RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 SUGCTQ9HAC7 445 aa15.68■□□□□ 0.1
NPHP4-208ENST00000478423 SAMSN1Q9NSI8 373 aaKnown RBP15.68■□□□□ 0.1
NPHP4-208ENST00000478423 RSPH14Q9UHP6 348 aa15.68■□□□□ 0.1
NPHP4-208ENST00000478423 FAM196BA6NMK8 535 aa15.67■□□□□ 0.1
NPHP4-208ENST00000478423 CSF1RP07333 972 aa15.67■□□□□ 0.1
NPHP4-208ENST00000478423 DCUN1D2Q6PH85 259 aa15.67■□□□□ 0.1
NPHP4-208ENST00000478423 KLHL7Q8IXQ5 586 aa15.67■□□□□ 0.1
NPHP4-208ENST00000478423 U2AF1L4Q8WU68 220 aaKnown RBP15.67■□□□□ 0.1
NPHP4-208ENST00000478423 UBLCP1Q8WVY7 318 aaPredicted RBP15.67■□□□□ 0.1
NPHP4-208ENST00000478423 ZNF215Q9UL58 517 aaPredicted RBP15.67■□□□□ 0.1
NPHP4-208ENST00000478423 WDR19Q8NEZ3 1342 aa15.67■□□□□ 0.1
NPHP4-208ENST00000478423 NCAPG2Q86XI2 1143 aa15.67■□□□□ 0.1
NPHP4-208ENST00000478423 ANKRD13CQ8N6S4 541 aa15.67■□□□□ 0.1
NPHP4-208ENST00000478423 GOLGA5Q8TBA6 731 aa15.67■□□□□ 0.1
NPHP4-208ENST00000478423 ENOX1Q8TC92 643 aaKnown RBP15.67■□□□□ 0.1
NPHP4-208ENST00000478423 DHTKD1Q96HY7 919 aaPredicted RBP15.67■□□□□ 0.1
NPHP4-208ENST00000478423 TDRD3Q9H7E2 651 aaKnown RBP15.67■□□□□ 0.1
NPHP4-208ENST00000478423 CRKP46108 304 aa15.67■□□□□ 0.1
NPHP4-208ENST00000478423 CFAP221Q4G0U5 840 aa15.67■□□□□ 0.1
NPHP4-208ENST00000478423 SYDE2Q5VT97 1194 aa15.67■□□□□ 0.1
NPHP4-208ENST00000478423 TMED8Q6PL24 325 aaPredicted RBP15.67■□□□□ 0.1
NPHP4-208ENST00000478423 P2RX5Q93086 422 aa15.67■□□□□ 0.1
NPHP4-208ENST00000478423 ZNF577Q9BSK1 485 aa15.67■□□□□ 0.1
NPHP4-208ENST00000478423 MTA3Q9BTC8 594 aa15.67■□□□□ 0.1
NPHP4-208ENST00000478423 HAUS4Q9H6D7 363 aa15.67■□□□□ 0.1
NPHP4-208ENST00000478423 OGFRQ9NZT2 677 aa15.67■□□□□ 0.1
NPHP4-208ENST00000478423 IQSEC2Q5JU85 1478 aa15.67■□□□□ 0.1
NPHP4-208ENST00000478423 KIF4AO95239 1232 aa15.66■□□□□ 0.1
NPHP4-208ENST00000478423 PLCG1P19174 1290 aa15.66■□□□□ 0.1
NPHP4-208ENST00000478423 NR2F2P24468 414 aa15.66■□□□□ 0.1
NPHP4-208ENST00000478423 GOLGA8FQ08AF8 430 aa15.66■□□□□ 0.1
NPHP4-208ENST00000478423 GOLGA8DPQ0D2H9 430 aa15.66■□□□□ 0.1
NPHP4-208ENST00000478423 CDC37Q16543 378 aaPredicted RBP15.66■□□□□ 0.1
NPHP4-208ENST00000478423 MYO1AQ9UBC5 1043 aa15.66■□□□□ 0.1
NPHP4-208ENST00000478423 STK17AQ9UEE5 414 aa15.66■□□□□ 0.1
NPHP4-208ENST00000478423 COMMD10Q9Y6G5 202 aa15.66■□□□□ 0.1
NPHP4-208ENST00000478423 PNMA6FA0A0J9YX94 578 aa15.66■□□□□ 0.1
NPHP4-208ENST00000478423 MAP3K9P80192 1104 aa15.66■□□□□ 0.1
NPHP4-208ENST00000478423 FKBP3Q00688 224 aaKnown RBP15.66■□□□□ 0.1
NPHP4-208ENST00000478423 ERCC6LQ2NKX8 1250 aa15.66■□□□□ 0.1
NPHP4-208ENST00000478423 ARL6IP4Q66PJ3 421 aaKnown RBP15.66■□□□□ 0.1
NPHP4-208ENST00000478423 CIAPIN1Q6FI81 312 aa15.66■□□□□ 0.1
NPHP4-208ENST00000478423 ARMCX5Q6P1M9 558 aa15.66■□□□□ 0.1
NPHP4-208ENST00000478423 METTL13Q8N6R0 699 aa15.66■□□□□ 0.1
NPHP4-208ENST00000478423 SELENOSQ9BQE4 189 aa15.66■□□□□ 0.1
NPHP4-208ENST00000478423 STMN4Q9H169 189 aaPredicted RBP15.66■□□□□ 0.1
NPHP4-208ENST00000478423 ACTN4O43707 911 aaKnown RBP15.66■□□□□ 0.1
NPHP4-208ENST00000478423 CAMTA2O94983 1202 aa15.66■□□□□ 0.1
NPHP4-208ENST00000478423 ATP1A3P13637 1013 aa15.66■□□□□ 0.1
NPHP4-208ENST00000478423 EEF1GP26641 437 aaKnown RBP15.66■□□□□ 0.1
NPHP4-208ENST00000478423 RTKN2Q8IZC4 609 aa15.66■□□□□ 0.1
NPHP4-208ENST00000478423 TRIM58Q8NG06 486 aa15.66■□□□□ 0.1
NPHP4-208ENST00000478423 AGTPBP1Q9UPW5 1226 aa15.66■□□□□ 0.1
NPHP4-208ENST00000478423 MEIS1O00470 390 aa15.66■□□□□ 0.1
NPHP4-208ENST00000478423 LIG4P49917 911 aa15.66■□□□□ 0.1
NPHP4-208ENST00000478423 ZNF658Q5TYW1 1059 aaPredicted RBP15.66■□□□□ 0.1
NPHP4-208ENST00000478423 TMEM179Q6ZVK1 233 aa15.66■□□□□ 0.1
NPHP4-208ENST00000478423 ZNF365Q70YC5 407 aa15.66■□□□□ 0.1
NPHP4-208ENST00000478423 DAAM2Q86T65 1068 aa15.66■□□□□ 0.1
NPHP4-208ENST00000478423 SGMS1Q86VZ5 419 aa15.66■□□□□ 0.1
NPHP4-208ENST00000478423 CEP95Q96GE4 821 aa15.66■□□□□ 0.1
NPHP4-208ENST00000478423 CA8P35219 290 aa15.65■□□□□ 0.1
NPHP4-208ENST00000478423 TRPC6Q9Y210 931 aa15.65■□□□□ 0.1
NPHP4-208ENST00000478423 USTQ9Y2C2 406 aa15.65■□□□□ 0.1
NPHP4-208ENST00000478423 KIAA1210Q9ULL0 1709 aa15.65■□□□□ 0.1
NPHP4-208ENST00000478423 DLATP10515 647 aaKnown RBP15.65■□□□□ 0.1
NPHP4-208ENST00000478423 SLC8A3P57103 927 aa15.65■□□□□ 0.1
NPHP4-208ENST00000478423 OXER1Q8TDS5 423 aa15.65■□□□□ 0.1
NPHP4-208ENST00000478423 WDR11Q9BZH6 1224 aa15.65■□□□□ 0.1
NPHP4-208ENST00000478423 BCL2L12Q9HB09 334 aa15.65■□□□□ 0.1
NPHP4-208ENST00000478423 ZC3H13Q5T200 1668 aaKnown RBP15.65■□□□□ 0.1
NPHP4-208ENST00000478423 STK36Q9NRP7 1315 aa15.65■□□□□ 0.1
NPHP4-208ENST00000478423 USP17L5A8MUK1 530 aa15.65■□□□□ 0.1
NPHP4-208ENST00000478423 SF3B3Q15393 1217 aaKnown RBP15.65■□□□□ 0.1
NPHP4-208ENST00000478423 PFKFB3Q16875 520 aaPredicted RBP15.65■□□□□ 0.1
NPHP4-208ENST00000478423 EXOC3L4Q17RC7 722 aa15.65■□□□□ 0.1
NPHP4-208ENST00000478423 PPM1KQ8N3J5 372 aa15.65■□□□□ 0.1
NPHP4-208ENST00000478423 PAGE5Q96GU1 130 aa15.65■□□□□ 0.1
NPHP4-208ENST00000478423 MAK16Q9BXY0 300 aaKnown RBP15.65■□□□□ 0.1
NPHP4-208ENST00000478423 IL25Q9H293 177 aa15.65■□□□□ 0.1
NPHP4-208ENST00000478423 MROH7-TTC4A0A0A0MT08 1334 aa15.65■□□□□ 0.1
NPHP4-208ENST00000478423 IQGAP1P46940 1657 aa15.65■□□□□ 0.1
NPHP4-208ENST00000478423 PSDA5PKW4 1024 aaPredicted RBP15.64■□□□□ 0.1
NPHP4-208ENST00000478423 LRRIQ4A6NIV6 560 aa15.64■□□□□ 0.1
NPHP4-208ENST00000478423 RFX5P48382 616 aaPredicted RBP15.64■□□□□ 0.1
NPHP4-208ENST00000478423 SLC27A3Q5K4L6 730 aa15.64■□□□□ 0.1
NPHP4-208ENST00000478423 IFT20Q8IY31 132 aa15.64■□□□□ 0.1
NPHP4-208ENST00000478423 TSKSQ9UJT2 592 aa15.64■□□□□ 0.1
NPHP4-208ENST00000478423 SPATA31A1Q5TZJ5 1347 aa15.64■□□□□ 0.09
NPHP4-208ENST00000478423 ZNF609O15014 1411 aa15.64■□□□□ 0.09
NPHP4-208ENST00000478423 HOXA13P31271 388 aaPredicted RBP15.64■□□□□ 0.09
NPHP4-208ENST00000478423 SYCE1Q8N0S2 351 aa15.64■□□□□ 0.09
NPHP4-208ENST00000478423 UTYO14607 1347 aa15.64■□□□□ 0.09
NPHP4-208ENST00000478423 JCADQ9P266 1359 aa15.64■□□□□ 0.09
NPHP4-208ENST00000478423 MYL1P05976 194 aa15.64■□□□□ 0.09
NPHP4-208ENST00000478423 GPSM2P81274 684 aa15.64■□□□□ 0.09
NPHP4-208ENST00000478423 DALRD3Q5D0E6 543 aaKnown RBP15.64■□□□□ 0.09
NPHP4-208ENST00000478423 TSNARE1Q96NA8 513 aa15.64■□□□□ 0.09
NPHP4-208ENST00000478423 UBN2Q6ZU65 1347 aa15.64■□□□□ 0.09
NPHP4-208ENST00000478423 EXOSC10Q01780 885 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms