RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 NBPF12Q5TAG4 269 aaPredicted RBP7.73□□□□□ -1.17
CDKN1B-204ENST00000477087 LILRA2Q8N149 483 aa7.73□□□□□ -1.17
CDKN1B-204ENST00000477087 SYTL5Q8TDW5 730 aaPredicted RBP7.73□□□□□ -1.17
CDKN1B-204ENST00000477087 DIRC2Q96SL1 478 aa7.73□□□□□ -1.17
CDKN1B-204ENST00000477087 PPP1R16BQ96T49 567 aa7.73□□□□□ -1.17
CDKN1B-204ENST00000477087 POLR3GLQ9BT43 218 aa7.73□□□□□ -1.17
CDKN1B-204ENST00000477087 NSUN3Q9H649 340 aaKnown RBP7.73□□□□□ -1.17
CDKN1B-204ENST00000477087 FER1L4A9Z1Z3 1794 aa7.73□□□□□ -1.17
CDKN1B-204ENST00000477087 CGNL1Q0VF96 1302 aa7.73□□□□□ -1.17
CDKN1B-204ENST00000477087 NCOA3Q9Y6Q9 1424 aa7.72□□□□□ -1.17
CDKN1B-204ENST00000477087 NRXN3Q9Y4C0 1643 aa7.72□□□□□ -1.17
CDKN1B-204ENST00000477087 FITM1A5D6W6 292 aa7.72□□□□□ -1.17
CDKN1B-204ENST00000477087 MEIS3P2A8K0S8 358 aa7.72□□□□□ -1.17
CDKN1B-204ENST00000477087 NME1P15531 152 aaKnown RBP7.72□□□□□ -1.17
CDKN1B-204ENST00000477087 WAPLQ7Z5K2 1190 aa7.72□□□□□ -1.17
CDKN1B-204ENST00000477087 SPPL2CQ8IUH8 684 aa7.72□□□□□ -1.17
CDKN1B-204ENST00000477087 SLC26A8Q96RN1 970 aa7.72□□□□□ -1.17
CDKN1B-204ENST00000477087 HDAC8Q9BY41 377 aa7.72□□□□□ -1.17
CDKN1B-204ENST00000477087 PTPRUQ92729 1446 aa7.71□□□□□ -1.17
CDKN1B-204ENST00000477087 TEKQ02763 1124 aa7.71□□□□□ -1.18
CDKN1B-204ENST00000477087 NBPF9Q3BBW0 867 aa7.71□□□□□ -1.18
CDKN1B-204ENST00000477087 ZNF394Q53GI3 561 aa7.71□□□□□ -1.18
CDKN1B-204ENST00000477087 RNF111Q6ZNA4 994 aa7.71□□□□□ -1.18
CDKN1B-204ENST00000477087 HDGFL2Q7Z4V5 671 aaPredicted RBP7.71□□□□□ -1.18
CDKN1B-204ENST00000477087 NGEFQ8N5V2 710 aa7.71□□□□□ -1.18
CDKN1B-204ENST00000477087 DAGLBQ8NCG7 672 aa7.71□□□□□ -1.18
CDKN1B-204ENST00000477087 FBXO15Q8NCQ5 510 aaPredicted RBP7.71□□□□□ -1.18
CDKN1B-204ENST00000477087 BHLHE22Q8NFJ8 381 aaPredicted RBP7.71□□□□□ -1.18
CDKN1B-204ENST00000477087 ZNF512BQ96KM6 892 aaPredicted RBP7.71□□□□□ -1.18
CDKN1B-204ENST00000477087 FERD3LQ96RJ6 166 aa7.71□□□□□ -1.18
CDKN1B-204ENST00000477087 MKRN2Q9H000 416 aaKnown RBP7.71□□□□□ -1.18
CDKN1B-204ENST00000477087 EPB41L4BQ9H329 900 aa7.71□□□□□ -1.18
CDKN1B-204ENST00000477087 ANTXR1Q9H6X2 564 aa7.71□□□□□ -1.18
CDKN1B-204ENST00000477087 PCDHGB7Q9Y5F8 929 aa7.71□□□□□ -1.18
CDKN1B-204ENST00000477087 CPSF1Q10570 1443 aaKnown RBP7.7□□□□□ -1.18
CDKN1B-204ENST00000477087 CPS1P31327 1500 aa7.7□□□□□ -1.18
CDKN1B-204ENST00000477087 DBX1A6NMT0 343 aa7.7□□□□□ -1.18
CDKN1B-204ENST00000477087 TNFRSF10CO14798 259 aa7.7□□□□□ -1.18
CDKN1B-204ENST00000477087 IMPDH2P12268 514 aa7.7□□□□□ -1.18
CDKN1B-204ENST00000477087 PPP2R1AP30153 589 aa7.7□□□□□ -1.18
CDKN1B-204ENST00000477087 TRHRP34981 398 aaPredicted RBP7.7□□□□□ -1.18
CDKN1B-204ENST00000477087 PCBP3P57721 371 aaKnown RBP7.7□□□□□ -1.18
CDKN1B-204ENST00000477087 JAG1P78504 1218 aa7.7□□□□□ -1.18
CDKN1B-204ENST00000477087 CHRNEQ04844 493 aa7.7□□□□□ -1.18
CDKN1B-204ENST00000477087 SYDE1Q6ZW31 735 aaPredicted RBP7.7□□□□□ -1.18
CDKN1B-204ENST00000477087 TMC3Q7Z5M5 1100 aa7.7□□□□□ -1.18
CDKN1B-204ENST00000477087 ANKS4BQ8N8V4 417 aa7.7□□□□□ -1.18
CDKN1B-204ENST00000477087 SLC6A18Q96N87 628 aa7.7□□□□□ -1.18
CDKN1B-204ENST00000477087 PLEKHH1Q9ULM0 1364 aa7.7□□□□□ -1.18
CDKN1B-204ENST00000477087 NPHP4O75161 1426 aaPredicted RBP7.69□□□□□ -1.18
CDKN1B-204ENST00000477087 SETD1AO15047 1707 aaKnown RBP7.69□□□□□ -1.18
CDKN1B-204ENST00000477087 TULP4Q9NRJ4 1543 aa7.69□□□□□ -1.18
CDKN1B-204ENST00000477087 RPL10P27635 214 aaKnown RBP7.69□□□□□ -1.18
CDKN1B-204ENST00000477087 ZNF655Q8N720 491 aaPredicted RBP7.69□□□□□ -1.18
CDKN1B-204ENST00000477087 TCTN2Q96GX1 697 aa7.69□□□□□ -1.18
CDKN1B-204ENST00000477087 RNF32Q9H0A6 362 aa7.69□□□□□ -1.18
CDKN1B-204ENST00000477087 C19orf44Q9H6X5 657 aa7.69□□□□□ -1.18
CDKN1B-204ENST00000477087 DCP1AQ9NPI6 582 aaPredicted RBP7.69□□□□□ -1.18
CDKN1B-204ENST00000477087 ZMYM5Q9UJ78 669 aa7.69□□□□□ -1.18
CDKN1B-204ENST00000477087 FBXL21Q9UKT6 434 aa7.69□□□□□ -1.18
CDKN1B-204ENST00000477087 ZNF142P52746 1687 aaPredicted RBP7.69□□□□□ -1.18
CDKN1B-204ENST00000477087 POLR3AO14802 1390 aaPredicted RBP7.69□□□□□ -1.18
CDKN1B-204ENST00000477087 ATP7BP35670 1465 aa7.68□□□□□ -1.18
CDKN1B-204ENST00000477087 SCAMP3O14828 347 aaKnown RBP7.68□□□□□ -1.18
CDKN1B-204ENST00000477087 FYB1O15117 783 aa7.68□□□□□ -1.18
CDKN1B-204ENST00000477087 RAP1GAPP47736 663 aa7.68□□□□□ -1.18
CDKN1B-204ENST00000477087 SNW1Q13573 536 aaKnown RBP7.68□□□□□ -1.18
CDKN1B-204ENST00000477087 CCDC184Q52MB2 194 aa7.68□□□□□ -1.18
CDKN1B-204ENST00000477087 FBXW10Q5XX13 1052 aa7.68□□□□□ -1.18
CDKN1B-204ENST00000477087 TMEM192Q8IY95 271 aa7.68□□□□□ -1.18
CDKN1B-204ENST00000477087 USHBP1Q8N6Y0 703 aa7.68□□□□□ -1.18
CDKN1B-204ENST00000477087 FOXP3Q9BZS1 431 aa7.68□□□□□ -1.18
CDKN1B-204ENST00000477087 PRDM14Q9GZV8 571 aa7.68□□□□□ -1.18
CDKN1B-204ENST00000477087 SLC6A17Q9H1V8 727 aa7.68□□□□□ -1.18
CDKN1B-204ENST00000477087 CWC22Q9HCG8 908 aaKnown RBP7.68□□□□□ -1.18
CDKN1B-204ENST00000477087 GPR160Q9UJ42 338 aa7.68□□□□□ -1.18
CDKN1B-204ENST00000477087 TCFL5Q9UL49 500 aa7.68□□□□□ -1.18
CDKN1B-204ENST00000477087 ZNRF3Q9ULT6 936 aa7.68□□□□□ -1.18
CDKN1B-204ENST00000477087 PCDHB12Q9Y5F1 795 aa7.68□□□□□ -1.18
CDKN1B-204ENST00000477087 ARHGEF28Q8N1W1 1705 aaKnown RBP7.68□□□□□ -1.18
CDKN1B-204ENST00000477087 MYO5BQ9ULV0 1848 aa7.68□□□□□ -1.18
CDKN1B-204ENST00000477087 ANKARQ7Z5J8 1434 aa7.68□□□□□ -1.18
CDKN1B-204ENST00000477087 RIMS1Q86UR5 1692 aaKnown RBP7.67□□□□□ -1.18
CDKN1B-204ENST00000477087 KNDC1Q76NI1 1749 aa7.67□□□□□ -1.18
CDKN1B-204ENST00000477087 FAM86C2PA6NEL3 165 aa7.67□□□□□ -1.18
CDKN1B-204ENST00000477087 SIGLEC6O43699 453 aa7.67□□□□□ -1.18
CDKN1B-204ENST00000477087 PRAMEF1O95521 474 aa7.67□□□□□ -1.18
CDKN1B-204ENST00000477087 RECKO95980 971 aa7.67□□□□□ -1.18
CDKN1B-204ENST00000477087 SYPP08247 313 aa7.67□□□□□ -1.18
CDKN1B-204ENST00000477087 VAMP1P23763 118 aa7.67□□□□□ -1.18
CDKN1B-204ENST00000477087 NR0B2Q15466 257 aa7.67□□□□□ -1.18
CDKN1B-204ENST00000477087 CC2D1BQ5T0F9 858 aaKnown RBP7.67□□□□□ -1.18
CDKN1B-204ENST00000477087 DHRS1Q96LJ7 313 aa7.67□□□□□ -1.18
CDKN1B-204ENST00000477087 SLC9A7Q96T83 725 aa7.67□□□□□ -1.18
CDKN1B-204ENST00000477087 CHST7Q9NS84 486 aa7.67□□□□□ -1.18
CDKN1B-204ENST00000477087 CD163L1Q9NR16 1453 aa7.67□□□□□ -1.18
CDKN1B-204ENST00000477087 ADGRB2O60241 1585 aa7.67□□□□□ -1.18
CDKN1B-204ENST00000477087 NFIBO00712 420 aa7.66□□□□□ -1.18
CDKN1B-204ENST00000477087 SAFB2Q14151 953 aaKnown RBP eCLIP7.66□□□□□ -1.18
CDKN1B-204ENST00000477087 INTS3Q68E01 1043 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms