RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 TMEM63BQ5T3F8 832 aa15.58■□□□□ 0.08
VCL-205ENST00000478896 SLC30A10Q6XR72 485 aa15.58■□□□□ 0.08
VCL-205ENST00000478896 RNF207Q6ZRF8 634 aa15.58■□□□□ 0.08
VCL-205ENST00000478896 MFSD6Q6ZSS7 791 aa15.58■□□□□ 0.08
VCL-205ENST00000478896 MORC4Q8TE76 937 aa15.58■□□□□ 0.08
VCL-205ENST00000478896 WDR11Q9BZH6 1224 aa15.58■□□□□ 0.08
VCL-205ENST00000478896 LNPKQ9C0E8 428 aa15.58■□□□□ 0.08
VCL-205ENST00000478896 MSRAQ9UJ68 235 aa15.58■□□□□ 0.08
VCL-205ENST00000478896 PNMA2Q9UL42 364 aa15.58■□□□□ 0.08
VCL-205ENST00000478896 UMODL1Q5DID0 1318 aa15.58■□□□□ 0.08
VCL-205ENST00000478896 UNC80Q8N2C7 3258 aa15.58■□□□□ 0.08
VCL-205ENST00000478896 FGBP02675 491 aa15.57■□□□□ 0.08
VCL-205ENST00000478896 MYL3P08590 195 aa15.57■□□□□ 0.08
VCL-205ENST00000478896 PCP11498 1178 aaKnown RBP15.57■□□□□ 0.08
VCL-205ENST00000478896 CPT1AP50416 773 aa15.57■□□□□ 0.08
VCL-205ENST00000478896 MFAP1P55081 439 aaKnown RBP15.57■□□□□ 0.08
VCL-205ENST00000478896 AKNAD1Q5T1N1 836 aa15.57■□□□□ 0.08
VCL-205ENST00000478896 RASIP1Q5U651 963 aa15.57■□□□□ 0.08
VCL-205ENST00000478896 OTOP2Q7RTS6 562 aa15.57■□□□□ 0.08
VCL-205ENST00000478896 OR6J1Q8NGC5 347 aa15.57■□□□□ 0.08
VCL-205ENST00000478896 HERVK_113Q902F9 699 aa15.57■□□□□ 0.08
VCL-205ENST00000478896 TRPV6Q9H1D0 765 aa15.57■□□□□ 0.08
VCL-205ENST00000478896 RNF41Q9H4P4 317 aaPredicted RBP15.57■□□□□ 0.08
VCL-205ENST00000478896 GPHNQ9NQX3 736 aaPredicted RBP15.57■□□□□ 0.08
VCL-205ENST00000478896 POLR3EQ9NVU0 708 aa15.57■□□□□ 0.08
VCL-205ENST00000478896 GRIN2DO15399 1336 aa15.57■□□□□ 0.08
VCL-205ENST00000478896 RAD50Q92878 1312 aa15.57■□□□□ 0.08
VCL-205ENST00000478896 LAMA4Q16363 1823 aa15.57■□□□□ 0.08
VCL-205ENST00000478896 LOC102724159A0A0B4J2E5 919 aa15.56■□□□□ 0.08
VCL-205ENST00000478896 PDE4DQ08499 809 aa15.56■□□□□ 0.08
VCL-205ENST00000478896 PPP2R5BQ15173 497 aa15.56■□□□□ 0.08
VCL-205ENST00000478896 PWP2Q15269 919 aaKnown RBP15.56■□□□□ 0.08
VCL-205ENST00000478896 BRDTQ58F21 947 aaPredicted RBP15.56■□□□□ 0.08
VCL-205ENST00000478896 TBC1D10CQ8IV04 446 aa15.56■□□□□ 0.08
VCL-205ENST00000478896 PPM1EQ8WY54 764 aa15.56■□□□□ 0.08
VCL-205ENST00000478896 SYMPKQ92797 1274 aaKnown RBP15.56■□□□□ 0.08
VCL-205ENST00000478896 NOC4LQ9BVI4 516 aaKnown RBP15.56■□□□□ 0.08
VCL-205ENST00000478896 ALDH8A1Q9H2A2 487 aaPredicted RBP15.56■□□□□ 0.08
VCL-205ENST00000478896 PRDM12Q9H4Q4 367 aa15.56■□□□□ 0.08
VCL-205ENST00000478896 WDR19Q8NEZ3 1342 aa15.55■□□□□ 0.08
VCL-205ENST00000478896 ZBBXA8MT70 800 aa15.55■□□□□ 0.08
VCL-205ENST00000478896 RPS6P62753 249 aaKnown RBP15.55■□□□□ 0.08
VCL-205ENST00000478896 ZNF543Q08ER8 600 aa15.55■□□□□ 0.08
VCL-205ENST00000478896 USH1GQ495M9 461 aa15.55■□□□□ 0.08
VCL-205ENST00000478896 FAM47CQ5HY64 1035 aa15.55■□□□□ 0.08
VCL-205ENST00000478896 TICAM2Q86XR7 235 aa15.55■□□□□ 0.08
VCL-205ENST00000478896 RPUSD2Q8IZ73 545 aaKnown RBP15.55■□□□□ 0.08
VCL-205ENST00000478896 USP38Q8NB14 1042 aa15.55■□□□□ 0.08
VCL-205ENST00000478896 ESR2Q92731 530 aa15.55■□□□□ 0.08
VCL-205ENST00000478896 TTC14Q96N46 770 aa15.55■□□□□ 0.08
VCL-205ENST00000478896 ZKSCAN3Q9BRR0 538 aa15.55■□□□□ 0.08
VCL-205ENST00000478896 WNT8AQ9H1J5 351 aa15.55■□□□□ 0.08
VCL-205ENST00000478896 NKX2-4Q9H2Z4 354 aa15.55■□□□□ 0.08
VCL-205ENST00000478896 CXXC1Q9P0U4 656 aaPredicted RBP15.55■□□□□ 0.08
VCL-205ENST00000478896 EYSQ5T1H1 3165 aa15.55■□□□□ 0.08
VCL-205ENST00000478896 TNKSO95271 1327 aa15.54■□□□□ 0.08
VCL-205ENST00000478896 NEDD4P46934 1319 aa15.54■□□□□ 0.08
VCL-205ENST00000478896 B4DLN1 442 aa15.54■□□□□ 0.08
VCL-205ENST00000478896 ZNF213O14771 459 aa15.54■□□□□ 0.08
VCL-205ENST00000478896 NKRFO15226 690 aaKnown RBP eCLIP15.54■□□□□ 0.08
VCL-205ENST00000478896 SUPT20HL2P0C7V6 817 aa15.54■□□□□ 0.08
VCL-205ENST00000478896 MRPL12P52815 198 aaKnown RBP15.54■□□□□ 0.08
VCL-205ENST00000478896 PURAQ00577 322 aaKnown RBP15.54■□□□□ 0.08
VCL-205ENST00000478896 GPATCH4Q5T3I0 446 aaKnown RBP15.54■□□□□ 0.08
VCL-205ENST00000478896 B4GALNT3Q6L9W6 998 aa15.54■□□□□ 0.08
VCL-205ENST00000478896 DNERQ8NFT8 737 aa15.54■□□□□ 0.08
VCL-205ENST00000478896 CLEC4DQ8WXI8 215 aa15.54■□□□□ 0.08
VCL-205ENST00000478896 SCLYQ96I15 445 aa15.54■□□□□ 0.08
VCL-205ENST00000478896 MTG1Q9BT17 334 aaPredicted RBP15.54■□□□□ 0.08
VCL-205ENST00000478896 SLC28A3Q9HAS3 691 aa15.54■□□□□ 0.08
VCL-205ENST00000478896 TRMT13Q9NUP7 481 aaKnown RBP15.54■□□□□ 0.08
VCL-205ENST00000478896 MYH6P13533 1939 aa15.54■□□□□ 0.08
VCL-205ENST00000478896 GOLGA8HP0CJ92 632 aa15.53■□□□□ 0.08
VCL-205ENST00000478896 SNHG28P0DPA3 235 aa15.53■□□□□ 0.08
VCL-205ENST00000478896 CYP2C9P11712 490 aa15.53■□□□□ 0.08
VCL-205ENST00000478896 SDSP20132 328 aa15.53■□□□□ 0.08
VCL-205ENST00000478896 IGFBP4P22692 258 aa15.53■□□□□ 0.08
VCL-205ENST00000478896 IQCA1Q86XH1 822 aa15.53■□□□□ 0.08
VCL-205ENST00000478896 SCFD2Q8WU76 684 aa15.53■□□□□ 0.08
VCL-205ENST00000478896 DIAPH3Q9NSV4 1193 aa15.53■□□□□ 0.08
VCL-205ENST00000478896 SLC4A7Q9Y6M7 1214 aa15.53■□□□□ 0.08
VCL-205ENST00000478896 TANC1Q9C0D5 1861 aa15.52■□□□□ 0.08
VCL-205ENST00000478896 MYO9BQ13459 2157 aa15.52■□□□□ 0.08
VCL-205ENST00000478896 SCN5AQ14524 2016 aa15.52■□□□□ 0.08
VCL-205ENST00000478896 RBM47A0AV96 593 aaKnown RBP15.52■□□□□ 0.08
VCL-205ENST00000478896 PFKMP08237 780 aa15.52■□□□□ 0.08
VCL-205ENST00000478896 CDC37Q16543 378 aaPredicted RBP15.52■□□□□ 0.08
VCL-205ENST00000478896 TJAP1Q5JTD0 557 aa15.52■□□□□ 0.08
VCL-205ENST00000478896 PPP2R2DQ66LE6 453 aa15.52■□□□□ 0.08
VCL-205ENST00000478896 DEFB128Q7Z7B8 93 aa15.52■□□□□ 0.08
VCL-205ENST00000478896 KAT14Q9H8E8 782 aa15.52■□□□□ 0.08
VCL-205ENST00000478896 SCN10AQ9Y5Y9 1956 aa15.52■□□□□ 0.07
VCL-205ENST00000478896 DHX16O60231 1041 aaKnown RBP15.51■□□□□ 0.07
VCL-205ENST00000478896 KDM4AO75164 1064 aa15.51■□□□□ 0.07
VCL-205ENST00000478896 TXNP10599 105 aaKnown RBP15.51■□□□□ 0.07
VCL-205ENST00000478896 RABGGTBP53611 331 aa15.51■□□□□ 0.07
VCL-205ENST00000478896 CHMP4BP1P59074 171 aa15.51■□□□□ 0.07
VCL-205ENST00000478896 TTLL4Q14679 1199 aa15.51■□□□□ 0.07
VCL-205ENST00000478896 CCDC178Q5BJE1 867 aa15.51■□□□□ 0.07
VCL-205ENST00000478896 CWC27Q6UX04 472 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms