RNA–Protein interactions for RNA: ENST00000479515.1

PHTF2-212, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 5

Gene PHTF2, Length 2,467 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-212ENST00000479515 CCDC113Q9H0I3 377 aa5.98□□□□□ -1.45
PHTF2-212ENST00000479515 REV1Q9UBZ9 1251 aa5.98□□□□□ -1.45
PHTF2-212ENST00000479515 CSADQ9Y600 493 aa5.98□□□□□ -1.45
PHTF2-212ENST00000479515 BTAF1O14981 1849 aa5.97□□□□□ -1.45
PHTF2-212ENST00000479515 BRWD3Q6RI45 1802 aa5.97□□□□□ -1.45
PHTF2-212ENST00000479515 RRP9O43818 475 aaKnown RBP5.97□□□□□ -1.45
PHTF2-212ENST00000479515 SNRPA1P09661 255 aaKnown RBP5.97□□□□□ -1.45
PHTF2-212ENST00000479515 LIG1P18858 919 aa5.97□□□□□ -1.45
PHTF2-212ENST00000479515 GUCY2CP25092 1073 aa5.97□□□□□ -1.45
PHTF2-212ENST00000479515 ETF1P62495 437 aaKnown RBP5.97□□□□□ -1.45
PHTF2-212ENST00000479515 HS1BP3Q53T59 392 aa5.97□□□□□ -1.45
PHTF2-212ENST00000479515 MSL1Q68DK7 614 aa5.97□□□□□ -1.45
PHTF2-212ENST00000479515 C12orf40Q86WS4 652 aa5.97□□□□□ -1.45
PHTF2-212ENST00000479515 TMEM40Q8WWA1 233 aa5.97□□□□□ -1.45
PHTF2-212ENST00000479515 OSGEPQ9NPF4 335 aa5.97□□□□□ -1.45
PHTF2-212ENST00000479515 KRT82Q9NSB4 513 aa5.97□□□□□ -1.45
PHTF2-212ENST00000479515 LMBRD1Q9NUN5 540 aa5.97□□□□□ -1.45
PHTF2-212ENST00000479515 FANCLQ9NW38 375 aa5.97□□□□□ -1.45
PHTF2-212ENST00000479515 PFDN2Q9UHV9 154 aa5.97□□□□□ -1.45
PHTF2-212ENST00000479515 MSRB2Q9Y3D2 182 aa5.97□□□□□ -1.45
PHTF2-212ENST00000479515 GFRA2O00451 464 aa5.97□□□□□ -1.45
PHTF2-212ENST00000479515 HMMRO75330 724 aa5.97□□□□□ -1.45
PHTF2-212ENST00000479515 GJB6O95452 261 aa5.97□□□□□ -1.45
PHTF2-212ENST00000479515 CASP7P55210 303 aa5.97□□□□□ -1.45
PHTF2-212ENST00000479515 KRT24Q2M2I5 525 aa5.97□□□□□ -1.45
PHTF2-212ENST00000479515 MCTP1Q6DN14 999 aa5.97□□□□□ -1.45
PHTF2-212ENST00000479515 C20orf204Q6ZNR8 217 aa5.97□□□□□ -1.45
PHTF2-212ENST00000479515 ZSCAN30Q86W11 494 aa5.97□□□□□ -1.45
PHTF2-212ENST00000479515 C16orf71Q8IYS4 520 aaPredicted RBP5.97□□□□□ -1.45
PHTF2-212ENST00000479515 ZSCAN1Q8NBB4 408 aa5.97□□□□□ -1.45
PHTF2-212ENST00000479515 KLHL23Q8NBE8 558 aa5.97□□□□□ -1.45
PHTF2-212ENST00000479515 WDR89Q96FK6 387 aaPredicted RBP5.97□□□□□ -1.45
PHTF2-212ENST00000479515 TEX13AQ9BXU3 409 aaPredicted RBP5.97□□□□□ -1.45
PHTF2-212ENST00000479515 NRSN2Q9GZP1 204 aa5.97□□□□□ -1.45
PHTF2-212ENST00000479515 RAD18Q9NS91 495 aa5.97□□□□□ -1.45
PHTF2-212ENST00000479515 GMIPQ9P107 970 aa5.97□□□□□ -1.45
PHTF2-212ENST00000479515 SNCAIPQ9Y6H5 919 aa5.97□□□□□ -1.45
PHTF2-212ENST00000479515 COL5A3P25940 1745 aaPredicted RBP5.96□□□□□ -1.45
PHTF2-212ENST00000479515 B2RBV5 119 aa5.96□□□□□ -1.46
PHTF2-212ENST00000479515 ERC2O15083 957 aa5.96□□□□□ -1.46
PHTF2-212ENST00000479515 KCNQ3O43525 872 aa5.96□□□□□ -1.46
PHTF2-212ENST00000479515 TPM2P07951 284 aa5.96□□□□□ -1.46
PHTF2-212ENST00000479515 ZSCAN23Q3MJ62 389 aa5.96□□□□□ -1.46
PHTF2-212ENST00000479515 CHSY3Q70JA7 882 aa5.96□□□□□ -1.46
PHTF2-212ENST00000479515 MARCH10Q8NA82 808 aaPredicted RBP5.96□□□□□ -1.46
PHTF2-212ENST00000479515 SMARCC1Q92922 1105 aaPredicted RBP5.96□□□□□ -1.46
PHTF2-212ENST00000479515 HYPKQ9NX55 129 aa5.96□□□□□ -1.46
PHTF2-212ENST00000479515 DBF4Q9UBU7 674 aaPredicted RBP5.96□□□□□ -1.46
PHTF2-212ENST00000479515 LY75O60449 1722 aa5.96□□□□□ -1.46
PHTF2-212ENST00000479515 NUP188Q5SRE5 1749 aa5.96□□□□□ -1.46
PHTF2-212ENST00000479515 A0A1W2PQH9 124 aa5.96□□□□□ -1.46
PHTF2-212ENST00000479515 SLFN14P0C7P3 912 aa5.96□□□□□ -1.46
PHTF2-212ENST00000479515 IBSPP21815 317 aaPredicted RBP5.96□□□□□ -1.46
PHTF2-212ENST00000479515 MCM2P49736 904 aa5.96□□□□□ -1.46
PHTF2-212ENST00000479515 SRSF11Q05519 484 aaKnown RBP5.96□□□□□ -1.46
PHTF2-212ENST00000479515 RASGRF1Q13972 1273 aa5.96□□□□□ -1.46
PHTF2-212ENST00000479515 GLIPR1L2Q4G1C9 344 aa5.96□□□□□ -1.46
PHTF2-212ENST00000479515 DMRTC2Q8IXT2 367 aaPredicted RBP5.96□□□□□ -1.46
PHTF2-212ENST00000479515 LILRB2Q8N423 598 aa5.96□□□□□ -1.46
PHTF2-212ENST00000479515 OTUD7AQ8TE49 926 aaPredicted RBP5.96□□□□□ -1.46
PHTF2-212ENST00000479515 EDARADDQ8WWZ3 215 aa5.96□□□□□ -1.46
PHTF2-212ENST00000479515 ZNF496Q96IT1 587 aaPredicted RBP5.96□□□□□ -1.46
PHTF2-212ENST00000479515 MEIS3Q99687 375 aa5.96□□□□□ -1.46
PHTF2-212ENST00000479515 KANSL2Q9H9L4 492 aa5.96□□□□□ -1.46
PHTF2-212ENST00000479515 ARFGEF2Q9Y6D5 1785 aa5.95□□□□□ -1.46
PHTF2-212ENST00000479515 KAT6BQ8WYB5 2073 aa5.95□□□□□ -1.46
PHTF2-212ENST00000479515 ENPP3O14638 875 aa5.95□□□□□ -1.46
PHTF2-212ENST00000479515 PGRP06401 933 aa5.95□□□□□ -1.46
PHTF2-212ENST00000479515 CCT4P50991 539 aaKnown RBP5.95□□□□□ -1.46
PHTF2-212ENST00000479515 TERF1P54274 439 aa5.95□□□□□ -1.46
PHTF2-212ENST00000479515 RBM6P78332 1123 aaKnown RBP5.95□□□□□ -1.46
PHTF2-212ENST00000479515 SLC39A6Q13433 755 aa5.95□□□□□ -1.46
PHTF2-212ENST00000479515 HP1BP3Q5SSJ5 553 aaPredicted RBP5.95□□□□□ -1.46
PHTF2-212ENST00000479515 OVOS1Q6IE37 1185 aa5.95□□□□□ -1.46
PHTF2-212ENST00000479515 CAVIN1Q6NZI2 390 aaKnown RBP5.95□□□□□ -1.46
PHTF2-212ENST00000479515 C19orf47Q8N9M1 422 aaKnown RBP5.95□□□□□ -1.46
PHTF2-212ENST00000479515 PIGBQ92521 554 aa5.95□□□□□ -1.46
PHTF2-212ENST00000479515 APPBP2Q92624 585 aa5.95□□□□□ -1.46
PHTF2-212ENST00000479515 PDLIM2Q96JY6 352 aa5.95□□□□□ -1.46
PHTF2-212ENST00000479515 DDX21Q9NR30 783 aaKnown RBP eCLIP5.95□□□□□ -1.46
PHTF2-212ENST00000479515 CACNA2D2Q9NY47 1150 aa5.95□□□□□ -1.46
PHTF2-212ENST00000479515 RGPD3A6NKT7 1758 aaPredicted RBP5.95□□□□□ -1.46
PHTF2-212ENST00000479515 RGPD4Q7Z3J3 1758 aa5.95□□□□□ -1.46
PHTF2-212ENST00000479515 LOC100289279A0A1B0GTE1 492 aa5.94□□□□□ -1.46
PHTF2-212ENST00000479515 H3BM21 787 aa5.94□□□□□ -1.46
PHTF2-212ENST00000479515 DDX3YO15523 660 aaKnown RBP5.94□□□□□ -1.46
PHTF2-212ENST00000479515 ZNF862O60290 1169 aa5.94□□□□□ -1.46
PHTF2-212ENST00000479515 CTSBP07858 339 aa5.94□□□□□ -1.46
PHTF2-212ENST00000479515 SELPP16109 830 aa5.94□□□□□ -1.46
PHTF2-212ENST00000479515 MSNP26038 577 aaKnown RBP5.94□□□□□ -1.46
PHTF2-212ENST00000479515 PDE1AP54750 535 aa5.94□□□□□ -1.46
PHTF2-212ENST00000479515 PKP1Q13835 747 aa5.94□□□□□ -1.46
PHTF2-212ENST00000479515 HSP90AA2PQ14568 343 aaPredicted RBP5.94□□□□□ -1.46
PHTF2-212ENST00000479515 SUZ12Q15022 739 aaKnown RBP5.94□□□□□ -1.46
PHTF2-212ENST00000479515 SETDB1Q15047 1291 aa5.94□□□□□ -1.46
PHTF2-212ENST00000479515 C1orf229Q6ZS94 237 aaPredicted RBP5.94□□□□□ -1.46
PHTF2-212ENST00000479515 NLRC3Q7RTR2 1065 aa5.94□□□□□ -1.46
PHTF2-212ENST00000479515 FAM178BQ8IXR5 827 aa5.94□□□□□ -1.46
PHTF2-212ENST00000479515 SLC12A7Q9Y666 1083 aa5.94□□□□□ -1.46
PHTF2-212ENST00000479515 SALL3Q9BXA9 1300 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms