RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 REPS2Q8NFH8 660 aa16.84■□□□□ 0.29
SNRNP200-205ENST00000480835 AGBL1Q96MI9 1066 aa16.84■□□□□ 0.29
SNRNP200-205ENST00000480835 ANO3Q9BYT9 981 aa16.84■□□□□ 0.29
SNRNP200-205ENST00000480835 AGTPBP1Q9UPW5 1226 aa16.84■□□□□ 0.29
SNRNP200-205ENST00000480835 SPDYE3A6NKU9 549 aa16.83■□□□□ 0.28
SNRNP200-205ENST00000480835 WNT7AO00755 349 aa16.83■□□□□ 0.28
SNRNP200-205ENST00000480835 LETM1O95202 739 aaPredicted RBP16.83■□□□□ 0.28
SNRNP200-205ENST00000480835 LIG1P18858 919 aa16.83■□□□□ 0.28
SNRNP200-205ENST00000480835 PRPHP41219 470 aa16.83■□□□□ 0.28
SNRNP200-205ENST00000480835 FAM160A1Q05DH4 1040 aa16.83■□□□□ 0.28
SNRNP200-205ENST00000480835 FMR1Q06787 632 aaKnown RBP eCLIP16.83■□□□□ 0.283e-10■■□□□ 12.8
SNRNP200-205ENST00000480835 LETM2Q2VYF4 491 aa16.83■□□□□ 0.28
SNRNP200-205ENST00000480835 PPP4R3AQ6IN85 833 aa16.83■□□□□ 0.28
SNRNP200-205ENST00000480835 MOXD1Q6UVY6 613 aa16.83■□□□□ 0.28
SNRNP200-205ENST00000480835 WNK4Q96J92 1243 aa16.83■□□□□ 0.28
SNRNP200-205ENST00000480835 RAVER2Q9HCJ3 691 aaKnown RBP16.83■□□□□ 0.28
SNRNP200-205ENST00000480835 FAM237AA0A1B0GTK4 181 aa16.82■□□□□ 0.28
SNRNP200-205ENST00000480835 SPDYE16A6NNV3 312 aaPredicted RBP16.82■□□□□ 0.28
SNRNP200-205ENST00000480835 NEMFO60524 1076 aa16.82■□□□□ 0.28
SNRNP200-205ENST00000480835 CCNT1O60563 726 aaKnown RBP16.82■□□□□ 0.28
SNRNP200-205ENST00000480835 CFBP00751 764 aa16.82■□□□□ 0.28
SNRNP200-205ENST00000480835 ALAS1P13196 640 aa16.82■□□□□ 0.28
SNRNP200-205ENST00000480835 HSD17B4P51659 736 aa16.82■□□□□ 0.28
SNRNP200-205ENST00000480835 IRX3P78415 501 aaPredicted RBP16.82■□□□□ 0.28
SNRNP200-205ENST00000480835 TPRNQ4KMQ1 711 aa16.82■□□□□ 0.28
SNRNP200-205ENST00000480835 TREML2Q5T2D2 321 aa16.82■□□□□ 0.28
SNRNP200-205ENST00000480835 RESP18Q5W5W9 173 aa16.82■□□□□ 0.28
SNRNP200-205ENST00000480835 LBX2Q6XYB7 198 aa16.82■□□□□ 0.28
SNRNP200-205ENST00000480835 CPXCR1Q8N123 301 aa16.82■□□□□ 0.28
SNRNP200-205ENST00000480835 C4orf32Q8N8J7 132 aa16.82■□□□□ 0.28
SNRNP200-205ENST00000480835 TMEM63CQ9P1W3 806 aa16.82■□□□□ 0.28
SNRNP200-205ENST00000480835 OSBPP22059 807 aa16.81■□□□□ 0.28
SNRNP200-205ENST00000480835 GJA5P36382 358 aa16.81■□□□□ 0.28
SNRNP200-205ENST00000480835 SREBF1P36956 1147 aa16.81■□□□□ 0.28
SNRNP200-205ENST00000480835 GTF2A2P52657 109 aa16.81■□□□□ 0.28
SNRNP200-205ENST00000480835 MOGSQ13724 837 aa16.81■□□□□ 0.28
SNRNP200-205ENST00000480835 CLEC4DQ8WXI8 215 aa16.81■□□□□ 0.28
SNRNP200-205ENST00000480835 TEX13BQ9BXU2 312 aa16.81■□□□□ 0.28
SNRNP200-205ENST00000480835 DACT1Q9NYF0 836 aa16.81■□□□□ 0.28
SNRNP200-205ENST00000480835 FAM13BQ9NYF5 915 aa16.81■□□□□ 0.28
SNRNP200-205ENST00000480835 ZNF214Q9UL59 606 aaPredicted RBP16.81■□□□□ 0.28
SNRNP200-205ENST00000480835 RABGAP1Q9Y3P9 1069 aa16.81■□□□□ 0.28
SNRNP200-205ENST00000480835 CYP3A7-CYP3A51PA0A087WV96 503 aa16.8■□□□□ 0.28
SNRNP200-205ENST00000480835 CYP3A4P08684 503 aa16.8■□□□□ 0.28
SNRNP200-205ENST00000480835 OR52Z1P0C646 297 aa16.8■□□□□ 0.28
SNRNP200-205ENST00000480835 ZBTB48P10074 688 aaPredicted RBP16.8■□□□□ 0.28
SNRNP200-205ENST00000480835 CETPP11597 493 aa16.8■□□□□ 0.28
SNRNP200-205ENST00000480835 TAL1P17542 331 aaPredicted RBP16.8■□□□□ 0.28
SNRNP200-205ENST00000480835 CYP3A7P24462 503 aa16.8■□□□□ 0.28
SNRNP200-205ENST00000480835 ARHGAP4P98171 946 aa16.8■□□□□ 0.28
SNRNP200-205ENST00000480835 SHC4Q6S5L8 630 aa16.8■□□□□ 0.28
SNRNP200-205ENST00000480835 ENGASEQ8NFI3 743 aa16.8■□□□□ 0.28
SNRNP200-205ENST00000480835 GTF3C2Q8WUA4 911 aaPredicted RBP16.8■□□□□ 0.28
SNRNP200-205ENST00000480835 CRYGNQ8WXF5 182 aa16.8■□□□□ 0.28
SNRNP200-205ENST00000480835 CLIC6Q96NY7 704 aa16.8■□□□□ 0.28
SNRNP200-205ENST00000480835 TRERF1Q96PN7 1200 aa16.8■□□□□ 0.28
SNRNP200-205ENST00000480835 GZF1Q9H116 711 aaPredicted RBP16.8■□□□□ 0.28
SNRNP200-205ENST00000480835 ASCC2Q9H1I8 757 aaPredicted RBP16.8■□□□□ 0.28
SNRNP200-205ENST00000480835 GOLPH3LQ9H4A5 285 aa16.8■□□□□ 0.28
SNRNP200-205ENST00000480835 GPBP1L1Q9HC44 474 aaPredicted RBP16.8■□□□□ 0.28
SNRNP200-205ENST00000480835 PNMA3Q9UL41 463 aa16.8■□□□□ 0.28
SNRNP200-205ENST00000480835 SLC45A1Q9Y2W3 748 aa16.8■□□□□ 0.28
SNRNP200-205ENST00000480835 CTAGE5O15320 804 aa16.79■□□□□ 0.28
SNRNP200-205ENST00000480835 KINO60870 393 aaKnown RBP16.79■□□□□ 0.28
SNRNP200-205ENST00000480835 NR1I2O75469 434 aa16.79■□□□□ 0.28
SNRNP200-205ENST00000480835 PFKFB1P16118 471 aa16.79■□□□□ 0.28
SNRNP200-205ENST00000480835 CIITAP33076 1130 aa16.79■□□□□ 0.28
SNRNP200-205ENST00000480835 LONP1P36776 959 aaKnown RBP16.79■□□□□ 0.28
SNRNP200-205ENST00000480835 STAT3P40763 770 aa16.79■□□□□ 0.28
SNRNP200-205ENST00000480835 TMEM132BQ14DG7 1078 aa16.79■□□□□ 0.28
SNRNP200-205ENST00000480835 ZSCAN23Q3MJ62 389 aa16.79■□□□□ 0.28
SNRNP200-205ENST00000480835 CST9Q5W186 159 aa16.79■□□□□ 0.28
SNRNP200-205ENST00000480835 SNRNP48Q6IEG0 339 aaKnown RBP16.79■□□□□ 0.28
SNRNP200-205ENST00000480835 GPAT2Q6NUI2 795 aa16.79■□□□□ 0.28
SNRNP200-205ENST00000480835 DTHD1Q6ZMT9 781 aa16.79■□□□□ 0.28
SNRNP200-205ENST00000480835 FMR1NBQ8N0W7 255 aaPredicted RBP16.79■□□□□ 0.28
SNRNP200-205ENST00000480835 MBOAT7Q96N66 472 aa16.79■□□□□ 0.28
SNRNP200-205ENST00000480835 NUP62CLQ9H1M0 184 aa16.79■□□□□ 0.28
SNRNP200-205ENST00000480835 CLSTN2Q9H4D0 955 aa16.79■□□□□ 0.28
SNRNP200-205ENST00000480835 RNF146Q9NTX7 359 aa16.79■□□□□ 0.28
SNRNP200-205ENST00000480835 HPSEQ9Y251 543 aa16.79■□□□□ 0.28
SNRNP200-205ENST00000480835 A0A1B0GVL5 298 aa16.78■□□□□ 0.28
SNRNP200-205ENST00000480835 NFIBO00712 420 aa16.78■□□□□ 0.28
SNRNP200-205ENST00000480835 EDIL3O43854 480 aa16.78■□□□□ 0.28
SNRNP200-205ENST00000480835 HOXA13P31271 388 aaPredicted RBP16.78■□□□□ 0.28
SNRNP200-205ENST00000480835 COPB2P35606 906 aa16.78■□□□□ 0.28
SNRNP200-205ENST00000480835 SYKP43405 635 aa16.78■□□□□ 0.28
SNRNP200-205ENST00000480835 ZNF445P59923 1031 aa16.78■□□□□ 0.28
SNRNP200-205ENST00000480835 MUM1L1Q5H9M0 696 aa16.78■□□□□ 0.28
SNRNP200-205ENST00000480835 SPRYD7Q5W111 196 aa16.78■□□□□ 0.28
SNRNP200-205ENST00000480835 FCHSD1Q86WN1 690 aa16.78■□□□□ 0.28
SNRNP200-205ENST00000480835 CHST13Q8NET6 341 aa16.78■□□□□ 0.28
SNRNP200-205ENST00000480835 TBC1D5Q92609 795 aa16.78■□□□□ 0.28
SNRNP200-205ENST00000480835 TIGD1Q96MW7 591 aa16.78■□□□□ 0.28
SNRNP200-205ENST00000480835 P2RX7Q99572 595 aaKnown RBP16.78■□□□□ 0.28
SNRNP200-205ENST00000480835 CSRNP2Q9H175 543 aa16.78■□□□□ 0.28
SNRNP200-205ENST00000480835 TMEM60Q9H2L4 133 aa16.78■□□□□ 0.28
SNRNP200-205ENST00000480835 DDX25Q9UHL0 483 aaKnown RBP16.78■□□□□ 0.28
SNRNP200-205ENST00000480835 MRVI1Q9Y6F6 885 aa16.78■□□□□ 0.28
SNRNP200-205ENST00000480835 PASKQ96RG2 1323 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms