RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 NBPF9Q3BBW0 867 aa4□□□□□ -1.77
CALD1-218ENST00000478075 LARP7Q4G0J3 582 aaKnown RBP eCLIP4□□□□□ -1.77
CALD1-218ENST00000478075 PRAMEF18Q5VWM3 479 aa4□□□□□ -1.77
CALD1-218ENST00000478075 TMC3Q7Z5M5 1100 aa4□□□□□ -1.77
CALD1-218ENST00000478075 PRIMA1Q86XR5 153 aa4□□□□□ -1.77
CALD1-218ENST00000478075 C1orf210Q8IVY1 113 aa4□□□□□ -1.77
CALD1-218ENST00000478075 NETO2Q8NC67 525 aa4□□□□□ -1.77
CALD1-218ENST00000478075 SPATA3Q8NHX4 192 aa4□□□□□ -1.77
CALD1-218ENST00000478075 EXTL1Q92935 676 aa4□□□□□ -1.77
CALD1-218ENST00000478075 SLC2A4RGQ9NR83 387 aa4□□□□□ -1.77
CALD1-218ENST00000478075 UPK3BL1B0FP48 263 aa3.99□□□□□ -1.77
CALD1-218ENST00000478075 UPK3BL2E5RIL1 263 aa3.99□□□□□ -1.77
CALD1-218ENST00000478075 ICMTO60725 284 aa3.99□□□□□ -1.77
CALD1-218ENST00000478075 RHOBTB3O94955 611 aa3.99□□□□□ -1.77
CALD1-218ENST00000478075 HOXB6P17509 224 aaKnown RBP3.99□□□□□ -1.77
CALD1-218ENST00000478075 COMTP21964 271 aa3.99□□□□□ -1.77
CALD1-218ENST00000478075 POU4F1Q01851 419 aa3.99□□□□□ -1.77
CALD1-218ENST00000478075 PRR31Q5SQ13 230 aa3.99□□□□□ -1.77
CALD1-218ENST00000478075 GRASPQ7Z6J2 395 aaPredicted RBP3.99□□□□□ -1.77
CALD1-218ENST00000478075 ZC3H18Q86VM9 953 aaKnown RBP3.99□□□□□ -1.77
CALD1-218ENST00000478075 CACTINQ8WUQ7 758 aaKnown RBP3.99□□□□□ -1.77
CALD1-218ENST00000478075 MIR1-1HGQ9H1L0 117 aa3.99□□□□□ -1.77
CALD1-218ENST00000478075 MEGF9Q9H1U4 602 aa3.99□□□□□ -1.77
CALD1-218ENST00000478075 MMRN2Q9H8L6 949 aa3.99□□□□□ -1.77
CALD1-218ENST00000478075 L2HGDHQ9H9P8 463 aa3.99□□□□□ -1.77
CALD1-218ENST00000478075 CHST7Q9NS84 486 aa3.99□□□□□ -1.77
CALD1-218ENST00000478075 AP5S1Q9NUS5 200 aa3.99□□□□□ -1.77
CALD1-218ENST00000478075 NUDT3O95989 172 aa3.98□□□□□ -1.77
CALD1-218ENST00000478075 GLI4P10075 376 aa3.98□□□□□ -1.77
CALD1-218ENST00000478075 CEBPAP49715 358 aaPredicted RBP3.98□□□□□ -1.77
CALD1-218ENST00000478075 RAD51AP2Q09MP3 1159 aa3.98□□□□□ -1.77
CALD1-218ENST00000478075 ZNF211Q13398 564 aaPredicted RBP3.98□□□□□ -1.77
CALD1-218ENST00000478075 GLYCTKQ8IVS8 523 aa3.98□□□□□ -1.77
CALD1-218ENST00000478075 MBD6Q96DN6 1003 aa3.98□□□□□ -1.77
CALD1-218ENST00000478075 AURKAIP1Q9NWT8 199 aaPredicted RBP3.98□□□□□ -1.77
CALD1-218ENST00000478075 FOXN1O15353 648 aa3.97□□□□□ -1.77
CALD1-218ENST00000478075 VAV1P15498 845 aa3.97□□□□□ -1.77
CALD1-218ENST00000478075 DGCR2P98153 550 aa3.97□□□□□ -1.77
CALD1-218ENST00000478075 KLHL36Q8N4N3 616 aa3.97□□□□□ -1.77
CALD1-218ENST00000478075 TMEM52Q8NDY8 209 aa3.97□□□□□ -1.77
CALD1-218ENST00000478075 PBXIP1Q96AQ6 731 aa3.97□□□□□ -1.77
CALD1-218ENST00000478075 TTPALQ9BTX7 342 aa3.97□□□□□ -1.77
CALD1-218ENST00000478075 BARX1Q9HBU1 254 aaPredicted RBP3.97□□□□□ -1.77
CALD1-218ENST00000478075 NGRNQ9NPE2 291 aaKnown RBP3.97□□□□□ -1.77
CALD1-218ENST00000478075 ANO2Q9NQ90 1003 aa3.97□□□□□ -1.77
CALD1-218ENST00000478075 B4GALT4O60513 344 aa3.96□□□□□ -1.78
CALD1-218ENST00000478075 ZNF28P17035 718 aa3.96□□□□□ -1.78
CALD1-218ENST00000478075 POU3F3P20264 500 aaPredicted RBP3.96□□□□□ -1.78
CALD1-218ENST00000478075 DNAJA1P31689 397 aaKnown RBP3.96□□□□□ -1.78
CALD1-218ENST00000478075 COL10A1Q03692 680 aa3.96□□□□□ -1.78
CALD1-218ENST00000478075 SEPT6Q14141 434 aa3.96□□□□□ -1.78
CALD1-218ENST00000478075 ETV3LQ6ZN32 361 aa3.96□□□□□ -1.78
CALD1-218ENST00000478075 FAM89AQ96GI7 184 aa3.96□□□□□ -1.78
CALD1-218ENST00000478075 YTHDC1Q96MU7 727 aaKnown RBP3.96□□□□□ -1.78
CALD1-218ENST00000478075 C8BP07358 591 aa3.95□□□□□ -1.78
CALD1-218ENST00000478075 SCRN1Q12765 414 aa3.95□□□□□ -1.78
CALD1-218ENST00000478075 COLEC12Q5KU26 742 aa3.95□□□□□ -1.78
CALD1-218ENST00000478075 TCTN3Q6NUS6 607 aa3.95□□□□□ -1.78
CALD1-218ENST00000478075 GIMAP8Q8ND71 665 aaPredicted RBP3.95□□□□□ -1.78
CALD1-218ENST00000478075 KRTAP4-4Q9BYR3 166 aa3.95□□□□□ -1.78
CALD1-218ENST00000478075 PRR13Q9NZ81 148 aa3.95□□□□□ -1.78
CALD1-218ENST00000478075 FOXS1O43638 330 aa3.94□□□□□ -1.78
CALD1-218ENST00000478075 C1SP09871 688 aa3.94□□□□□ -1.78
CALD1-218ENST00000478075 TACR1P25103 407 aa3.94□□□□□ -1.78
CALD1-218ENST00000478075 LCE1AQ5T7P2 110 aa3.94□□□□□ -1.78
CALD1-218ENST00000478075 RIOX1Q9H6W3 641 aa3.94□□□□□ -1.78
CALD1-218ENST00000478075 H3BRB1 525 aa3.93□□□□□ -1.78
CALD1-218ENST00000478075 RGS13O14921 159 aa3.93□□□□□ -1.78
CALD1-218ENST00000478075 TBC1D8O95759 1140 aa3.93□□□□□ -1.78
CALD1-218ENST00000478075 GSNP06396 782 aa3.93□□□□□ -1.78
CALD1-218ENST00000478075 L1CAMP32004 1257 aa3.93□□□□□ -1.78
CALD1-218ENST00000478075 ITGA1P56199 1179 aa3.93□□□□□ -1.78
CALD1-218ENST00000478075 ZNF627Q7L945 461 aa3.93□□□□□ -1.78
CALD1-218ENST00000478075 RETREG2Q8NC44 543 aa3.93□□□□□ -1.78
CALD1-218ENST00000478075 FBF1Q8TES7 1133 aa3.93□□□□□ -1.78
CALD1-218ENST00000478075 WRNIP1Q96S55 665 aa3.93□□□□□ -1.78
CALD1-218ENST00000478075 PTPN18Q99952 460 aa3.93□□□□□ -1.78
CALD1-218ENST00000478075 TUT1Q9H6E5 874 aaKnown RBP3.93□□□□□ -1.78
CALD1-218ENST00000478075 BCAS3Q9H6U6 928 aa3.93□□□□□ -1.78
CALD1-218ENST00000478075 FTSJ1Q9UET6 329 aa3.93□□□□□ -1.78
CALD1-218ENST00000478075 BPNT1O95861 308 aa3.92□□□□□ -1.78
CALD1-218ENST00000478075 MLECQ14165 292 aa3.92□□□□□ -1.78
CALD1-218ENST00000478075 NBPF12Q5TAG4 269 aaPredicted RBP3.92□□□□□ -1.78
CALD1-218ENST00000478075 AGBL4Q5VU57 503 aa3.92□□□□□ -1.78
CALD1-218ENST00000478075 LMF1Q96S06 567 aa3.92□□□□□ -1.78
CALD1-218ENST00000478075 PEX11BO96011 259 aa3.91□□□□□ -1.78
CALD1-218ENST00000478075 ACRV1P26436 265 aa3.91□□□□□ -1.78
CALD1-218ENST00000478075 ARHGAP4P98171 946 aa3.91□□□□□ -1.78
CALD1-218ENST00000478075 FNDC7Q5VTL7 733 aa3.91□□□□□ -1.78
CALD1-218ENST00000478075 CWF19L1Q69YN2 538 aaKnown RBP3.91□□□□□ -1.78
CALD1-218ENST00000478075 LAIR1Q6GTX8 287 aa3.91□□□□□ -1.78
CALD1-218ENST00000478075 AGMOQ6ZNB7 445 aa3.91□□□□□ -1.78
CALD1-218ENST00000478075 CLIP3Q96DZ5 547 aa3.91□□□□□ -1.78
CALD1-218ENST00000478075 KIF2CQ99661 725 aa3.91□□□□□ -1.78
CALD1-218ENST00000478075 ZNF703Q9H7S9 590 aaPredicted RBP3.91□□□□□ -1.78
CALD1-218ENST00000478075 FAM8A1Q9UBU6 413 aa3.91□□□□□ -1.78
CALD1-218ENST00000478075 KLHL3Q9UH77 587 aa3.91□□□□□ -1.78
CALD1-218ENST00000478075 REXO2Q9Y3B8 237 aaKnown RBP3.91□□□□□ -1.78
CALD1-218ENST00000478075 LMNAP02545 664 aaKnown RBP3.9□□□□□ -1.79
CALD1-218ENST00000478075 GSTM1P09488 218 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms