RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 FOSL2P15408 326 aa19.68■□□□□ 0.74
TRIM13-208ENST00000478111 ALDH5A1P51649 535 aaPredicted RBP19.68■□□□□ 0.74
TRIM13-208ENST00000478111 ZNF543Q08ER8 600 aa19.68■□□□□ 0.74
TRIM13-208ENST00000478111 DUSP28Q4G0W2 176 aa19.68■□□□□ 0.74
TRIM13-208ENST00000478111 AKNAD1Q5T1N1 836 aa19.68■□□□□ 0.74
TRIM13-208ENST00000478111 KIAA1211Q6ZU35 1233 aa19.68■□□□□ 0.74
TRIM13-208ENST00000478111 TBC1D10CQ8IV04 446 aa19.68■□□□□ 0.74
TRIM13-208ENST00000478111 TTC14Q96N46 770 aa19.68■□□□□ 0.74
TRIM13-208ENST00000478111 RBM47A0AV96 593 aaKnown RBP19.67■□□□□ 0.74
TRIM13-208ENST00000478111 PBX2P40425 430 aa19.67■□□□□ 0.74
TRIM13-208ENST00000478111 PSMC6P62333 389 aa19.67■□□□□ 0.74
TRIM13-208ENST00000478111 MFSD6Q6ZSS7 791 aa19.67■□□□□ 0.74
TRIM13-208ENST00000478111 PBX4Q9BYU1 374 aa19.67■□□□□ 0.74
TRIM13-208ENST00000478111 TRPV6Q9H1D0 765 aa19.67■□□□□ 0.74
TRIM13-208ENST00000478111 ZNF576Q9H609 170 aa19.67■□□□□ 0.74
TRIM13-208ENST00000478111 IL23AQ9NPF7 189 aa19.67■□□□□ 0.74
TRIM13-208ENST00000478111 ADD3Q9UEY8 706 aaKnown RBP19.67■□□□□ 0.74
TRIM13-208ENST00000478111 SCN10AQ9Y5Y9 1956 aa19.66■□□□□ 0.74
TRIM13-208ENST00000478111 LOC102724159A0A0B4J2E5 919 aa19.66■□□□□ 0.74
TRIM13-208ENST00000478111 TRIM6-TRIM34B2RNG4 842 aa19.66■□□□□ 0.74
TRIM13-208ENST00000478111 B4GALT4O60513 344 aa19.66■□□□□ 0.74
TRIM13-208ENST00000478111 PCP11498 1178 aaKnown RBP19.66■□□□□ 0.74
TRIM13-208ENST00000478111 PWP2Q15269 919 aaKnown RBP19.66■□□□□ 0.74
TRIM13-208ENST00000478111 PSRC1Q6PGN9 363 aaPredicted RBP19.66■□□□□ 0.74
TRIM13-208ENST00000478111 SLC30A10Q6XR72 485 aa19.66■□□□□ 0.74
TRIM13-208ENST00000478111 RILPL2Q969X0 211 aa19.66■□□□□ 0.74
TRIM13-208ENST00000478111 TIFAQ96CG3 184 aa19.66■□□□□ 0.74
TRIM13-208ENST00000478111 NOC4LQ9BVI4 516 aaKnown RBP19.66■□□□□ 0.74
TRIM13-208ENST00000478111 SEZ6LQ9BYH1 1024 aa19.66■□□□□ 0.74
TRIM13-208ENST00000478111 PTPDC1A2A3K4 754 aa19.65■□□□□ 0.74
TRIM13-208ENST00000478111 ZEB2O60315 1214 aa19.65■□□□□ 0.74
TRIM13-208ENST00000478111 SDSP20132 328 aa19.65■□□□□ 0.74
TRIM13-208ENST00000478111 B4GALNT3Q6L9W6 998 aa19.65■□□□□ 0.74
TRIM13-208ENST00000478111 PLEKHM2Q8IWE5 1019 aa19.65■□□□□ 0.74
TRIM13-208ENST00000478111 HERVK_113Q902F9 699 aa19.65■□□□□ 0.74
TRIM13-208ENST00000478111 VWCEQ96DN2 955 aa19.65■□□□□ 0.74
TRIM13-208ENST00000478111 WDR11Q9BZH6 1224 aa19.65■□□□□ 0.74
TRIM13-208ENST00000478111 WNT8AQ9H1J5 351 aa19.65■□□□□ 0.74
TRIM13-208ENST00000478111 HIPK3Q9H422 1215 aa19.65■□□□□ 0.74
TRIM13-208ENST00000478111 OSBPL3Q9H4L5 887 aa19.65■□□□□ 0.74
TRIM13-208ENST00000478111 CXXC1Q9P0U4 656 aaPredicted RBP19.65■□□□□ 0.74
TRIM13-208ENST00000478111 NEDD4P46934 1319 aa19.65■□□□□ 0.74
TRIM13-208ENST00000478111 MYH6P13533 1939 aa19.64■□□□□ 0.74
TRIM13-208ENST00000478111 EDNRBP24530 442 aa19.64■□□□□ 0.73
TRIM13-208ENST00000478111 CALML3P27482 149 aa19.64■□□□□ 0.73
TRIM13-208ENST00000478111 RPS6P62753 249 aaKnown RBP19.64■□□□□ 0.73
TRIM13-208ENST00000478111 RNF207Q6ZRF8 634 aa19.64■□□□□ 0.73
TRIM13-208ENST00000478111 WDR19Q8NEZ3 1342 aa19.64■□□□□ 0.73
TRIM13-208ENST00000478111 SCN5AQ14524 2016 aa19.64■□□□□ 0.73
TRIM13-208ENST00000478111 IGHDP01880 384 aa19.63■□□□□ 0.73
TRIM13-208ENST00000478111 CCL23P55773 120 aa19.63■□□□□ 0.73
TRIM13-208ENST00000478111 AAMPQ13685 434 aa19.63■□□□□ 0.73
TRIM13-208ENST00000478111 USP38Q8NB14 1042 aa19.63■□□□□ 0.73
TRIM13-208ENST00000478111 ZKSCAN3Q9BRR0 538 aa19.63■□□□□ 0.73
TRIM13-208ENST00000478111 ALDH8A1Q9H2A2 487 aaPredicted RBP19.63■□□□□ 0.73
TRIM13-208ENST00000478111 CPVLQ9H3G5 476 aa19.63■□□□□ 0.73
TRIM13-208ENST00000478111 FGBP02675 491 aa19.62■□□□□ 0.73
TRIM13-208ENST00000478111 GOLGA8HP0CJ92 632 aa19.62■□□□□ 0.73
TRIM13-208ENST00000478111 PURAQ00577 322 aaKnown RBP19.62■□□□□ 0.73
TRIM13-208ENST00000478111 CHD1LQ86WJ1 897 aa19.62■□□□□ 0.73
TRIM13-208ENST00000478111 DGKHQ86XP1 1220 aa19.62■□□□□ 0.73
TRIM13-208ENST00000478111 ESR2Q92731 530 aa19.62■□□□□ 0.73
TRIM13-208ENST00000478111 RNF41Q9H4P4 317 aaPredicted RBP19.62■□□□□ 0.73
TRIM13-208ENST00000478111 PNMA2Q9UL42 364 aa19.62■□□□□ 0.73
TRIM13-208ENST00000478111 KIAA1217Q5T5P2 1943 aa19.61■□□□□ 0.73
TRIM13-208ENST00000478111 MFAP1P55081 439 aaKnown RBP19.61■□□□□ 0.73
TRIM13-208ENST00000478111 NUCB1Q02818 461 aa19.61■□□□□ 0.73
TRIM13-208ENST00000478111 DNERQ8NFT8 737 aa19.61■□□□□ 0.73
TRIM13-208ENST00000478111 ANKS1AQ92625 1134 aa19.61■□□□□ 0.73
TRIM13-208ENST00000478111 UBA5Q9GZZ9 404 aa19.61■□□□□ 0.73
TRIM13-208ENST00000478111 RWDD1Q9H446 243 aaPredicted RBP19.61■□□□□ 0.73
TRIM13-208ENST00000478111 TRMT13Q9NUP7 481 aaKnown RBP19.61■□□□□ 0.73
TRIM13-208ENST00000478111 POLR3EQ9NVU0 708 aa19.61■□□□□ 0.73
TRIM13-208ENST00000478111 NCOR1O75376 2440 aa19.6■□□□□ 0.73
TRIM13-208ENST00000478111 ZNF213O14771 459 aa19.6■□□□□ 0.73
TRIM13-208ENST00000478111 CPT1AP50416 773 aa19.6■□□□□ 0.73
TRIM13-208ENST00000478111 GPATCH4Q5T3I0 446 aaKnown RBP19.6■□□□□ 0.73
TRIM13-208ENST00000478111 CWC27Q6UX04 472 aaKnown RBP19.6■□□□□ 0.73
TRIM13-208ENST00000478111 OTOP2Q7RTS6 562 aa19.6■□□□□ 0.73
TRIM13-208ENST00000478111 RGS22Q8NE09 1264 aa19.6■□□□□ 0.73
TRIM13-208ENST00000478111 TBC1D5Q92609 795 aa19.6■□□□□ 0.73
TRIM13-208ENST00000478111 COPS5Q92905 334 aa19.6■□□□□ 0.73
TRIM13-208ENST00000478111 TRIP12Q14669 1992 aaPredicted RBP19.6■□□□□ 0.73
TRIM13-208ENST00000478111 TET1Q8NFU7 2136 aa19.6■□□□□ 0.73
TRIM13-208ENST00000478111 A6NJR5 290 aa19.59■□□□□ 0.73
TRIM13-208ENST00000478111 KDM4AO75164 1064 aa19.59■□□□□ 0.73
TRIM13-208ENST00000478111 MYL3P08590 195 aa19.59■□□□□ 0.73
TRIM13-208ENST00000478111 PDE4DQ08499 809 aa19.59■□□□□ 0.73
TRIM13-208ENST00000478111 USH1GQ495M9 461 aa19.59■□□□□ 0.73
TRIM13-208ENST00000478111 PNMA1Q8ND90 353 aa19.59■□□□□ 0.73
TRIM13-208ENST00000478111 OR6J1Q8NGC5 347 aa19.59■□□□□ 0.73
TRIM13-208ENST00000478111 SCLYQ96I15 445 aa19.59■□□□□ 0.73
TRIM13-208ENST00000478111 YBX2Q9Y2T7 364 aaKnown RBP19.59■□□□□ 0.73
TRIM13-208ENST00000478111 BDP1A6H8Y1 2624 aa19.59■□□□□ 0.73
TRIM13-208ENST00000478111 XIRP2A4UGR9 3374 aa19.58■□□□□ 0.73
TRIM13-208ENST00000478111 TNKSO95271 1327 aa19.58■□□□□ 0.73
TRIM13-208ENST00000478111 NKRFO15226 690 aaKnown RBP eCLIP19.58■□□□□ 0.72
TRIM13-208ENST00000478111 ARIH2O95376 493 aa19.58■□□□□ 0.72
TRIM13-208ENST00000478111 CYP2C9P11712 490 aa19.58■□□□□ 0.72
TRIM13-208ENST00000478111 SCFD2Q8WU76 684 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms