000482987 DIAPH3Q9NSV4 1193 aa13.48□□□□□ -0.25
EPHB3-203ENST00000482987 TRMT13Q9NUP7 481 aaKnown RBP13.48□□□□□ -0.25
EPHB3-203ENST00000482987 ZSWIM5Q9P217 1185 aa13.48□□□□□ -0.25
EPHB3-203ENST00000482987 PNMA2Q9UL42 364 aa13.48□□□□□ -0.25
EPHB3-203ENST00000482987 ARIH2O95376 493 aa13.47□□□□□ -0.25
EPHB3-203ENST00000482987 PDE4DQ08499 809 aa13.47□□□□□ -0.25
EPHB3-203ENST00000482987 CDC37Q16543 378 aaPredicted RBP13.47□□□□□ -0.25
EPHB3-203ENST00000482987 OTOP2Q7RTS6 562 aa13.47□□□□□ -0.25
EPHB3-203ENST00000482987 IQCA1Q86XH1 822 aa13.47□□□□□ -0.25
EPHB3-203ENST00000482987 ADGRF4Q8IZF3 695 aa13.47□□□□□ -0.25
EPHB3-203ENST00000482987 SCLYQ96I15 445 aa13.47□□□□□ -0.25
EPHB3-203ENST00000482987 ZSCAN10Q96SZ4 725 aaPredicted RBP13.47□□□□□ -0.25
EPHB3-203ENST00000482987 DSCC1Q9BVC3 393 aa13.47□□□□□ -0.25
EPHB3-203ENST00000482987 COL20A1Q9P218 1284 aa13.47□□□□□ -0.25
EPHB3-203ENST00000482987 CHD7Q9P2D1 2997 aa13.47□□□□□ -0.25
EPHB3-203ENST00000482987 TNKSO95271 1327 aa13.46□□□□□ -0.25
EPHB3-203ENST00000482987 A6NJR5 290 aa13.46□□□□□ -0.25
EPHB3-203ENST00000482987 FGBP02675 491 aa13.46□□□□□ -0.25
EPHB3-203ENST00000482987 MYL3P08590 195 aa13.46□□□□□ -0.25
EPHB3-203ENST00000482987 CYP2C9P11712 490 aa13.46□□□□□ -0.25
EPHB3-203ENST00000482987 CPT1AP50416 773 aa13.46□□□□□ -0.25
EPHB3-203ENST00000482987 PPP2R5BQ15173 497 aa13.46□□□□□ -0.25
EPHB3-203ENST00000482987 RGS22Q8NE09 1264 aa13.46□□□□□ -0.25
EPHB3-203ENST00000482987 SCFD2Q8WU76 684 aa13.46□□□□□ -0.25
EPHB3-203ENST00000482987 KAT14Q9H8E8 782 aa13.46□□□□□ -0.25
EPHB3-203ENST00000482987 POLR3EQ9NVU0 708 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms