RNA–Protein interactions for RNA: ENST00000482420.1

TMEM139-208, Transcript of transmembrane protein 139, humanhuman

TSL 1 (best)

Gene TMEM139, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-208ENST00000482420 RILPL2Q969X0 211 aa22.41■■□□□ 1.18
TMEM139-208ENST00000482420 IL23AQ9NPF7 189 aa22.41■■□□□ 1.18
TMEM139-208ENST00000482420 CXXC1Q9P0U4 656 aaPredicted RBP22.41■■□□□ 1.18
TMEM139-208ENST00000482420 ADD3Q9UEY8 706 aaKnown RBP22.41■■□□□ 1.18
TMEM139-208ENST00000482420 Q9Y3F1 56 aa22.41■■□□□ 1.18
TMEM139-208ENST00000482420 CCDC171Q6TFL3 1326 aa22.4■■□□□ 1.18
TMEM139-208ENST00000482420 DUSP28Q4G0W2 176 aa22.4■■□□□ 1.18
TMEM139-208ENST00000482420 OTOP2Q7RTS6 562 aa22.4■■□□□ 1.18
TMEM139-208ENST00000482420 TBC1D10CQ8IV04 446 aa22.4■■□□□ 1.18
TMEM139-208ENST00000482420 MORC4Q8TE76 937 aa22.4■■□□□ 1.18
TMEM139-208ENST00000482420 WDR11Q9BZH6 1224 aa22.4■■□□□ 1.18
TMEM139-208ENST00000482420 TCP11L1Q9NUJ3 509 aa22.4■■□□□ 1.18
TMEM139-208ENST00000482420 AKNAD1Q5T1N1 836 aa22.39■■□□□ 1.17
TMEM139-208ENST00000482420 MFSD6Q6ZSS7 791 aa22.39■■□□□ 1.17
TMEM139-208ENST00000482420 NOC4LQ9BVI4 516 aaKnown RBP22.39■■□□□ 1.17
TMEM139-208ENST00000482420 ZMYM6O95789 1325 aa22.38■■□□□ 1.17
TMEM139-208ENST00000482420 FGBP02675 491 aa22.38■■□□□ 1.17
TMEM139-208ENST00000482420 B4GALNT3Q6L9W6 998 aa22.38■■□□□ 1.17
TMEM139-208ENST00000482420 RNF207Q6ZRF8 634 aa22.38■■□□□ 1.17
TMEM139-208ENST00000482420 CLEC4DQ8WXI8 215 aa22.38■■□□□ 1.17
TMEM139-208ENST00000482420 PPM1EQ8WY54 764 aa22.38■■□□□ 1.17
TMEM139-208ENST00000482420 HERVK_113Q902F9 699 aa22.38■■□□□ 1.17
TMEM139-208ENST00000482420 ZKSCAN3Q9BRR0 538 aa22.38■■□□□ 1.17
TMEM139-208ENST00000482420 WNT8AQ9H1J5 351 aa22.38■■□□□ 1.17
TMEM139-208ENST00000482420 PRDM12Q9H4Q4 367 aa22.38■■□□□ 1.17
TMEM139-208ENST00000482420 NEDD4P46934 1319 aa22.37■■□□□ 1.17
TMEM139-208ENST00000482420 MYL3P08590 195 aa22.37■■□□□ 1.17
TMEM139-208ENST00000482420 ZNF543Q08ER8 600 aa22.37■■□□□ 1.17
TMEM139-208ENST00000482420 OR6J1Q8NGC5 347 aa22.37■■□□□ 1.17
TMEM139-208ENST00000482420 SCLYQ96I15 445 aa22.37■■□□□ 1.17
TMEM139-208ENST00000482420 GAS2L1Q99501 681 aaPredicted RBP22.37■■□□□ 1.17
TMEM139-208ENST00000482420 ALDH8A1Q9H2A2 487 aaPredicted RBP22.37■■□□□ 1.17
TMEM139-208ENST00000482420 MTIF3Q9H2K0 278 aaKnown RBP22.37■■□□□ 1.17
TMEM139-208ENST00000482420 TRMT13Q9NUP7 481 aaKnown RBP22.37■■□□□ 1.17
TMEM139-208ENST00000482420 GOLGA8HP0CJ92 632 aa22.36■■□□□ 1.17
TMEM139-208ENST00000482420 RPS6P62753 249 aaKnown RBP22.36■■□□□ 1.17
TMEM139-208ENST00000482420 PDE4DQ08499 809 aa22.36■■□□□ 1.17
TMEM139-208ENST00000482420 USH1GQ495M9 461 aa22.36■■□□□ 1.17
TMEM139-208ENST00000482420 PPP1R13LQ8WUF5 828 aa22.36■■□□□ 1.17
TMEM139-208ENST00000482420 CPVLQ9H3G5 476 aa22.36■■□□□ 1.17
TMEM139-208ENST00000482420 MSRAQ9UJ68 235 aa22.36■■□□□ 1.17
TMEM139-208ENST00000482420 CYP2C9P11712 490 aa22.35■■□□□ 1.17
TMEM139-208ENST00000482420 CPT1AP50416 773 aa22.35■■□□□ 1.17
TMEM139-208ENST00000482420 PURAQ00577 322 aaKnown RBP22.35■■□□□ 1.17
TMEM139-208ENST00000482420 RAB30Q15771 203 aa22.35■■□□□ 1.17
TMEM139-208ENST00000482420 TTC14Q96N46 770 aa22.35■■□□□ 1.17
TMEM139-208ENST00000482420 SEZ6LQ9BYH1 1024 aa22.35■■□□□ 1.17
TMEM139-208ENST00000482420 NKX2-4Q9H2Z4 354 aa22.35■■□□□ 1.17
TMEM139-208ENST00000482420 PRDM6Q9NQX0 595 aa22.35■■□□□ 1.17
TMEM139-208ENST00000482420 POLR3EQ9NVU0 708 aa22.35■■□□□ 1.17
TMEM139-208ENST00000482420 SDSP20132 328 aa22.34■■□□□ 1.17
TMEM139-208ENST00000482420 RABGGTBP53611 331 aa22.34■■□□□ 1.17
TMEM139-208ENST00000482420 PPP2R5BQ15173 497 aa22.34■■□□□ 1.17
TMEM139-208ENST00000482420 FAM47CQ5HY64 1035 aa22.34■■□□□ 1.17
TMEM139-208ENST00000482420 ESR2Q92731 530 aa22.34■■□□□ 1.17
TMEM139-208ENST00000482420 RNF41Q9H4P4 317 aaPredicted RBP22.34■■□□□ 1.17
TMEM139-208ENST00000482420 GPHNQ9NQX3 736 aaPredicted RBP22.34■■□□□ 1.17
TMEM139-208ENST00000482420 YBX2Q9Y2T7 364 aaKnown RBP22.34■■□□□ 1.17
TMEM139-208ENST00000482420 SPTBN5Q9NRC6 3674 aaKnown RBP22.34■■□□□ 1.17
TMEM139-208ENST00000482420 TNKSO95271 1327 aa22.33■■□□□ 1.17
TMEM139-208ENST00000482420 GBF1Q92538 1859 aa22.33■■□□□ 1.17
TMEM139-208ENST00000482420 LOC102724159A0A0B4J2E5 919 aa22.33■■□□□ 1.17
TMEM139-208ENST00000482420 ZBBXA8MT70 800 aa22.33■■□□□ 1.17
TMEM139-208ENST00000482420 SNHG28P0DPA3 235 aa22.33■■□□□ 1.17
TMEM139-208ENST00000482420 PCP11498 1178 aaKnown RBP22.33■■□□□ 1.17
TMEM139-208ENST00000482420 PWP2Q15269 919 aaKnown RBP22.33■■□□□ 1.17
TMEM139-208ENST00000482420 COPS5Q92905 334 aa22.33■■□□□ 1.17
TMEM139-208ENST00000482420 MPHOSPH6Q99547 160 aaKnown RBP22.33■■□□□ 1.17
TMEM139-208ENST00000482420 UBA5Q9GZZ9 404 aa22.33■■□□□ 1.17
TMEM139-208ENST00000482420 PNMA2Q9UL42 364 aa22.33■■□□□ 1.17
TMEM139-208ENST00000482420 WDR19Q8NEZ3 1342 aa22.32■■□□□ 1.16
TMEM139-208ENST00000482420 RBM47A0AV96 593 aaKnown RBP22.32■■□□□ 1.16
TMEM139-208ENST00000482420 ZNF213O14771 459 aa22.32■■□□□ 1.16
TMEM139-208ENST00000482420 IGFBP4P22692 258 aa22.32■■□□□ 1.16
TMEM139-208ENST00000482420 MFAP1P55081 439 aaKnown RBP22.32■■□□□ 1.16
TMEM139-208ENST00000482420 CWC27Q6UX04 472 aaKnown RBP22.32■■□□□ 1.16
TMEM139-208ENST00000482420 TICAM2Q86XR7 235 aa22.32■■□□□ 1.16
TMEM139-208ENST00000482420 MTG1Q9BT17 334 aaPredicted RBP22.32■■□□□ 1.16
TMEM139-208ENST00000482420 SLC28A3Q9HAS3 691 aa22.32■■□□□ 1.16
TMEM139-208ENST00000482420 RAD50Q92878 1312 aa22.31■■□□□ 1.16
TMEM139-208ENST00000482420 KDM4AO75164 1064 aa22.31■■□□□ 1.16
TMEM139-208ENST00000482420 MYOGP15173 224 aa22.31■■□□□ 1.16
TMEM139-208ENST00000482420 CHMP4BP1P59074 171 aa22.31■■□□□ 1.16
TMEM139-208ENST00000482420 ADGRE1Q14246 886 aa22.31■■□□□ 1.16
TMEM139-208ENST00000482420 CCDC85BQ15834 202 aaPredicted RBP22.31■■□□□ 1.16
TMEM139-208ENST00000482420 BRDTQ58F21 947 aaPredicted RBP22.31■■□□□ 1.16
TMEM139-208ENST00000482420 GPATCH4Q5T3I0 446 aaKnown RBP22.31■■□□□ 1.16
TMEM139-208ENST00000482420 DEFB128Q7Z7B8 93 aa22.31■■□□□ 1.16
TMEM139-208ENST00000482420 RPUSD2Q8IZ73 545 aaKnown RBP22.31■■□□□ 1.16
TMEM139-208ENST00000482420 DNERQ8NFT8 737 aa22.31■■□□□ 1.16
TMEM139-208ENST00000482420 SCFD2Q8WU76 684 aa22.31■■□□□ 1.16
TMEM139-208ENST00000482420 SLC4A7Q9Y6M7 1214 aa22.31■■□□□ 1.16
TMEM139-208ENST00000482420 SUPT20HL2P0C7V6 817 aa22.3■■□□□ 1.16
TMEM139-208ENST00000482420 TXNP10599 105 aaKnown RBP22.3■■□□□ 1.16
TMEM139-208ENST00000482420 EDNRBP24530 442 aa22.3■■□□□ 1.16
TMEM139-208ENST00000482420 CDC37Q16543 378 aaPredicted RBP22.3■■□□□ 1.16
TMEM139-208ENST00000482420 NBPF20Q3BBV1 942 aa22.3■■□□□ 1.16
TMEM139-208ENST00000482420 CHD1LQ86WJ1 897 aa22.3■■□□□ 1.16
TMEM139-208ENST00000482420 SMC5Q8IY18 1101 aa22.3■■□□□ 1.16
TMEM139-208ENST00000482420 PNMA1Q8ND90 353 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms