RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 ADCY5O95622 1261 aa13.22□□□□□ -0.29
GGPS1-205ENST00000482013 CYP3A4P08684 503 aa13.22□□□□□ -0.29
GGPS1-205ENST00000482013 CIITAP33076 1130 aa13.22□□□□□ -0.29
GGPS1-205ENST00000482013 HIRAP54198 1017 aaPredicted RBP13.22□□□□□ -0.29
GGPS1-205ENST00000482013 MORC3Q14149 939 aa13.22□□□□□ -0.29
GGPS1-205ENST00000482013 DPCR1Q3MIW9 517 aa13.22□□□□□ -0.29
GGPS1-205ENST00000482013 DPY19L2Q6NUT2 758 aa13.22□□□□□ -0.29
GGPS1-205ENST00000482013 PDXDC2PQ6P474 469 aa13.22□□□□□ -0.29
GGPS1-205ENST00000482013 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.22□□□□□ -0.29
GGPS1-205ENST00000482013 CRYGNQ8WXF5 182 aa13.22□□□□□ -0.29
GGPS1-205ENST00000482013 KLRG1Q96E93 195 aa13.22□□□□□ -0.29
GGPS1-205ENST00000482013 L3MBTL3Q96JM7 780 aaPredicted RBP13.22□□□□□ -0.29
GGPS1-205ENST00000482013 GTPBP4Q9BZE4 634 aaKnown RBP13.22□□□□□ -0.29
GGPS1-205ENST00000482013 PICK1Q9NRD5 415 aa13.22□□□□□ -0.29
GGPS1-205ENST00000482013 MAP3K20Q9NYL2 800 aaKnown RBP13.22□□□□□ -0.29
GGPS1-205ENST00000482013 STK24Q9Y6E0 443 aa13.22□□□□□ -0.29
GGPS1-205ENST00000482013 PHIPQ8WWQ0 1821 aa13.21□□□□□ -0.29
GGPS1-205ENST00000482013 SPDYE3A6NKU9 549 aa13.21□□□□□ -0.29
GGPS1-205ENST00000482013 USP17L15C9J2P7 530 aa13.21□□□□□ -0.29
GGPS1-205ENST00000482013 USP17L13C9JLJ4 530 aa13.21□□□□□ -0.29
GGPS1-205ENST00000482013 USP17L11C9JVI0 530 aa13.21□□□□□ -0.29
GGPS1-205ENST00000482013 USP17L18D6R9N7 530 aa13.21□□□□□ -0.29
GGPS1-205ENST00000482013 USP17L22D6RA61 530 aa13.21□□□□□ -0.29
GGPS1-205ENST00000482013 USP17L17D6RBQ6 530 aa13.21□□□□□ -0.29
GGPS1-205ENST00000482013 USP17L19D6RCP7 530 aa13.21□□□□□ -0.29
GGPS1-205ENST00000482013 USP17L20D6RJB6 530 aa13.21□□□□□ -0.29
GGPS1-205ENST00000482013 DDNO94850 711 aaPredicted RBP13.21□□□□□ -0.29
GGPS1-205ENST00000482013 ICAM1P05362 532 aa13.21□□□□□ -0.29
GGPS1-205ENST00000482013 YBX3P16989 372 aaKnown RBP eCLIP13.21□□□□□ -0.29
GGPS1-205ENST00000482013 PTPRAP18433 802 aa13.21□□□□□ -0.29
GGPS1-205ENST00000482013 INPP5BP32019 993 aa13.21□□□□□ -0.29
GGPS1-205ENST00000482013 SREBF1P36956 1147 aa13.21□□□□□ -0.29
GGPS1-205ENST00000482013 USP17L24Q0WX57 530 aa13.21□□□□□ -0.29
GGPS1-205ENST00000482013 DPYDQ12882 1025 aa13.21□□□□□ -0.29
GGPS1-205ENST00000482013 C9orf131Q5VYM1 1079 aa13.21□□□□□ -0.29
GGPS1-205ENST00000482013 RRAGBQ5VZM2 374 aa13.21□□□□□ -0.29
GGPS1-205ENST00000482013 USP17L6PQ6QN14 398 aa13.21□□□□□ -0.29
GGPS1-205ENST00000482013 CABP7Q86V35 215 aa13.21□□□□□ -0.29
GGPS1-205ENST00000482013 DHX40Q8IX18 779 aaKnown RBP13.21□□□□□ -0.29
GGPS1-205ENST00000482013 SLFN12Q8IYM2 578 aa13.21□□□□□ -0.29
GGPS1-205ENST00000482013 ERCC4Q92889 916 aaPredicted RBP13.21□□□□□ -0.29
GGPS1-205ENST00000482013 KIFC2Q96AC6 838 aa13.21□□□□□ -0.29
GGPS1-205ENST00000482013 DCPSQ96C86 337 aaKnown RBP13.21□□□□□ -0.29
GGPS1-205ENST00000482013 C12orf42Q96LP6 360 aa13.21□□□□□ -0.29
GGPS1-205ENST00000482013 SLF1Q9BQI6 1058 aa13.21□□□□□ -0.29
GGPS1-205ENST00000482013 GLIS2Q9BZE0 524 aaPredicted RBP13.21□□□□□ -0.29
GGPS1-205ENST00000482013 MAF1Q9H063 256 aa13.21□□□□□ -0.29
GGPS1-205ENST00000482013 DDX25Q9UHL0 483 aaKnown RBP13.21□□□□□ -0.29
GGPS1-205ENST00000482013 MAN1B1Q9UKM7 699 aa13.21□□□□□ -0.29
GGPS1-205ENST00000482013 RABGAP1Q9Y3P9 1069 aa13.21□□□□□ -0.29
GGPS1-205ENST00000482013 GCOM1H8Y6P7 765 aaPredicted RBP13.2□□□□□ -0.3
GGPS1-205ENST00000482013 BIN1O00499 593 aa13.2□□□□□ -0.3
GGPS1-205ENST00000482013 FOXN1O15353 648 aa13.2□□□□□ -0.3
GGPS1-205ENST00000482013 TPM3P06753 285 aa13.2□□□□□ -0.3
GGPS1-205ENST00000482013 POLR2MP0CAP2 368 aa13.2□□□□□ -0.3
GGPS1-205ENST00000482013 CDC25BP30305 580 aa13.2□□□□□ -0.3
GGPS1-205ENST00000482013 HOXA7P31268 230 aaPredicted RBP13.2□□□□□ -0.3
GGPS1-205ENST00000482013 STAT6P42226 847 aa13.2□□□□□ -0.3
GGPS1-205ENST00000482013 BACE1P56817 501 aa13.2□□□□□ -0.3
GGPS1-205ENST00000482013 ARHGAP4P98171 946 aa13.2□□□□□ -0.3
GGPS1-205ENST00000482013 GHRHRQ02643 423 aa13.2□□□□□ -0.3
GGPS1-205ENST00000482013 ZYXQ15942 572 aaKnown RBP13.2□□□□□ -0.3
GGPS1-205ENST00000482013 USH1GQ495M9 461 aa13.2□□□□□ -0.3
GGPS1-205ENST00000482013 Q4G0T1 1027 aa13.2□□□□□ -0.3
GGPS1-205ENST00000482013 USP50Q70EL3 339 aaPredicted RBP13.2□□□□□ -0.3
GGPS1-205ENST00000482013 POTEDQ86YR6 584 aa13.2□□□□□ -0.3
GGPS1-205ENST00000482013 MCF2L2Q86YR7 1114 aa13.2□□□□□ -0.3
GGPS1-205ENST00000482013 ZNF280CQ8ND82 737 aa13.2□□□□□ -0.3
GGPS1-205ENST00000482013 ZC3H15Q8WU90 426 aaKnown RBP13.2□□□□□ -0.3
GGPS1-205ENST00000482013 CALML4Q96GE6 196 aa13.2□□□□□ -0.3
GGPS1-205ENST00000482013 WRNIP1Q96S55 665 aa13.2□□□□□ -0.3
GGPS1-205ENST00000482013 RMND1Q9NWS8 449 aa13.2□□□□□ -0.3
GGPS1-205ENST00000482013 STK17AQ9UEE5 414 aa13.2□□□□□ -0.3
GGPS1-205ENST00000482013 PARP14Q460N5 1801 aa13.19□□□□□ -0.3
GGPS1-205ENST00000482013 GOLGA6L6A8MZA4 724 aa13.19□□□□□ -0.3
GGPS1-205ENST00000482013 OPLAHO14841 1288 aa13.19□□□□□ -0.3
GGPS1-205ENST00000482013 SLC37A4O43826 429 aa13.19□□□□□ -0.3
GGPS1-205ENST00000482013 TDP2O95551 362 aa13.19□□□□□ -0.3
GGPS1-205ENST00000482013 PRR29P0C7W0 189 aa13.19□□□□□ -0.3
GGPS1-205ENST00000482013 ERCC5P28715 1186 aaPredicted RBP13.19□□□□□ -0.3
GGPS1-205ENST00000482013 TECP42680 631 aa13.19□□□□□ -0.3
GGPS1-205ENST00000482013 TXKP42681 527 aa13.19□□□□□ -0.3
GGPS1-205ENST00000482013 SNAP25P60880 206 aa13.19□□□□□ -0.3
GGPS1-205ENST00000482013 AMPD3Q01432 767 aa13.19□□□□□ -0.3
GGPS1-205ENST00000482013 LDHDQ86WU2 507 aa13.19□□□□□ -0.3
GGPS1-205ENST00000482013 AOPEPQ8N6M6 819 aa13.19□□□□□ -0.3
GGPS1-205ENST00000482013 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.19□□□□□ -0.3
GGPS1-205ENST00000482013 FAM20AQ96MK3 541 aa13.19□□□□□ -0.3
GGPS1-205ENST00000482013 LRRC27Q9C0I9 530 aa13.19□□□□□ -0.3
GGPS1-205ENST00000482013 KCNMB3Q9NPA1 279 aa13.19□□□□□ -0.3
GGPS1-205ENST00000482013 EMILIN3Q9NT22 766 aa13.19□□□□□ -0.3
GGPS1-205ENST00000482013 KBTBD4Q9NVX7 518 aa13.19□□□□□ -0.3
GGPS1-205ENST00000482013 LRWD1Q9UFC0 647 aa13.19□□□□□ -0.3
GGPS1-205ENST00000482013 SCAF8Q9UPN6 1271 aaKnown RBP13.19□□□□□ -0.3
GGPS1-205ENST00000482013 SCN4AP35499 1836 aa13.18□□□□□ -0.3
GGPS1-205ENST00000482013 MARCH6O60337 910 aa13.18□□□□□ -0.3
GGPS1-205ENST00000482013 GRIN3BO60391 1043 aa13.18□□□□□ -0.3
GGPS1-205ENST00000482013 ZBED4O75132 1171 aa13.18□□□□□ -0.3
GGPS1-205ENST00000482013 USP2O75604 605 aaPredicted RBP13.18□□□□□ -0.3
GGPS1-205ENST00000482013 AFMP43652 599 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms