RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 DCCP43146 1447 aa7.43□□□□□ -1.22
UPF3A-205ENST00000479712 PLCH1Q4KWH8 1693 aa7.42□□□□□ -1.22
UPF3A-205ENST00000479712 TRAV20A0A0B4J274 112 aa7.42□□□□□ -1.22
UPF3A-205ENST00000479712 SHOXO15266 292 aa7.42□□□□□ -1.22
UPF3A-205ENST00000479712 ITGAVP06756 1048 aa7.42□□□□□ -1.22
UPF3A-205ENST00000479712 ITGA4P13612 1032 aa7.42□□□□□ -1.22
UPF3A-205ENST00000479712 CYP7A1P22680 504 aa7.42□□□□□ -1.22
UPF3A-205ENST00000479712 PPP2R2AP63151 447 aa7.42□□□□□ -1.22
UPF3A-205ENST00000479712 HSP90AA2PQ14568 343 aaPredicted RBP7.42□□□□□ -1.22
UPF3A-205ENST00000479712 NFKBIBQ15653 356 aa7.42□□□□□ -1.22
UPF3A-205ENST00000479712 PAOXQ6QHF9 649 aa7.42□□□□□ -1.22
UPF3A-205ENST00000479712 ZNF227Q86WZ6 799 aa7.42□□□□□ -1.22
UPF3A-205ENST00000479712 ZNF513Q8N8E2 541 aaPredicted RBP7.42□□□□□ -1.22
UPF3A-205ENST00000479712 ZCRB1Q8TBF4 217 aaKnown RBP7.42□□□□□ -1.22
UPF3A-205ENST00000479712 FBXL18Q96ME1 805 aa7.42□□□□□ -1.22
UPF3A-205ENST00000479712 CDC6Q99741 560 aa7.42□□□□□ -1.22
UPF3A-205ENST00000479712 SPOCK3Q9BQ16 436 aa7.42□□□□□ -1.22
UPF3A-205ENST00000479712 AARSD1Q9BTE6 412 aaKnown RBP7.42□□□□□ -1.22
UPF3A-205ENST00000479712 GP6Q9HCN6 339 aa7.42□□□□□ -1.22
UPF3A-205ENST00000479712 C1GALT1Q9NS00 363 aa7.42□□□□□ -1.22
UPF3A-205ENST00000479712 IFT57Q9NWB7 429 aa7.42□□□□□ -1.22
UPF3A-205ENST00000479712 FBXL21Q9UKT6 434 aa7.42□□□□□ -1.22
UPF3A-205ENST00000479712 CD2APQ9Y5K6 639 aa7.42□□□□□ -1.22
UPF3A-205ENST00000479712 ADGRB3O60242 1522 aa7.42□□□□□ -1.22
UPF3A-205ENST00000479712 CEP152O94986 1710 aa7.41□□□□□ -1.22
UPF3A-205ENST00000479712 NOP56O00567 594 aaKnown RBP7.41□□□□□ -1.22
UPF3A-205ENST00000479712 IBSPP21815 317 aaPredicted RBP7.41□□□□□ -1.22
UPF3A-205ENST00000479712 BEND4Q6ZU67 534 aa7.41□□□□□ -1.22
UPF3A-205ENST00000479712 BVESQ8NE79 360 aa7.41□□□□□ -1.22
UPF3A-205ENST00000479712 ADCY4Q8NFM4 1077 aa7.41□□□□□ -1.22
UPF3A-205ENST00000479712 NLGN2Q8NFZ4 835 aa7.41□□□□□ -1.22
UPF3A-205ENST00000479712 GIMAP7Q8NHV1 300 aa7.41□□□□□ -1.22
UPF3A-205ENST00000479712 DCAF5Q96JK2 942 aa7.41□□□□□ -1.22
UPF3A-205ENST00000479712 IPO9Q96P70 1041 aaKnown RBP7.41□□□□□ -1.22
UPF3A-205ENST00000479712 ORAI2Q96SN7 254 aa7.41□□□□□ -1.22
UPF3A-205ENST00000479712 LGR4Q9BXB1 951 aa7.41□□□□□ -1.22
UPF3A-205ENST00000479712 TMX1Q9H3N1 280 aa7.41□□□□□ -1.22
UPF3A-205ENST00000479712 ADGRL3Q9HAR2 1447 aa7.41□□□□□ -1.22
UPF3A-205ENST00000479712 hCG_2014768A0A024R1R8 64 aa7.4□□□□□ -1.22
UPF3A-205ENST00000479712 CCDC163A0A0D9SF12 145 aa7.4□□□□□ -1.22
UPF3A-205ENST00000479712 DHX15O43143 795 aaKnown RBP7.4□□□□□ -1.22
UPF3A-205ENST00000479712 TOMM70O94826 608 aa7.4□□□□□ -1.22
UPF3A-205ENST00000479712 EOMESO95936 686 aa7.4□□□□□ -1.22
UPF3A-205ENST00000479712 L1CAMP32004 1257 aa7.4□□□□□ -1.22
UPF3A-205ENST00000479712 NBPF9Q3BBW0 867 aa7.4□□□□□ -1.22
UPF3A-205ENST00000479712 NOL9Q5SY16 702 aaKnown RBP7.4□□□□□ -1.22
UPF3A-205ENST00000479712 FOXB2Q5VYV0 432 aa7.4□□□□□ -1.22
UPF3A-205ENST00000479712 CRACR2BQ8N4Y2 399 aaPredicted RBP7.4□□□□□ -1.22
UPF3A-205ENST00000479712 EXOC2Q96KP1 924 aa7.4□□□□□ -1.22
UPF3A-205ENST00000479712 DUSP23Q9BVJ7 150 aa7.4□□□□□ -1.22
UPF3A-205ENST00000479712 AKT3Q9Y243 479 aa7.4□□□□□ -1.22
UPF3A-205ENST00000479712 PLAAQ9Y263 795 aa7.4□□□□□ -1.22
UPF3A-205ENST00000479712 LAMC1P11047 1609 aa7.4□□□□□ -1.22
UPF3A-205ENST00000479712 USP32Q8NFA0 1604 aa7.39□□□□□ -1.23
UPF3A-205ENST00000479712 TRPM2O94759 1503 aa7.39□□□□□ -1.23
UPF3A-205ENST00000479712 MAP3K5Q99683 1374 aa7.39□□□□□ -1.23
UPF3A-205ENST00000479712 LEFTY1O75610 366 aa7.39□□□□□ -1.23
UPF3A-205ENST00000479712 FAM87AP0C7U9 286 aa7.39□□□□□ -1.23
UPF3A-205ENST00000479712 DALRD3Q5D0E6 543 aaKnown RBP7.39□□□□□ -1.23
UPF3A-205ENST00000479712 FAM209AQ5JX71 171 aa7.39□□□□□ -1.23
UPF3A-205ENST00000479712 YOD1Q5VVQ6 348 aaPredicted RBP7.39□□□□□ -1.23
UPF3A-205ENST00000479712 POMZP3Q6PJE2 187 aa7.39□□□□□ -1.23
UPF3A-205ENST00000479712 RCC1LQ96I51 464 aaKnown RBP7.39□□□□□ -1.23
UPF3A-205ENST00000479712 COX4I2Q96KJ9 171 aa7.39□□□□□ -1.23
UPF3A-205ENST00000479712 DHRS4Q9BTZ2 278 aa7.39□□□□□ -1.23
UPF3A-205ENST00000479712 PRDM14Q9GZV8 571 aa7.39□□□□□ -1.23
UPF3A-205ENST00000479712 PRDM5Q9NQX1 630 aaPredicted RBP7.39□□□□□ -1.23
UPF3A-205ENST00000479712 MRPS23Q9Y3D9 190 aaKnown RBP7.39□□□□□ -1.23
UPF3A-205ENST00000479712 COL4A3BPQ9Y5P4 624 aa7.39□□□□□ -1.23
UPF3A-205ENST00000479712 C1orf167Q5SNV9 1468 aa7.38□□□□□ -1.23
UPF3A-205ENST00000479712 PRXQ9BXM0 1461 aa7.38□□□□□ -1.23
UPF3A-205ENST00000479712 NOS1P29475 1434 aa7.38□□□□□ -1.23
UPF3A-205ENST00000479712 PDE4DIPQ5VU43 2346 aa7.38□□□□□ -1.23
UPF3A-205ENST00000479712 A0A087WZG4 1122 aa7.38□□□□□ -1.23
UPF3A-205ENST00000479712 TRBV23-1A0A0A0MS06 115 aa7.38□□□□□ -1.23
UPF3A-205ENST00000479712 TBX1O43435 398 aa7.38□□□□□ -1.23
UPF3A-205ENST00000479712 LRRN2O75325 713 aa7.38□□□□□ -1.23
UPF3A-205ENST00000479712 PROCP04070 461 aa7.38□□□□□ -1.23
UPF3A-205ENST00000479712 CDK11BP21127 795 aaKnown RBP7.38□□□□□ -1.23
UPF3A-205ENST00000479712 RGS19P49795 217 aa7.38□□□□□ -1.23
UPF3A-205ENST00000479712 ZNF445P59923 1031 aa7.38□□□□□ -1.23
UPF3A-205ENST00000479712 C21orf62-AS1Q17RA5 79 aa7.38□□□□□ -1.23
UPF3A-205ENST00000479712 TRIM59Q8IWR1 403 aa7.38□□□□□ -1.23
UPF3A-205ENST00000479712 SCUBE1Q8IWY4 988 aa7.38□□□□□ -1.23
UPF3A-205ENST00000479712 BRF1Q92994 677 aa7.38□□□□□ -1.23
UPF3A-205ENST00000479712 KISS1RQ969F8 398 aaPredicted RBP7.38□□□□□ -1.23
UPF3A-205ENST00000479712 MRGPRX3Q96LB0 322 aa7.38□□□□□ -1.23
UPF3A-205ENST00000479712 BRINP2Q9C0B6 783 aa7.38□□□□□ -1.23
UPF3A-205ENST00000479712 NOL6Q9H6R4 1146 aaKnown RBP7.38□□□□□ -1.23
UPF3A-205ENST00000479712 CGGBP1Q9UFW8 167 aaPredicted RBP7.38□□□□□ -1.23
UPF3A-205ENST00000479712 EMC9Q9Y3B6 208 aa7.38□□□□□ -1.23
UPF3A-205ENST00000479712 FHOD1Q9Y613 1164 aa7.38□□□□□ -1.23
UPF3A-205ENST00000479712 CROCC2H7BZ55 1655 aa7.38□□□□□ -1.23
UPF3A-205ENST00000479712 PRODHO43272 600 aa7.37□□□□□ -1.23
UPF3A-205ENST00000479712 FGFR1P11362 822 aa7.37□□□□□ -1.23
UPF3A-205ENST00000479712 PABPC1P11940 636 aaKnown RBP7.37□□□□□ -1.23
UPF3A-205ENST00000479712 GRIA2P42262 883 aa7.37□□□□□ -1.23
UPF3A-205ENST00000479712 IGBP1P78318 339 aa7.37□□□□□ -1.23
UPF3A-205ENST00000479712 SNW1Q13573 536 aaKnown RBP7.37□□□□□ -1.23
UPF3A-205ENST00000479712 PPP2R5DQ14738 602 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms