RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 PATL2C9JE40 543 aaKnown RBP5.52□□□□□ -1.53
PTCD3-212ENST00000477520 EIF1AYO14602 144 aaKnown RBP5.52□□□□□ -1.53
PTCD3-212ENST00000477520 NEFHP12036 1026 aa5.52□□□□□ -1.53
PTCD3-212ENST00000477520 ARNTP27540 789 aa5.52□□□□□ -1.53
PTCD3-212ENST00000477520 MAGEA9P43362 315 aa5.52□□□□□ -1.53
PTCD3-212ENST00000477520 GSCP56915 257 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-212ENST00000477520 TUBB4BP68371 445 aa5.52□□□□□ -1.53
PTCD3-212ENST00000477520 MVPQ14764 893 aaKnown RBP5.52□□□□□ -1.53
PTCD3-212ENST00000477520 EGFL6Q8IUX8 553 aa5.52□□□□□ -1.53
PTCD3-212ENST00000477520 CNPY4Q8N129 248 aa5.52□□□□□ -1.53
PTCD3-212ENST00000477520 MSL3Q8N5Y2 521 aaKnown RBP5.52□□□□□ -1.53
PTCD3-212ENST00000477520 EPS8L3Q8TE67 593 aaKnown RBP5.52□□□□□ -1.53
PTCD3-212ENST00000477520 PPM1EQ8WY54 764 aa5.52□□□□□ -1.53
PTCD3-212ENST00000477520 GCC1Q96CN9 775 aa5.52□□□□□ -1.53
PTCD3-212ENST00000477520 INTS4Q96HW7 963 aaKnown RBP5.52□□□□□ -1.53
PTCD3-212ENST00000477520 EPB41L4BQ9H329 900 aa5.52□□□□□ -1.53
PTCD3-212ENST00000477520 C19orf44Q9H6X5 657 aa5.52□□□□□ -1.53
PTCD3-212ENST00000477520 PRDM5Q9NQX1 630 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-212ENST00000477520 KCND1Q9NSA2 647 aa5.52□□□□□ -1.53
PTCD3-212ENST00000477520 CACNA2D2Q9NY47 1150 aa5.52□□□□□ -1.53
PTCD3-212ENST00000477520 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-212ENST00000477520 JRKLQ9Y4A0 524 aa5.52□□□□□ -1.53
PTCD3-212ENST00000477520 MSH6P52701 1360 aa5.52□□□□□ -1.53
PTCD3-212ENST00000477520 ROBO2Q9HCK4 1378 aa5.52□□□□□ -1.53
PTCD3-212ENST00000477520 SBNO2Q9Y2G9 1366 aa5.52□□□□□ -1.53
PTCD3-212ENST00000477520 ARHGEF28Q8N1W1 1705 aaKnown RBP5.51□□□□□ -1.53
PTCD3-212ENST00000477520 EVC2Q86UK5 1308 aa5.51□□□□□ -1.53
PTCD3-212ENST00000477520 ADAMTS20P59510 1910 aa5.51□□□□□ -1.53
PTCD3-212ENST00000477520 PPP1R12AO14974 1030 aaPredicted RBP5.51□□□□□ -1.53
PTCD3-212ENST00000477520 EPB41L2O43491 1005 aaKnown RBP5.51□□□□□ -1.53
PTCD3-212ENST00000477520 NUAK1O60285 661 aa5.51□□□□□ -1.53
PTCD3-212ENST00000477520 PRPF40AO75400 957 aaKnown RBP5.51□□□□□ -1.53
PTCD3-212ENST00000477520 RPS6KA5O75582 802 aa5.51□□□□□ -1.53
PTCD3-212ENST00000477520 ADCY5O95622 1261 aa5.51□□□□□ -1.53
PTCD3-212ENST00000477520 ZNF853P0CG23 659 aa5.51□□□□□ -1.53
PTCD3-212ENST00000477520 ATF3P18847 181 aa5.51□□□□□ -1.53
PTCD3-212ENST00000477520 ERCC3P19447 782 aa5.51□□□□□ -1.53
PTCD3-212ENST00000477520 ATP2B1P20020 1258 aa5.51□□□□□ -1.53
PTCD3-212ENST00000477520 GLDCP23378 1020 aa5.51□□□□□ -1.53
PTCD3-212ENST00000477520 FCGRTP55899 365 aa5.51□□□□□ -1.53
PTCD3-212ENST00000477520 LINC00310P59036 64 aa5.51□□□□□ -1.53
PTCD3-212ENST00000477520 PPP2R3AQ06190 1150 aa5.51□□□□□ -1.53
PTCD3-212ENST00000477520 RING1Q06587 406 aa5.51□□□□□ -1.53
PTCD3-212ENST00000477520 ZNF252P-AS1Q0IIN9 211 aa5.51□□□□□ -1.53
PTCD3-212ENST00000477520 SAFB2Q14151 953 aaKnown RBP eCLIP5.51□□□□□ -1.53
PTCD3-212ENST00000477520 ZRSR1Q15695 479 aaKnown RBP5.51□□□□□ -1.53
PTCD3-212ENST00000477520 ZKSCAN8Q15776 578 aaPredicted RBP5.51□□□□□ -1.53
PTCD3-212ENST00000477520 TTC31Q49AM3 519 aaPredicted RBP5.51□□□□□ -1.53
PTCD3-212ENST00000477520 CCDC183Q5T5S1 534 aa5.51□□□□□ -1.53
PTCD3-212ENST00000477520 CDKAL1Q5VV42 579 aa5.51□□□□□ -1.53
PTCD3-212ENST00000477520 ZKSCAN2Q63HK3 967 aa5.51□□□□□ -1.53
PTCD3-212ENST00000477520 CASC1Q6TDU7 716 aa5.51□□□□□ -1.53
PTCD3-212ENST00000477520 DTHD1Q6ZMT9 781 aa5.51□□□□□ -1.53
PTCD3-212ENST00000477520 WAPLQ7Z5K2 1190 aa5.51□□□□□ -1.53
PTCD3-212ENST00000477520 FILIP1Q7Z7B0 1213 aa5.51□□□□□ -1.53
PTCD3-212ENST00000477520 NPAS4Q8IUM7 802 aa5.51□□□□□ -1.53
PTCD3-212ENST00000477520 TMEM87AQ8NBN3 555 aa5.51□□□□□ -1.53
PTCD3-212ENST00000477520 FBXO18Q8NFZ0 1043 aa5.51□□□□□ -1.53
PTCD3-212ENST00000477520 EXOC4Q96A65 974 aa5.51□□□□□ -1.53
PTCD3-212ENST00000477520 PUS7Q96PZ0 661 aaKnown RBP5.51□□□□□ -1.53
PTCD3-212ENST00000477520 FAM129BQ96TA1 746 aa5.51□□□□□ -1.53
PTCD3-212ENST00000477520 SRRTQ9BXP5 876 aaKnown RBP5.51□□□□□ -1.53
PTCD3-212ENST00000477520 FOXQ1Q9C009 403 aa5.51□□□□□ -1.53
PTCD3-212ENST00000477520 MAPK8IP1Q9UQF2 711 aa5.51□□□□□ -1.53
PTCD3-212ENST00000477520 ATP6V1DQ9Y5K8 247 aa5.51□□□□□ -1.53
PTCD3-212ENST00000477520 TMEM94Q12767 1356 aa5.51□□□□□ -1.53
PTCD3-212ENST00000477520 DCCP43146 1447 aa5.5□□□□□ -1.53
PTCD3-212ENST00000477520 ADGRL3Q9HAR2 1447 aa5.5□□□□□ -1.53
PTCD3-212ENST00000477520 LOC102724159A0A0B4J2E5 919 aa5.5□□□□□ -1.53
PTCD3-212ENST00000477520 SYCE3A1L190 88 aa5.5□□□□□ -1.53
PTCD3-212ENST00000477520 TTC36A6NLP5 189 aa5.5□□□□□ -1.53
PTCD3-212ENST00000477520 DCDC2CA8MYV0 355 aa5.5□□□□□ -1.53
PTCD3-212ENST00000477520 H3BS24 57 aa5.5□□□□□ -1.53
PTCD3-212ENST00000477520 MYO1CO00159 1063 aa5.5□□□□□ -1.53
PTCD3-212ENST00000477520 IPO8O15397 1037 aaKnown RBP5.5□□□□□ -1.53
PTCD3-212ENST00000477520 ICMTO60725 284 aa5.5□□□□□ -1.53
PTCD3-212ENST00000477520 CPP00450 1065 aa5.5□□□□□ -1.53
PTCD3-212ENST00000477520 IGHA2P01877 340 aa5.5□□□□□ -1.53
PTCD3-212ENST00000477520 PPP2R1AP30153 589 aa5.5□□□□□ -1.53
PTCD3-212ENST00000477520 TDO2P48775 406 aa5.5□□□□□ -1.53
PTCD3-212ENST00000477520 RARSP54136 660 aaKnown RBP5.5□□□□□ -1.53
PTCD3-212ENST00000477520 ERVFC1P60507 584 aa5.5□□□□□ -1.53
PTCD3-212ENST00000477520 MAP2K1Q02750 393 aaPredicted RBP5.5□□□□□ -1.53
PTCD3-212ENST00000477520 NUCB1Q02818 461 aa5.5□□□□□ -1.53
PTCD3-212ENST00000477520 PWP2Q15269 919 aaKnown RBP5.5□□□□□ -1.53
PTCD3-212ENST00000477520 NBPF9Q3BBW0 867 aa5.5□□□□□ -1.53
PTCD3-212ENST00000477520 C12orf40Q86WS4 652 aa5.5□□□□□ -1.53
PTCD3-212ENST00000477520 STAG1Q8WVM7 1258 aa5.5□□□□□ -1.53
PTCD3-212ENST00000477520 RELTQ969Z4 430 aa5.5□□□□□ -1.53
PTCD3-212ENST00000477520 ZNF428Q96B54 188 aa5.5□□□□□ -1.53
PTCD3-212ENST00000477520 ALPK1Q96QP1 1244 aa5.5□□□□□ -1.53
PTCD3-212ENST00000477520 IRF2BPLQ9H1B7 796 aa5.5□□□□□ -1.53
PTCD3-212ENST00000477520 MTMR7Q9Y216 660 aa5.5□□□□□ -1.53
PTCD3-212ENST00000477520 CCDC9Q9Y3X0 531 aaKnown RBP5.5□□□□□ -1.53
PTCD3-212ENST00000477520 QRICH2Q9H0J4 1663 aa5.5□□□□□ -1.53
PTCD3-212ENST00000477520 LRRC7Q96NW7 1537 aa5.49□□□□□ -1.53
PTCD3-212ENST00000477520 GPR182O15218 404 aa5.49□□□□□ -1.53
PTCD3-212ENST00000477520 CCP110O43303 1012 aa5.49□□□□□ -1.53
PTCD3-212ENST00000477520 CDC45O75419 566 aa5.49□□□□□ -1.53
PTCD3-212ENST00000477520 BCAR3O75815 825 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms