RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 CNMDO75829 334 aa20.07■□□□□ 0.8
UPF3A-206ENST00000480362 CYP2C8P10632 490 aa20.07■□□□□ 0.8
UPF3A-206ENST00000480362 TRAPPC10P48553 1259 aa20.07■□□□□ 0.8
UPF3A-206ENST00000480362 NASPP49321 788 aaPredicted RBP20.07■□□□□ 0.8
UPF3A-206ENST00000480362 CSPP1Q1MSJ5 1256 aa20.07■□□□□ 0.8
UPF3A-206ENST00000480362 TKFCQ3LXA3 575 aa20.07■□□□□ 0.8
UPF3A-206ENST00000480362 TTC38Q5R3I4 469 aa20.07■□□□□ 0.8
UPF3A-206ENST00000480362 MCF2L2Q86YR7 1114 aa20.07■□□□□ 0.8
UPF3A-206ENST00000480362 TMEM87AQ8NBN3 555 aa20.07■□□□□ 0.8
UPF3A-206ENST00000480362 TBCKQ8TEA7 893 aa20.07■□□□□ 0.8
UPF3A-206ENST00000480362 PAGR1Q9BTK6 254 aa20.07■□□□□ 0.8
UPF3A-206ENST00000480362 RBPJLQ9UBG7 517 aa20.07■□□□□ 0.8
UPF3A-206ENST00000480362 A0A0G2JMZ2 1700 aa20.06■□□□□ 0.8
UPF3A-206ENST00000480362 DDX11L8A8MPP1 907 aa20.06■□□□□ 0.8
UPF3A-206ENST00000480362 WNT7AO00755 349 aa20.06■□□□□ 0.8
UPF3A-206ENST00000480362 FOSP01100 380 aaPredicted RBP20.06■□□□□ 0.8
UPF3A-206ENST00000480362 AP3B2Q13367 1082 aa20.06■□□□□ 0.8
UPF3A-206ENST00000480362 STK38Q15208 465 aa20.06■□□□□ 0.8
UPF3A-206ENST00000480362 RIOX2Q8IUF8 465 aa20.06■□□□□ 0.8
UPF3A-206ENST00000480362 LINC00301Q8NCQ3 95 aa20.06■□□□□ 0.8
UPF3A-206ENST00000480362 LMBRD1Q9NUN5 540 aa20.06■□□□□ 0.8
UPF3A-206ENST00000480362 RABGAP1Q9Y3P9 1069 aa20.06■□□□□ 0.8
UPF3A-206ENST00000480362 SPDYE3A6NKU9 549 aa20.05■□□□□ 0.8
UPF3A-206ENST00000480362 YEATS4O95619 227 aa20.05■□□□□ 0.8
UPF3A-206ENST00000480362 PTPAQ15257 358 aa20.05■□□□□ 0.8
UPF3A-206ENST00000480362 ZNF174Q15697 407 aa20.05■□□□□ 0.8
UPF3A-206ENST00000480362 PAXIP1Q6ZW49 1069 aaPredicted RBP20.05■□□□□ 0.8
UPF3A-206ENST00000480362 NEK8Q86SG6 692 aa20.05■□□□□ 0.8
UPF3A-206ENST00000480362 FCHSD1Q86WN1 690 aa20.05■□□□□ 0.8
UPF3A-206ENST00000480362 SAMD3Q8N6K7 520 aa20.05■□□□□ 0.8
UPF3A-206ENST00000480362 GTF3C2Q8WUA4 911 aaPredicted RBP20.05■□□□□ 0.8
UPF3A-206ENST00000480362 ANO3Q9BYT9 981 aa20.05■□□□□ 0.8
UPF3A-206ENST00000480362 SPATC1LQ9H0A9 340 aa20.05■□□□□ 0.8
UPF3A-206ENST00000480362 TXNRD2Q9NNW7 524 aa20.05■□□□□ 0.8
UPF3A-206ENST00000480362 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.05■□□□□ 0.8
UPF3A-206ENST00000480362 HSD17B4P51659 736 aa20.04■□□□□ 0.8
UPF3A-206ENST00000480362 INHBEP58166 350 aa20.04■□□□□ 0.8
UPF3A-206ENST00000480362 GHRHRQ02643 423 aa20.04■□□□□ 0.8
UPF3A-206ENST00000480362 SLC39A14Q15043 492 aa20.04■□□□□ 0.8
UPF3A-206ENST00000480362 SMCR8Q8TEV9 937 aaPredicted RBP20.04■□□□□ 0.8
UPF3A-206ENST00000480362 ACAD9Q9H845 621 aa20.04■□□□□ 0.8
UPF3A-206ENST00000480362 MAP3K20Q9NYL2 800 aaKnown RBP20.04■□□□□ 0.8
UPF3A-206ENST00000480362 ELP1O95163 1332 aa20.03■□□□□ 0.8
UPF3A-206ENST00000480362 IGF2BP3O00425 579 aaKnown RBP eCLIP20.03■□□□□ 0.8
UPF3A-206ENST00000480362 SPTLC2O15270 562 aa20.03■□□□□ 0.8
UPF3A-206ENST00000480362 PTMSP20962 102 aa20.03■□□□□ 0.8
UPF3A-206ENST00000480362 APLP1P51693 650 aa20.03■□□□□ 0.8
UPF3A-206ENST00000480362 GRM1Q13255 1194 aa20.03■□□□□ 0.8
UPF3A-206ENST00000480362 LETM2Q2VYF4 491 aa20.03■□□□□ 0.8
UPF3A-206ENST00000480362 Q3C1V9 767 aa20.03■□□□□ 0.8
UPF3A-206ENST00000480362 CYP4F22Q6NT55 531 aa20.03■□□□□ 0.8
UPF3A-206ENST00000480362 NSMFQ6X4W1 530 aa20.03■□□□□ 0.8
UPF3A-206ENST00000480362 CHST13Q8NET6 341 aa20.03■□□□□ 0.8
UPF3A-206ENST00000480362 MOV10L1Q9BXT6 1211 aaKnown RBP20.03■□□□□ 0.8
UPF3A-206ENST00000480362 CREBZFQ9NS37 354 aa20.03■□□□□ 0.8
UPF3A-206ENST00000480362 CEP131Q9UPN4 1083 aa20.03■□□□□ 0.8
UPF3A-206ENST00000480362 EDIL3O43854 480 aa20.02■□□□□ 0.8
UPF3A-206ENST00000480362 GADD45BO75293 160 aaPredicted RBP20.02■□□□□ 0.8
UPF3A-206ENST00000480362 MCM7P33993 719 aa20.02■□□□□ 0.8
UPF3A-206ENST00000480362 GCLCP48506 637 aaPredicted RBP20.02■□□□□ 0.8
UPF3A-206ENST00000480362 DEFB115Q30KQ5 88 aa20.02■□□□□ 0.8
UPF3A-206ENST00000480362 RNF207Q6ZRF8 634 aa20.02■□□□□ 0.8
UPF3A-206ENST00000480362 KCNG4Q8TDN1 519 aa20.02■□□□□ 0.8
UPF3A-206ENST00000480362 PARK7Q99497 189 aaKnown RBP20.02■□□□□ 0.8
UPF3A-206ENST00000480362 CCNT1O60563 726 aaKnown RBP20.01■□□□□ 0.79
UPF3A-206ENST00000480362 SLC25A27O95847 323 aa20.01■□□□□ 0.79
UPF3A-206ENST00000480362 RPS6P62753 249 aaKnown RBP20.01■□□□□ 0.79
UPF3A-206ENST00000480362 ERVK-9P63128 1117 aa20.01■□□□□ 0.79
UPF3A-206ENST00000480362 ERVK-24P63145 666 aa20.01■□□□□ 0.79
UPF3A-206ENST00000480362 SREBF2Q12772 1141 aa20.01■□□□□ 0.79
UPF3A-206ENST00000480362 BAATQ14032 418 aaPredicted RBP20.01■□□□□ 0.79
UPF3A-206ENST00000480362 TPRNQ4KMQ1 711 aa20.01■□□□□ 0.79
UPF3A-206ENST00000480362 SLC30A10Q6XR72 485 aa20.01■□□□□ 0.79
UPF3A-206ENST00000480362 NCAPG2Q86XI2 1143 aa20.01■□□□□ 0.79
UPF3A-206ENST00000480362 IFNL1Q8IU54 200 aa20.01■□□□□ 0.79
UPF3A-206ENST00000480362 SYTL5Q8TDW5 730 aaPredicted RBP20.01■□□□□ 0.79
UPF3A-206ENST00000480362 MAF1Q9H063 256 aa20.01■□□□□ 0.79
UPF3A-206ENST00000480362 ZCCHC17Q9NP64 241 aaKnown RBP20.01■□□□□ 0.79
UPF3A-206ENST00000480362 COL20A1Q9P218 1284 aa20.01■□□□□ 0.79
UPF3A-206ENST00000480362 FBXO40Q9UH90 709 aa20.01■□□□□ 0.79
UPF3A-206ENST00000480362 RASSF10A6NK89 507 aa20■□□□□ 0.79
UPF3A-206ENST00000480362 PPP6R2O75170 966 aa20■□□□□ 0.79
UPF3A-206ENST00000480362 BMP15O95972 392 aa20■□□□□ 0.79
UPF3A-206ENST00000480362 ERCC3P19447 782 aa20■□□□□ 0.79
UPF3A-206ENST00000480362 MARCKSP29966 332 aaPredicted RBP20■□□□□ 0.79
UPF3A-206ENST00000480362 COPB2P35606 906 aa20■□□□□ 0.79
UPF3A-206ENST00000480362 SREBF1P36956 1147 aa20■□□□□ 0.79
UPF3A-206ENST00000480362 ME1P48163 572 aa20■□□□□ 0.79
UPF3A-206ENST00000480362 USP11P51784 963 aa20■□□□□ 0.79
UPF3A-206ENST00000480362 ARHGAP4P98171 946 aa20■□□□□ 0.79
UPF3A-206ENST00000480362 ANKRD13CQ8N6S4 541 aa20■□□□□ 0.79
UPF3A-206ENST00000480362 GPRC5AQ8NFJ5 357 aa20■□□□□ 0.79
UPF3A-206ENST00000480362 CRYGNQ8WXF5 182 aa20■□□□□ 0.79
UPF3A-206ENST00000480362 ZIC5Q96T25 663 aa20■□□□□ 0.79
UPF3A-206ENST00000480362 EHMT1Q9H9B1 1298 aa20■□□□□ 0.79
UPF3A-206ENST00000480362 PCDHA7Q9UN72 937 aa20■□□□□ 0.79
UPF3A-206ENST00000480362 TM4SF4P48230 202 aa19.99■□□□□ 0.79
UPF3A-206ENST00000480362 PTGDRQ13258 359 aa19.99■□□□□ 0.79
UPF3A-206ENST00000480362 C4orf32Q8N8J7 132 aa19.99■□□□□ 0.79
UPF3A-206ENST00000480362 JMYQ8N9B5 988 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms