RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	MATN3	O15232	486 aa		5.75	□□□□□ -1.49
CCNL1-223	ENST00000481173	CD247	P20963	164 aa		5.75	□□□□□ -1.49
CCNL1-223	ENST00000481173	SARS	P49591	514 aa	Known RBP	5.75	□□□□□ -1.49
CCNL1-223	ENST00000481173	PPP2R5D	Q14738	602 aa		5.75	□□□□□ -1.49
CCNL1-223	ENST00000481173	ZYX	Q15942	572 aa	Known RBP	5.75	□□□□□ -1.49
CCNL1-223	ENST00000481173	ANKRD39	Q53RE8	183 aa		5.75	□□□□□ -1.49
CCNL1-223	ENST00000481173	ZNF761	Q86XN6	746 aa	Predicted RBP	5.75	□□□□□ -1.49
CCNL1-223	ENST00000481173	RGS22	Q8NE09	1264 aa		5.75	□□□□□ -1.49
CCNL1-223	ENST00000481173	SMARCC1	Q92922	1105 aa	Predicted RBP	5.75	□□□□□ -1.49
CCNL1-223	ENST00000481173	ZNRF3	Q9ULT6	936 aa		5.75	□□□□□ -1.49
CCNL1-223	ENST00000481173	SF3B6	Q9Y3B4	125 aa	Known RBP	5.75	□□□□□ -1.49
CCNL1-223	ENST00000481173	RWDD3	Q9Y3V2	267 aa		5.75	□□□□□ -1.49
CCNL1-223	ENST00000481173	POU4F1	Q01851	419 aa		5.74	□□□□□ -1.49
CCNL1-223	ENST00000481173	SMAD4	Q13485	552 aa	Known RBP	5.74	□□□□□ -1.49
CCNL1-223	ENST00000481173	TMCO4	Q5TGY1	634 aa		5.74	□□□□□ -1.49
CCNL1-223	ENST00000481173	KIAA0825	Q8IV33	1275 aa		5.74	□□□□□ -1.49
CCNL1-223	ENST00000481173	NLGN2	Q8NFZ4	835 aa		5.74	□□□□□ -1.49
CCNL1-223	ENST00000481173	ZBTB8A	Q96BR9	441 aa		5.74	□□□□□ -1.49
CCNL1-223	ENST00000481173	LOXL4	Q96JB6	756 aa		5.74	□□□□□ -1.49
CCNL1-223	ENST00000481173	RBM15	Q96T37	977 aa	Known RBP eCLIP	5.74	□□□□□ -1.49	2e-8	■□□□□ 9.1
CCNL1-223	ENST00000481173	SPON2	Q9BUD6	331 aa		5.74	□□□□□ -1.49
CCNL1-223	ENST00000481173	NTM	Q9P121	344 aa		5.74	□□□□□ -1.49
CCNL1-223	ENST00000481173	ZBTB7C	A1YPR0	619 aa		5.73	□□□□□ -1.49
CCNL1-223	ENST00000481173	ITGA4	P13612	1032 aa		5.73	□□□□□ -1.49
CCNL1-223	ENST00000481173	ZNF16	P17020	682 aa	Predicted RBP	5.73	□□□□□ -1.49
CCNL1-223	ENST00000481173	UNC5A	Q6ZN44	842 aa		5.73	□□□□□ -1.49
CCNL1-223	ENST00000481173	RUFY4	Q6ZNE9	571 aa		5.73	□□□□□ -1.49
CCNL1-223	ENST00000481173	CABP7	Q86V35	215 aa		5.73	□□□□□ -1.49
CCNL1-223	ENST00000481173	TMEM87A	Q8NBN3	555 aa		5.73	□□□□□ -1.49
CCNL1-223	ENST00000481173	ADCY4	Q8NFM4	1077 aa		5.73	□□□□□ -1.49
CCNL1-223	ENST00000481173	DDX11	Q96FC9	970 aa		5.73	□□□□□ -1.49
CCNL1-223	ENST00000481173	TSPAN17	Q96FV3	270 aa		5.73	□□□□□ -1.49
CCNL1-223	ENST00000481173	C8orf49	Q96NF6	230 aa		5.73	□□□□□ -1.49
CCNL1-223	ENST00000481173	FERD3L	Q96RJ6	166 aa		5.73	□□□□□ -1.49
CCNL1-223	ENST00000481173	SYT3	Q9BQG1	590 aa		5.73	□□□□□ -1.49
CCNL1-223	ENST00000481173	MCMBP	Q9BTE3	642 aa		5.73	□□□□□ -1.49
CCNL1-223	ENST00000481173	KRTAP3-1	Q9BYR8	98 aa		5.73	□□□□□ -1.49
CCNL1-223	ENST00000481173	STXBP3	O00186	592 aa		5.72	□□□□□ -1.49
CCNL1-223	ENST00000481173	FSHB	P01225	129 aa		5.72	□□□□□ -1.49
CCNL1-223	ENST00000481173	LDLRAD1	Q5T700	205 aa		5.72	□□□□□ -1.49
CCNL1-223	ENST00000481173	FBXW10	Q5XX13	1052 aa		5.72	□□□□□ -1.49
CCNL1-223	ENST00000481173	CPZ	Q66K79	652 aa		5.72	□□□□□ -1.49
CCNL1-223	ENST00000481173	TTLL7	Q6ZT98	887 aa		5.72	□□□□□ -1.49
CCNL1-223	ENST00000481173	LZTR1	Q8N653	840 aa		5.72	□□□□□ -1.49
CCNL1-223	ENST00000481173	SLC16A11	Q8NCK7	471 aa		5.72	□□□□□ -1.49
CCNL1-223	ENST00000481173	ADAMTS17	Q8TE56	1095 aa		5.72	□□□□□ -1.49
CCNL1-223	ENST00000481173	TM9SF2	Q99805	663 aa		5.72	□□□□□ -1.49
CCNL1-223	ENST00000481173	GULP1	Q9UBP9	304 aa		5.72	□□□□□ -1.49
CCNL1-223	ENST00000481173	CBFA2T2	O43439	604 aa		5.71	□□□□□ -1.5
CCNL1-223	ENST00000481173	PPP1R11	O60927	126 aa	Predicted RBP	5.71	□□□□□ -1.5
CCNL1-223	ENST00000481173	ZNF20	P17024	532 aa		5.71	□□□□□ -1.5
CCNL1-223	ENST00000481173	CACNB2	Q08289	660 aa	Predicted RBP	5.71	□□□□□ -1.5
CCNL1-223	ENST00000481173	DPY19L1	Q2PZI1	675 aa		5.71	□□□□□ -1.5
CCNL1-223	ENST00000481173	RCSD1	Q6JBY9	416 aa		5.71	□□□□□ -1.5
CCNL1-223	ENST00000481173	CPNE8	Q86YQ8	564 aa		5.71	□□□□□ -1.5
CCNL1-223	ENST00000481173	TAB3	Q8N5C8	712 aa	Predicted RBP	5.71	□□□□□ -1.5
CCNL1-223	ENST00000481173	CPA5	Q8WXQ8	436 aa		5.71	□□□□□ -1.5
CCNL1-223	ENST00000481173	PEX11G	Q96HA9	241 aa		5.71	□□□□□ -1.5
CCNL1-223	ENST00000481173	SIT1	Q9Y3P8	196 aa		5.71	□□□□□ -1.5
CCNL1-223	ENST00000481173	AURKA	O14965	403 aa		5.7	□□□□□ -1.5
CCNL1-223	ENST00000481173	SUV39H1	O43463	412 aa		5.7	□□□□□ -1.5
CCNL1-223	ENST00000481173	SMARCA5	O60264	1052 aa	Predicted RBP	5.7	□□□□□ -1.5
CCNL1-223	ENST00000481173	VAMP4	O75379	141 aa		5.7	□□□□□ -1.5
CCNL1-223	ENST00000481173	PLAT	P00750	562 aa		5.7	□□□□□ -1.5
CCNL1-223	ENST00000481173	IMPDH2	P12268	514 aa		5.7	□□□□□ -1.5
CCNL1-223	ENST00000481173	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	5.7	□□□□□ -1.5
CCNL1-223	ENST00000481173	EEF1DP3	Q658K8	133 aa		5.7	□□□□□ -1.5
CCNL1-223	ENST00000481173	NETO2	Q8NC67	525 aa		5.7	□□□□□ -1.5
CCNL1-223	ENST00000481173	BACH2	Q9BYV9	841 aa		5.7	□□□□□ -1.5
CCNL1-223	ENST00000481173	NUDT5	Q9UKK9	219 aa		5.7	□□□□□ -1.5
CCNL1-223	ENST00000481173	PPT2	Q9UMR5	302 aa		5.7	□□□□□ -1.5
CCNL1-223	ENST00000481173	DIS3	Q9Y2L1	958 aa	Known RBP	5.7	□□□□□ -1.5
CCNL1-223	ENST00000481173	C8B	P07358	591 aa		5.69	□□□□□ -1.5
CCNL1-223	ENST00000481173	GUCY2C	P25092	1073 aa		5.69	□□□□□ -1.5
CCNL1-223	ENST00000481173	MFAP1	P55081	439 aa	Known RBP	5.69	□□□□□ -1.5
CCNL1-223	ENST00000481173	TRIM26	Q12899	539 aa	Predicted RBP	5.69	□□□□□ -1.5
CCNL1-223	ENST00000481173	SLC9A5	Q14940	896 aa		5.69	□□□□□ -1.5
CCNL1-223	ENST00000481173	TCEAL1	Q15170	157 aa		5.69	□□□□□ -1.5
CCNL1-223	ENST00000481173	RGL3	Q3MIN7	710 aa		5.69	□□□□□ -1.5
CCNL1-223	ENST00000481173	USP33	Q8TEY7	942 aa		5.69	□□□□□ -1.5
CCNL1-223	ENST00000481173	GORASP1	Q9BQQ3	440 aa		5.69	□□□□□ -1.5
CCNL1-223	ENST00000481173	MTA3	Q9BTC8	594 aa		5.69	□□□□□ -1.5
CCNL1-223	ENST00000481173	BCL11A	Q9H165	835 aa		5.69	□□□□□ -1.5
CCNL1-223	ENST00000481173	SRRD	Q9UH36	339 aa		5.69	□□□□□ -1.5
CCNL1-223	ENST00000481173	ZNF214	Q9UL59	606 aa	Predicted RBP	5.69	□□□□□ -1.5
CCNL1-223	ENST00000481173		A0A087WZG4	1122 aa		5.68	□□□□□ -1.5
CCNL1-223	ENST00000481173	CYP2C8	P10632	490 aa		5.68	□□□□□ -1.5
CCNL1-223	ENST00000481173	SEPHS1	P49903	392 aa		5.68	□□□□□ -1.5
CCNL1-223	ENST00000481173	WWC2	Q6AWC2	1192 aa		5.68	□□□□□ -1.5
CCNL1-223	ENST00000481173	SAMD11	Q96NU1	681 aa		5.68	□□□□□ -1.5
CCNL1-223	ENST00000481173	SCAND2P	Q9GZW5	306 aa	Predicted RBP	5.68	□□□□□ -1.5
CCNL1-223	ENST00000481173	ST6GALNAC2	Q9UJ37	374 aa		5.68	□□□□□ -1.5
CCNL1-223	ENST00000481173	INVS	Q9Y283	1065 aa		5.68	□□□□□ -1.5
CCNL1-223	ENST00000481173	LTBP3	Q9NS15	1303 aa		5.68	□□□□□ -1.5
CCNL1-223	ENST00000481173	C1QTNF3-AMACR	E9PGA6	284 aa		5.67	□□□□□ -1.5
CCNL1-223	ENST00000481173	NTRK1	P04629	796 aa		5.67	□□□□□ -1.5
CCNL1-223	ENST00000481173	ZNF76	P36508	570 aa		5.67	□□□□□ -1.5
CCNL1-223	ENST00000481173	STK32C	Q86UX6	486 aa		5.67	□□□□□ -1.5
CCNL1-223	ENST00000481173	LINC00482	Q8N8I6	264 aa		5.67	□□□□□ -1.5
CCNL1-223	ENST00000481173	CHST13	Q8NET6	341 aa		5.67	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms