RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 NRBP1Q9UHY1 535 aa15.16■□□□□ 0.02
TOP3A-205ENST00000477508 TPCN1Q9ULQ1 816 aa15.16■□□□□ 0.02
TOP3A-205ENST00000477508 V9GY48 417 aaPredicted RBP15.16■□□□□ 0.02
TOP3A-205ENST00000477508 CNTNAP5Q8WYK1 1306 aa15.16■□□□□ 0.02
TOP3A-205ENST00000477508 PTPDC1A2A3K4 754 aa15.15■□□□□ 0.02
TOP3A-205ENST00000477508 B4DLN1 442 aa15.15■□□□□ 0.02
TOP3A-205ENST00000477508 PFKFB2O60825 505 aa15.15■□□□□ 0.02
TOP3A-205ENST00000477508 CAPN2P17655 700 aa15.15■□□□□ 0.02
TOP3A-205ENST00000477508 MRPL12P52815 198 aaKnown RBP15.15■□□□□ 0.02
TOP3A-205ENST00000477508 RPS6P62753 249 aaKnown RBP15.15■□□□□ 0.02
TOP3A-205ENST00000477508 GHRHRQ02643 423 aa15.15■□□□□ 0.02
TOP3A-205ENST00000477508 CCL14Q16627 93 aa15.15■□□□□ 0.02
TOP3A-205ENST00000477508 MAMDC4Q6UXC1 1216 aa15.15■□□□□ 0.02
TOP3A-205ENST00000477508 TRIM22Q8IYM9 498 aa15.15■□□□□ 0.02
TOP3A-205ENST00000477508 DNERQ8NFT8 737 aa15.15■□□□□ 0.02
TOP3A-205ENST00000477508 TINF2Q9BSI4 451 aa15.15■□□□□ 0.02
TOP3A-205ENST00000477508 RNF26Q9BY78 433 aaPredicted RBP15.15■□□□□ 0.02
TOP3A-205ENST00000477508 LIMCH1Q9UPQ0 1083 aa15.15■□□□□ 0.02
TOP3A-205ENST00000477508 SYNGAP1Q96PV0 1343 aa15.15■□□□□ 0.02
TOP3A-205ENST00000477508 PLXNA1Q9UIW2 1896 aa15.14■□□□□ 0.01
TOP3A-205ENST00000477508 ASB14A6NK59 587 aa15.14■□□□□ 0.01
TOP3A-205ENST00000477508 PRPF3O43395 683 aaKnown RBP15.14■□□□□ 0.01
TOP3A-205ENST00000477508 IGHA2P01877 340 aa15.14■□□□□ 0.01
TOP3A-205ENST00000477508 NTRK3Q16288 839 aa15.14■□□□□ 0.01
TOP3A-205ENST00000477508 MAP3K21Q5TCX8 1036 aa15.14■□□□□ 0.01
TOP3A-205ENST00000477508 PPP1R18Q6NYC8 613 aa15.14■□□□□ 0.01
TOP3A-205ENST00000477508 ZSCAN31Q96LW9 406 aaPredicted RBP15.14■□□□□ 0.01
TOP3A-205ENST00000477508 LARP6Q9BRS8 491 aaKnown RBP15.14■□□□□ 0.01
TOP3A-205ENST00000477508 TMEM106CQ9BVX2 250 aa15.14■□□□□ 0.01
TOP3A-205ENST00000477508 GLT8D2Q9H1C3 349 aa15.14■□□□□ 0.01
TOP3A-205ENST00000477508 HMX1Q9NP08 348 aaPredicted RBP15.14■□□□□ 0.01
TOP3A-205ENST00000477508 RPTORQ8N122 1335 aa15.14■□□□□ 0.01
TOP3A-205ENST00000477508 GCOM1H8Y6P7 765 aaPredicted RBP15.13■□□□□ 0.01
TOP3A-205ENST00000477508 CFBP00751 764 aa15.13■□□□□ 0.01
TOP3A-205ENST00000477508 POLR2MP0CAP2 368 aa15.13■□□□□ 0.01
TOP3A-205ENST00000477508 PRKAR2AP13861 404 aaKnown RBP15.13■□□□□ 0.01
TOP3A-205ENST00000477508 TAL1P17542 331 aaPredicted RBP15.13■□□□□ 0.01
TOP3A-205ENST00000477508 CALML3P27482 149 aa15.13■□□□□ 0.01
TOP3A-205ENST00000477508 MCM2P49736 904 aa15.13■□□□□ 0.01
TOP3A-205ENST00000477508 HSD17B4P51659 736 aa15.13■□□□□ 0.01
TOP3A-205ENST00000477508 CNTN2Q02246 1040 aa15.13■□□□□ 0.01
TOP3A-205ENST00000477508 SSRP1Q08945 709 aaKnown RBP15.13■□□□□ 0.01
TOP3A-205ENST00000477508 STK3Q13188 491 aa15.13■□□□□ 0.01
TOP3A-205ENST00000477508 PFKFB3Q16875 520 aaPredicted RBP15.13■□□□□ 0.01
TOP3A-205ENST00000477508 HEATR3Q7Z4Q2 680 aa15.13■□□□□ 0.01
TOP3A-205ENST00000477508 CCDC12Q8WUD4 166 aaPredicted RBP15.13■□□□□ 0.01
TOP3A-205ENST00000477508 CUL5Q93034 780 aa15.13■□□□□ 0.01
TOP3A-205ENST00000477508 NCOA5Q9HCD5 579 aaKnown RBP15.13■□□□□ 0.01
TOP3A-205ENST00000477508 SH2B1Q9NRF2 756 aaPredicted RBP15.13■□□□□ 0.01
TOP3A-205ENST00000477508 FLRT1Q9NZU1 646 aa15.13■□□□□ 0.01
TOP3A-205ENST00000477508 CENPFP49454 3210 aa15.13■□□□□ 0.01
TOP3A-205ENST00000477508 SOWAHBA6NEL2 793 aa15.12■□□□□ 0.01
TOP3A-205ENST00000477508 CCL5P13501 91 aa15.12■□□□□ 0.01
TOP3A-205ENST00000477508 SCG2P13521 617 aa15.12■□□□□ 0.01
TOP3A-205ENST00000477508 CYP2C19P33261 490 aa15.12■□□□□ 0.01
TOP3A-205ENST00000477508 CACNB2Q08289 660 aaPredicted RBP15.12■□□□□ 0.01
TOP3A-205ENST00000477508 SCRN1Q12765 414 aa15.12■□□□□ 0.01
TOP3A-205ENST00000477508 SLC30A10Q6XR72 485 aa15.12■□□□□ 0.01
TOP3A-205ENST00000477508 FAM177A1Q8N128 213 aaPredicted RBP15.12■□□□□ 0.01
TOP3A-205ENST00000477508 SYTL5Q8TDW5 730 aaPredicted RBP15.12■□□□□ 0.01
TOP3A-205ENST00000477508 SLC26A6Q9BXS9 759 aa15.12■□□□□ 0.01
TOP3A-205ENST00000477508 BARHL2Q9NY43 387 aa15.12■□□□□ 0.01
TOP3A-205ENST00000477508 CNPY2Q9Y2B0 182 aa15.12■□□□□ 0.01
TOP3A-205ENST00000477508 RBBP6Q7Z6E9 1792 aaKnown RBP15.11■□□□□ 0.01
TOP3A-205ENST00000477508 hCG_1642624A0A1W2PR95 340 aa15.11■□□□□ 0.01
TOP3A-205ENST00000477508 PIK3CDO00329 1044 aa15.11■□□□□ 0.01
TOP3A-205ENST00000477508 OPLAHO14841 1288 aa15.11■□□□□ 0.01
TOP3A-205ENST00000477508 MSCO60682 206 aa15.11■□□□□ 0.01
TOP3A-205ENST00000477508 DEXIO95424 95 aa15.11■□□□□ 0.01
TOP3A-205ENST00000477508 GJB1P08034 283 aa15.11■□□□□ 0.01
TOP3A-205ENST00000477508 NAPAP54920 295 aa15.11■□□□□ 0.01
TOP3A-205ENST00000477508 ME3Q16798 604 aa15.11■□□□□ 0.01
TOP3A-205ENST00000477508 NSUN6Q8TEA1 469 aaKnown RBP15.11■□□□□ 0.01
TOP3A-205ENST00000477508 PHKBQ93100 1093 aa15.11■□□□□ 0.01
TOP3A-205ENST00000477508 GTF3C6Q969F1 213 aa15.11■□□□□ 0.01
TOP3A-205ENST00000477508 FGD4Q96M96 766 aa15.11■□□□□ 0.01
TOP3A-205ENST00000477508 IWS1Q96ST2 819 aa15.11■□□□□ 0.01
TOP3A-205ENST00000477508 RNF208Q9H0X6 261 aa15.11■□□□□ 0.01
TOP3A-205ENST00000477508 ABHD16BQ9H3Z7 469 aa15.11■□□□□ 0.01
TOP3A-205ENST00000477508 PSTPIP2Q9H939 334 aa15.11■□□□□ 0.01
TOP3A-205ENST00000477508 CCDC85CA6NKD9 419 aa15.1■□□□□ 0.01
TOP3A-205ENST00000477508 ALDH5A1P51649 535 aaPredicted RBP15.1■□□□□ 0.01
TOP3A-205ENST00000477508 WWC2Q6AWC2 1192 aa15.1■□□□□ 0.01
TOP3A-205ENST00000477508 MCTP2Q6DN12 878 aa15.1■□□□□ 0.01
TOP3A-205ENST00000477508 NOL8Q76FK4 1167 aaKnown RBP15.1■□□□□ 0.01
TOP3A-205ENST00000477508 ARMCX2Q7L311 632 aa15.1■□□□□ 0.01
TOP3A-205ENST00000477508 MORC4Q8TE76 937 aa15.1■□□□□ 0.01
TOP3A-205ENST00000477508 TBC1D5Q92609 795 aa15.1■□□□□ 0.01
TOP3A-205ENST00000477508 RMDN3Q96TC7 470 aa15.1■□□□□ 0.01
TOP3A-205ENST00000477508 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.1■□□□□ 0.01
TOP3A-205ENST00000477508 PAK6Q9NQU5 681 aaPredicted RBP15.1■□□□□ 0.01
TOP3A-205ENST00000477508 SH3GLB2Q9NR46 395 aa15.1■□□□□ 0.01
TOP3A-205ENST00000477508 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.1■□□□□ 0.01
TOP3A-205ENST00000477508 STK36Q9NRP7 1315 aa15.1■□□□□ 0.01
TOP3A-205ENST00000477508 KIAA0100Q14667 2235 aaKnown RBP15.09■□□□□ 0.01
TOP3A-205ENST00000477508 ESYT2A0FGR8 921 aa15.09■□□□□ 0.01
TOP3A-205ENST00000477508 STXBP3O00186 592 aa15.09■□□□□ 0.01
TOP3A-205ENST00000477508 SNAI1O95863 264 aaPredicted RBP15.09■□□□□ 0.01
TOP3A-205ENST00000477508 CYBAP13498 195 aa15.09■□□□□ 0.01
TOP3A-205ENST00000477508 PDE4DQ08499 809 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms