RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 FGD1P98174 961 aa8.66□□□□□ -1.02
CLK1-212ENST00000482590 MPZL3Q6UWV2 235 aa8.66□□□□□ -1.02
CLK1-212ENST00000482590 PTF1AQ7RTS3 328 aa8.66□□□□□ -1.02
CLK1-212ENST00000482590 C1QL4Q86Z23 238 aa8.66□□□□□ -1.02
CLK1-212ENST00000482590 RIN3Q8TB24 985 aa8.66□□□□□ -1.02
CLK1-212ENST00000482590 ZNF526Q8TF50 670 aaPredicted RBP8.66□□□□□ -1.02
CLK1-212ENST00000482590 TOX2Q96NM4 488 aa8.66□□□□□ -1.02
CLK1-212ENST00000482590 WNT10AQ9GZT5 417 aa8.66□□□□□ -1.02
CLK1-212ENST00000482590 WWC3Q9ULE0 1092 aa8.66□□□□□ -1.02
CLK1-212ENST00000482590 CAPN6Q9Y6Q1 641 aa8.66□□□□□ -1.02
CLK1-212ENST00000482590 KRTAP9-7A8MTY7 169 aa8.65□□□□□ -1.02
CLK1-212ENST00000482590 H3BS24 57 aa8.65□□□□□ -1.02
CLK1-212ENST00000482590 ZBTB7AO95365 584 aa8.65□□□□□ -1.02
CLK1-212ENST00000482590 CAP2P40123 477 aa8.65□□□□□ -1.02
CLK1-212ENST00000482590 SLC15A2Q16348 729 aa8.65□□□□□ -1.02
CLK1-212ENST00000482590 TMEM67Q5HYA8 995 aa8.65□□□□□ -1.02
CLK1-212ENST00000482590 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.65□□□□□ -1.02
CLK1-212ENST00000482590 SYDE1Q6ZW31 735 aaPredicted RBP8.65□□□□□ -1.02
CLK1-212ENST00000482590 HDXQ7Z353 690 aa8.65□□□□□ -1.02
CLK1-212ENST00000482590 FBXO33Q7Z6M2 555 aa8.65□□□□□ -1.02
CLK1-212ENST00000482590 GAL3ST3Q96A11 431 aa8.65□□□□□ -1.02
CLK1-212ENST00000482590 PPP1R16BQ96T49 567 aa8.65□□□□□ -1.02
CLK1-212ENST00000482590 SLC12A5Q9H2X9 1139 aa8.65□□□□□ -1.02
CLK1-212ENST00000482590 TMA7Q9Y2S6 64 aaKnown RBP8.65□□□□□ -1.02
CLK1-212ENST00000482590 SUGT1Q9Y2Z0 365 aa8.65□□□□□ -1.02
CLK1-212ENST00000482590 SMG6Q86US8 1419 aaKnown RBP8.64□□□□□ -1.03
CLK1-212ENST00000482590 RTL1A6NKG5 1358 aa8.64□□□□□ -1.03
CLK1-212ENST00000482590 PKD1L3Q7Z443 1732 aa8.64□□□□□ -1.03
CLK1-212ENST00000482590 RAB11FIP3O75154 756 aa8.64□□□□□ -1.03
CLK1-212ENST00000482590 KRT1P04264 644 aa8.64□□□□□ -1.03
CLK1-212ENST00000482590 ERCC5P28715 1186 aaPredicted RBP8.64□□□□□ -1.03
CLK1-212ENST00000482590 CDK8P49336 464 aa8.64□□□□□ -1.03
CLK1-212ENST00000482590 ALG1LQ6GMV1 187 aa8.64□□□□□ -1.03
CLK1-212ENST00000482590 MFSD2AQ8NA29 543 aa8.64□□□□□ -1.03
CLK1-212ENST00000482590 COG3Q96JB2 828 aa8.64□□□□□ -1.03
CLK1-212ENST00000482590 KRTAP4-2Q9BYR5 136 aa8.64□□□□□ -1.03
CLK1-212ENST00000482590 MYH16Q9H6N6 1097 aa8.64□□□□□ -1.03
CLK1-212ENST00000482590 TOGARAM1Q9Y4F4 1720 aa8.63□□□□□ -1.03
CLK1-212ENST00000482590 ANKRD36BQ8N2N9 1353 aa8.63□□□□□ -1.03
CLK1-212ENST00000482590 LETMD1Q6P1Q0 360 aa8.63□□□□□ -1.03
CLK1-212ENST00000482590 LCNL1Q6ZST4 164 aa8.63□□□□□ -1.03
CLK1-212ENST00000482590 LTV1Q96GA3 475 aaPredicted RBP8.63□□□□□ -1.03
CLK1-212ENST00000482590 MTFR1LQ9H019 292 aa8.63□□□□□ -1.03
CLK1-212ENST00000482590 C12orf49Q9H741 205 aa8.63□□□□□ -1.03
CLK1-212ENST00000482590 UTRNP46939 3433 aa8.62□□□□□ -1.03
CLK1-212ENST00000482590 TLDC2A0PJX2 215 aa8.62□□□□□ -1.03
CLK1-212ENST00000482590 USP17L7P0C7H9 530 aa8.62□□□□□ -1.03
CLK1-212ENST00000482590 ETF1P62495 437 aaKnown RBP8.62□□□□□ -1.03
CLK1-212ENST00000482590 LRRC56Q8IYG6 542 aaPredicted RBP8.62□□□□□ -1.03
CLK1-212ENST00000482590 PDGFDQ9GZP0 370 aaPredicted RBP8.62□□□□□ -1.03
CLK1-212ENST00000482590 METTL14Q9HCE5 456 aaKnown RBP8.62□□□□□ -1.03
CLK1-212ENST00000482590 SNCAIPQ9Y6H5 919 aa8.62□□□□□ -1.03
CLK1-212ENST00000482590 MEGF6O75095 1541 aa8.62□□□□□ -1.03
CLK1-212ENST00000482590 ST20-MTHFSA0A0A6YYL1 179 aa8.61□□□□□ -1.03
CLK1-212ENST00000482590 TPD52L2O43399 206 aaKnown RBP8.61□□□□□ -1.03
CLK1-212ENST00000482590 CBX7O95931 251 aa8.61□□□□□ -1.03
CLK1-212ENST00000482590 C1QTNF9P0C862 333 aa8.61□□□□□ -1.03
CLK1-212ENST00000482590 AMPHP49418 695 aa8.61□□□□□ -1.03
CLK1-212ENST00000482590 WIPI1Q5MNZ9 446 aaPredicted RBP8.61□□□□□ -1.03
CLK1-212ENST00000482590 PRAMEF13Q5VWM6 474 aa8.61□□□□□ -1.03
CLK1-212ENST00000482590 THAP5Q7Z6K1 395 aa8.61□□□□□ -1.03
CLK1-212ENST00000482590 HID1Q8IV36 788 aa8.61□□□□□ -1.03
CLK1-212ENST00000482590 EXOC8Q8IYI6 725 aa8.61□□□□□ -1.03
CLK1-212ENST00000482590 IP6K1Q92551 441 aa8.61□□□□□ -1.03
CLK1-212ENST00000482590 UBE2FQ969M7 185 aa8.61□□□□□ -1.03
CLK1-212ENST00000482590 SYTL4Q96C24 671 aaPredicted RBP8.61□□□□□ -1.03
CLK1-212ENST00000482590 LNPKQ9C0E8 428 aa8.61□□□□□ -1.03
CLK1-212ENST00000482590 FAM8A1Q9UBU6 413 aa8.61□□□□□ -1.03
CLK1-212ENST00000482590 SPG7Q9UQ90 795 aa8.61□□□□□ -1.03
CLK1-212ENST00000482590 USP47Q96K76 1375 aa8.61□□□□□ -1.03
CLK1-212ENST00000482590 MAP3K19Q56UN5 1328 aa8.6□□□□□ -1.03
CLK1-212ENST00000482590 UBR3Q6ZT12 1888 aa8.6□□□□□ -1.03
CLK1-212ENST00000482590 VIRMAQ69YN4 1812 aaKnown RBP8.6□□□□□ -1.03
CLK1-212ENST00000482590 CST3P01034 146 aaPredicted RBP8.6□□□□□ -1.03
CLK1-212ENST00000482590 HOXC9P31274 260 aa8.6□□□□□ -1.03
CLK1-212ENST00000482590 CCDC181Q5TID7 509 aa8.6□□□□□ -1.03
CLK1-212ENST00000482590 SV2BQ7L1I2 683 aa8.6□□□□□ -1.03
CLK1-212ENST00000482590 ZSCAN29Q8IWY8 852 aaPredicted RBP8.6□□□□□ -1.03
CLK1-212ENST00000482590 ZSCAN18Q8TBC5 510 aaPredicted RBP8.6□□□□□ -1.03
CLK1-212ENST00000482590 ALPK1Q96QP1 1244 aa8.6□□□□□ -1.03
CLK1-212ENST00000482590 TESK2Q96S53 571 aa8.6□□□□□ -1.03
CLK1-212ENST00000482590 DIRC2Q96SL1 478 aa8.6□□□□□ -1.03
CLK1-212ENST00000482590 GRK4P32298 578 aa8.59□□□□□ -1.03
CLK1-212ENST00000482590 TMF1P82094 1093 aa8.59□□□□□ -1.03
CLK1-212ENST00000482590 TAGLNQ01995 201 aaKnown RBP8.59□□□□□ -1.03
CLK1-212ENST00000482590 ZNF827Q17R98 1081 aa8.59□□□□□ -1.03
CLK1-212ENST00000482590 TSNAXIP1Q2TAA8 658 aa8.59□□□□□ -1.03
CLK1-212ENST00000482590 TTBK2Q6IQ55 1244 aa8.59□□□□□ -1.03
CLK1-212ENST00000482590 ZNF746Q6NUN9 644 aaPredicted RBP8.59□□□□□ -1.03
CLK1-212ENST00000482590 FBXO15Q8NCQ5 510 aaPredicted RBP8.59□□□□□ -1.03
CLK1-212ENST00000482590 XAGE3Q8WTP9 111 aa8.59□□□□□ -1.03
CLK1-212ENST00000482590 ASB16Q96NS5 453 aa8.59□□□□□ -1.03
CLK1-212ENST00000482590 BCL11AQ9H165 835 aa8.59□□□□□ -1.03
CLK1-212ENST00000482590 NSUN3Q9H649 340 aaKnown RBP8.59□□□□□ -1.03
CLK1-212ENST00000482590 ZSWIM5Q9P217 1185 aa8.59□□□□□ -1.03
CLK1-212ENST00000482590 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.59□□□□□ -1.03
CLK1-212ENST00000482590 C4BP0C0L5 1744 aa8.59□□□□□ -1.03
CLK1-212ENST00000482590 MAP3K5Q99683 1374 aa8.59□□□□□ -1.03
CLK1-212ENST00000482590 POLD1P28340 1107 aa8.58□□□□□ -1.04
CLK1-212ENST00000482590 ATP2B2Q01814 1243 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms