RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 FOSBP53539 338 aa18.31■□□□□ 0.52
COPS3-207ENST00000477299 TNS4Q8IZW8 715 aa18.31■□□□□ 0.52
COPS3-207ENST00000477299 RAET1EQ8TD07 263 aa18.31■□□□□ 0.52
COPS3-207ENST00000477299 SYTL5Q8TDW5 730 aaPredicted RBP18.31■□□□□ 0.52
COPS3-207ENST00000477299 TRIB2Q92519 343 aa18.31■□□□□ 0.52
COPS3-207ENST00000477299 TAAR1Q96RJ0 339 aa18.31■□□□□ 0.52
COPS3-207ENST00000477299 SH2B1Q9NRF2 756 aaPredicted RBP18.31■□□□□ 0.52
COPS3-207ENST00000477299 BARHL2Q9NY43 387 aa18.31■□□□□ 0.52
COPS3-207ENST00000477299 ORC3Q9UBD5 711 aaPredicted RBP18.31■□□□□ 0.52
COPS3-207ENST00000477299 POTEB2H3BUK9 544 aa18.3■□□□□ 0.52
COPS3-207ENST00000477299 MEIS2O14770 477 aa18.3■□□□□ 0.52
COPS3-207ENST00000477299 HOXC6P09630 235 aa18.3■□□□□ 0.52
COPS3-207ENST00000477299 NAPAP54920 295 aa18.3■□□□□ 0.52
COPS3-207ENST00000477299 AKAP17AQ02040 695 aaKnown RBP18.3■□□□□ 0.52
COPS3-207ENST00000477299 ARHGEF6Q15052 776 aa18.3■□□□□ 0.52
COPS3-207ENST00000477299 UBE2SQ16763 222 aa18.3■□□□□ 0.52
COPS3-207ENST00000477299 PRAMEF19Q5SWL8 479 aa18.3■□□□□ 0.52
COPS3-207ENST00000477299 CPLX2Q6PUV4 134 aaKnown RBP18.3■□□□□ 0.52
COPS3-207ENST00000477299 SMARCC2Q8TAQ2 1214 aa18.3■□□□□ 0.52
COPS3-207ENST00000477299 MAML3Q96JK9 1138 aa18.3■□□□□ 0.52
COPS3-207ENST00000477299 HTTP42858 3142 aa18.29■□□□□ 0.52
COPS3-207ENST00000477299 SMCO2A6NFE2 343 aa18.29■□□□□ 0.52
COPS3-207ENST00000477299 DEXIO95424 95 aa18.29■□□□□ 0.52
COPS3-207ENST00000477299 MYCP01106 439 aaPredicted RBP18.29■□□□□ 0.52
COPS3-207ENST00000477299 IGHA2P01877 340 aa18.29■□□□□ 0.52
COPS3-207ENST00000477299 CYP2C19P33261 490 aa18.29■□□□□ 0.52
COPS3-207ENST00000477299 HSD17B4P51659 736 aa18.29■□□□□ 0.52
COPS3-207ENST00000477299 IRF5Q13568 498 aa18.29■□□□□ 0.52
COPS3-207ENST00000477299 FBXO46Q6PJ61 603 aaPredicted RBP18.29■□□□□ 0.52
COPS3-207ENST00000477299 FCHSD1Q86WN1 690 aa18.29■□□□□ 0.52
COPS3-207ENST00000477299 TRIM22Q8IYM9 498 aa18.29■□□□□ 0.52
COPS3-207ENST00000477299 RGS22Q8NE09 1264 aa18.29■□□□□ 0.52
COPS3-207ENST00000477299 SOCS4Q8WXH5 440 aa18.29■□□□□ 0.52
COPS3-207ENST00000477299 ZFP91Q96JP5 570 aaPredicted RBP18.29■□□□□ 0.52
COPS3-207ENST00000477299 APBA2Q99767 749 aa18.29■□□□□ 0.52
COPS3-207ENST00000477299 TMEM260Q9NX78 707 aa18.29■□□□□ 0.52
COPS3-207ENST00000477299 PNMA2Q9UL42 364 aa18.29■□□□□ 0.52
COPS3-207ENST00000477299 LRRC37A2A6NM11 1700 aa18.29■□□□□ 0.52
COPS3-207ENST00000477299 MYH7BA7E2Y1 1941 aa18.28■□□□□ 0.52
COPS3-207ENST00000477299 CDKL5O76039 1030 aa18.28■□□□□ 0.52
COPS3-207ENST00000477299 PRMT2P55345 433 aa18.28■□□□□ 0.52
COPS3-207ENST00000477299 UBXN2AP68543 259 aa18.28■□□□□ 0.52
COPS3-207ENST00000477299 SNX21Q969T3 373 aa18.28■□□□□ 0.52
COPS3-207ENST00000477299 PGBD1Q96JS3 809 aa18.28■□□□□ 0.52
COPS3-207ENST00000477299 PSTPIP2Q9H939 334 aa18.28■□□□□ 0.52
COPS3-207ENST00000477299 FOXD4L1Q9NU39 408 aa18.28■□□□□ 0.52
COPS3-207ENST00000477299 KCNJ14Q9UNX9 436 aa18.28■□□□□ 0.52
COPS3-207ENST00000477299 PFASO15067 1338 aa18.27■□□□□ 0.52
COPS3-207ENST00000477299 STK36Q9NRP7 1315 aa18.27■□□□□ 0.52
COPS3-207ENST00000477299 GCOM1H8Y6P7 765 aaPredicted RBP18.27■□□□□ 0.52
COPS3-207ENST00000477299 POLR2MP0CAP2 368 aa18.27■□□□□ 0.52
COPS3-207ENST00000477299 XRCC5P13010 732 aaKnown RBP18.27■□□□□ 0.52
COPS3-207ENST00000477299 GRK4P32298 578 aa18.27■□□□□ 0.52
COPS3-207ENST00000477299 MCM2P49736 904 aa18.27■□□□□ 0.52
COPS3-207ENST00000477299 GHRHRQ02643 423 aa18.27■□□□□ 0.52
COPS3-207ENST00000477299 MCF2L2Q86YR7 1114 aa18.27■□□□□ 0.52
COPS3-207ENST00000477299 TRPV1Q8NER1 839 aa18.27■□□□□ 0.52
COPS3-207ENST00000477299 RASGRP4Q8TDF6 673 aa18.27■□□□□ 0.52
COPS3-207ENST00000477299 ALG1Q9BT22 464 aa18.27■□□□□ 0.52
COPS3-207ENST00000477299 KIAA1217Q5T5P2 1943 aa18.27■□□□□ 0.51
COPS3-207ENST00000477299 CENPFP49454 3210 aa18.26■□□□□ 0.51
COPS3-207ENST00000477299 SNAI1O95863 264 aaPredicted RBP18.26■□□□□ 0.51
COPS3-207ENST00000477299 CUL4AQ13619 759 aa18.26■□□□□ 0.51
COPS3-207ENST00000477299 MTFR1Q15390 333 aa18.26■□□□□ 0.51
COPS3-207ENST00000477299 NPY5RQ15761 445 aa18.26■□□□□ 0.51
COPS3-207ENST00000477299 IL31RAQ8NI17 732 aa18.26■□□□□ 0.51
COPS3-207ENST00000477299 LLPHQ9BRT6 129 aaKnown RBP18.26■□□□□ 0.51
COPS3-207ENST00000477299 RIC8AQ9NPQ8 531 aa18.26■□□□□ 0.51
COPS3-207ENST00000477299 BIN2Q9UBW5 565 aaPredicted RBP18.26■□□□□ 0.51
COPS3-207ENST00000477299 K7ELQ4 463 aaPredicted RBP18.25■□□□□ 0.51
COPS3-207ENST00000477299 EIF2AK2P19525 551 aaKnown RBP18.25■□□□□ 0.51
COPS3-207ENST00000477299 ALDH5A1P51649 535 aaPredicted RBP18.25■□□□□ 0.51
COPS3-207ENST00000477299 GUCY1B3Q02153 619 aa18.25■□□□□ 0.51
COPS3-207ENST00000477299 CACNB2Q08289 660 aaPredicted RBP18.25■□□□□ 0.51
COPS3-207ENST00000477299 TRAF1Q13077 416 aa18.25■□□□□ 0.51
COPS3-207ENST00000477299 JAKMIP3Q5VZ66 844 aa18.25■□□□□ 0.51
COPS3-207ENST00000477299 PXYLP1Q8TE99 480 aa18.25■□□□□ 0.51
COPS3-207ENST00000477299 TINF2Q9BSI4 451 aa18.25■□□□□ 0.51
COPS3-207ENST00000477299 ZMYND12Q9H0C1 365 aa18.25■□□□□ 0.51
COPS3-207ENST00000477299 RBM27Q9P2N5 1060 aaKnown RBP18.25■□□□□ 0.51
COPS3-207ENST00000477299 DIS3Q9Y2L1 958 aaKnown RBP18.25■□□□□ 0.51
COPS3-207ENST00000477299 DOCK5Q9H7D0 1870 aa18.24■□□□□ 0.51
COPS3-207ENST00000477299 hCG_1984214I3L0E3 225 aa18.24■□□□□ 0.51
COPS3-207ENST00000477299 INHAP05111 366 aa18.24■□□□□ 0.51
COPS3-207ENST00000477299 ADCY7P51828 1080 aa18.24■□□□□ 0.51
COPS3-207ENST00000477299 PKN2Q16513 984 aaKnown RBP18.24■□□□□ 0.51
COPS3-207ENST00000477299 SLC9C1Q4G0N8 1177 aa18.24■□□□□ 0.51
COPS3-207ENST00000477299 TMEM63BQ5T3F8 832 aa18.24■□□□□ 0.51
COPS3-207ENST00000477299 OLFML2BQ68BL8 750 aa18.24■□□□□ 0.51
COPS3-207ENST00000477299 ARMCX2Q7L311 632 aa18.24■□□□□ 0.51
COPS3-207ENST00000477299 EEPD1Q7L9B9 569 aa18.24■□□□□ 0.51
COPS3-207ENST00000477299 ZNF713Q8N859 430 aaPredicted RBP18.24■□□□□ 0.51
COPS3-207ENST00000477299 IL27Q8NEV9 243 aa18.24■□□□□ 0.51
COPS3-207ENST00000477299 OXER1Q8TDS5 423 aa18.24■□□□□ 0.51
COPS3-207ENST00000477299 RMDN3Q96TC7 470 aa18.24■□□□□ 0.51
COPS3-207ENST00000477299 PIK3CDO00329 1044 aa18.23■□□□□ 0.51
COPS3-207ENST00000477299 CAPN15O75808 1086 aa18.23■□□□□ 0.51
COPS3-207ENST00000477299 PTGS1P23219 599 aa18.23■□□□□ 0.51
COPS3-207ENST00000477299 GJB2P29033 226 aa18.23■□□□□ 0.51
COPS3-207ENST00000477299 CCND3P30281 292 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms