RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 GJB2P29033 226 aa20.37■□□□□ 0.85
SREBF1-211ENST00000476994 SNAP25P60880 206 aa20.37■□□□□ 0.85
SREBF1-211ENST00000476994 IKQ13123 557 aaPredicted RBP20.37■□□□□ 0.85
SREBF1-211ENST00000476994 PFKFB3Q16875 520 aaPredicted RBP20.37■□□□□ 0.85
SREBF1-211ENST00000476994 FOXD4L1Q9NU39 408 aa20.37■□□□□ 0.85
SREBF1-211ENST00000476994 PNMA6FA0A0J9YX94 578 aa20.36■□□□□ 0.85
SREBF1-211ENST00000476994 CNMDO75829 334 aa20.36■□□□□ 0.85
SREBF1-211ENST00000476994 FDX1P10109 184 aa20.36■□□□□ 0.85
SREBF1-211ENST00000476994 PTPREP23469 700 aa20.36■□□□□ 0.85
SREBF1-211ENST00000476994 CCL14Q16627 93 aa20.36■□□□□ 0.85
SREBF1-211ENST00000476994 TYW1BQ6NUM6 668 aa20.36■□□□□ 0.85
SREBF1-211ENST00000476994 HOMER1Q86YM7 354 aa20.36■□□□□ 0.85
SREBF1-211ENST00000476994 TRIM22Q8IYM9 498 aa20.36■□□□□ 0.85
SREBF1-211ENST00000476994 PIBF1Q8WXW3 757 aa20.36■□□□□ 0.85
SREBF1-211ENST00000476994 RRP36Q96EU6 259 aaKnown RBP20.36■□□□□ 0.85
SREBF1-211ENST00000476994 IPO9Q96P70 1041 aaKnown RBP20.36■□□□□ 0.85
SREBF1-211ENST00000476994 PRO3102Q9H379 93 aa20.36■□□□□ 0.85
SREBF1-211ENST00000476994 SMC3Q9UQE7 1217 aa20.36■□□□□ 0.85
SREBF1-211ENST00000476994 MYH15Q9Y2K3 1946 aa20.35■□□□□ 0.85
SREBF1-211ENST00000476994 MSCO60682 206 aa20.35■□□□□ 0.85
SREBF1-211ENST00000476994 SCG2P13521 617 aa20.35■□□□□ 0.85
SREBF1-211ENST00000476994 DDIT3P35638 169 aa20.35■□□□□ 0.85
SREBF1-211ENST00000476994 MB21D1Q8N884 522 aa20.35■□□□□ 0.85
SREBF1-211ENST00000476994 SPRYD3Q8NCJ5 442 aa20.35■□□□□ 0.85
SREBF1-211ENST00000476994 SLC5A4Q9NY91 659 aa20.35■□□□□ 0.85
SREBF1-211ENST00000476994 ZNF214Q9UL59 606 aaPredicted RBP20.35■□□□□ 0.85
SREBF1-211ENST00000476994 ATP2A1O14983 1001 aa20.34■□□□□ 0.85
SREBF1-211ENST00000476994 STRNO43815 780 aa20.34■□□□□ 0.85
SREBF1-211ENST00000476994 TAL1P17542 331 aaPredicted RBP20.34■□□□□ 0.85
SREBF1-211ENST00000476994 CNGA1P29973 690 aa20.34■□□□□ 0.85
SREBF1-211ENST00000476994 CCND3P30281 292 aaPredicted RBP20.34■□□□□ 0.85
SREBF1-211ENST00000476994 WWC2Q6AWC2 1192 aa20.34■□□□□ 0.85
SREBF1-211ENST00000476994 DPP9Q86TI2 863 aa20.34■□□□□ 0.85
SREBF1-211ENST00000476994 BTBD7Q9P203 1132 aa20.34■□□□□ 0.85
SREBF1-211ENST00000476994 ZMYND8Q9ULU4 1186 aaPredicted RBP20.34■□□□□ 0.85
SREBF1-211ENST00000476994 ZNF236Q9UL36 1845 aa20.33■□□□□ 0.85
SREBF1-211ENST00000476994 STXBP3O00186 592 aa20.33■□□□□ 0.85
SREBF1-211ENST00000476994 ICAM1P05362 532 aa20.33■□□□□ 0.85
SREBF1-211ENST00000476994 OAZ1P54368 228 aa20.33■□□□□ 0.85
SREBF1-211ENST00000476994 GRB14Q14449 540 aa20.33■□□□□ 0.85
SREBF1-211ENST00000476994 TMEM132BQ14DG7 1078 aa20.33■□□□□ 0.85
SREBF1-211ENST00000476994 SAMD1Q6SPF0 538 aaPredicted RBP20.33■□□□□ 0.85
SREBF1-211ENST00000476994 GPKOWQ92917 476 aaPredicted RBP eCLIP20.33■□□□□ 0.857e-6■□□□□ 8.1
SREBF1-211ENST00000476994 HOXC6P09630 235 aa20.32■□□□□ 0.84
SREBF1-211ENST00000476994 AKAP17AQ02040 695 aaKnown RBP20.32■□□□□ 0.84
SREBF1-211ENST00000476994 PLS1Q14651 629 aa20.32■□□□□ 0.84
SREBF1-211ENST00000476994 CCDC174Q6PII3 467 aa20.32■□□□□ 0.84
SREBF1-211ENST00000476994 SHCBP1Q8NEM2 672 aa20.32■□□□□ 0.84
SREBF1-211ENST00000476994 ALG1Q9BT22 464 aa20.32■□□□□ 0.84
SREBF1-211ENST00000476994 GJB4Q9NTQ9 266 aa20.32■□□□□ 0.84
SREBF1-211ENST00000476994 BARHL2Q9NY43 387 aa20.32■□□□□ 0.84
SREBF1-211ENST00000476994 SEC63Q9UGP8 760 aaKnown RBP20.32■□□□□ 0.84
SREBF1-211ENST00000476994 MYH7BA7E2Y1 1941 aa20.31■□□□□ 0.84
SREBF1-211ENST00000476994 SZT2Q5T011 3432 aa20.31■□□□□ 0.84
SREBF1-211ENST00000476994 hCG_1984214I3L0E3 225 aa20.31■□□□□ 0.84
SREBF1-211ENST00000476994 ZBED4O75132 1171 aa20.31■□□□□ 0.84
SREBF1-211ENST00000476994 BMP8BP34820 402 aa20.31■□□□□ 0.84
SREBF1-211ENST00000476994 MNX1P50219 401 aaPredicted RBP20.31■□□□□ 0.84
SREBF1-211ENST00000476994 NPY5RQ15761 445 aa20.31■□□□□ 0.84
SREBF1-211ENST00000476994 FBXO11Q86XK2 927 aa20.31■□□□□ 0.84
SREBF1-211ENST00000476994 ZNF713Q8N859 430 aaPredicted RBP20.31■□□□□ 0.84
SREBF1-211ENST00000476994 AGBL1Q96MI9 1066 aa20.31■□□□□ 0.84
SREBF1-211ENST00000476994 AMNQ9BXJ7 453 aa20.31■□□□□ 0.84
SREBF1-211ENST00000476994 SPATC1LQ9H0A9 340 aa20.31■□□□□ 0.84
SREBF1-211ENST00000476994 MROH8Q9H579 483 aa20.31■□□□□ 0.84
SREBF1-211ENST00000476994 RAVER2Q9HCJ3 691 aaKnown RBP20.31■□□□□ 0.84
SREBF1-211ENST00000476994 PLXNA1Q9UIW2 1896 aa20.3■□□□□ 0.84
SREBF1-211ENST00000476994 OPLAHO14841 1288 aa20.3■□□□□ 0.84
SREBF1-211ENST00000476994 HSP90AA1P07900 732 aaKnown RBP20.3■□□□□ 0.84
SREBF1-211ENST00000476994 LHX8Q68G74 356 aa20.3■□□□□ 0.84
SREBF1-211ENST00000476994 HEATR3Q7Z4Q2 680 aa20.3■□□□□ 0.84
SREBF1-211ENST00000476994 RGS22Q8NE09 1264 aa20.3■□□□□ 0.84
SREBF1-211ENST00000476994 WASF1Q92558 559 aa20.3■□□□□ 0.84
SREBF1-211ENST00000476994 GDF15Q99988 308 aa20.3■□□□□ 0.84
SREBF1-211ENST00000476994 MOV10L1Q9BXT6 1211 aaKnown RBP20.3■□□□□ 0.84
SREBF1-211ENST00000476994 SH3GLB2Q9NR46 395 aa20.3■□□□□ 0.84
SREBF1-211ENST00000476994 VPS54Q9P1Q0 977 aa20.3■□□□□ 0.84
SREBF1-211ENST00000476994 DDX20Q9UHI6 824 aaKnown RBP20.3■□□□□ 0.84
SREBF1-211ENST00000476994 RIPK3Q9Y572 518 aa20.3■□□□□ 0.84
SREBF1-211ENST00000476994 TCHHQ07283 1943 aa20.29■□□□□ 0.84
SREBF1-211ENST00000476994 SYN1P17600 705 aa20.29■□□□□ 0.84
SREBF1-211ENST00000476994 PPP1R18Q6NYC8 613 aa20.29■□□□□ 0.84
SREBF1-211ENST00000476994 NCAPG2Q86XI2 1143 aa20.29■□□□□ 0.84
SREBF1-211ENST00000476994 CPXCR1Q8N123 301 aa20.29■□□□□ 0.84
SREBF1-211ENST00000476994 FAM177A1Q8N128 213 aaPredicted RBP20.29■□□□□ 0.84
SREBF1-211ENST00000476994 FAM184AQ8NB25 1140 aa20.29■□□□□ 0.84
SREBF1-211ENST00000476994 TEX13BQ9BXU2 312 aa20.29■□□□□ 0.84
SREBF1-211ENST00000476994 PFASO15067 1338 aa20.28■□□□□ 0.84
SREBF1-211ENST00000476994 ESYT2A0FGR8 921 aa20.28■□□□□ 0.84
SREBF1-211ENST00000476994 ADAMTS3O15072 1205 aa20.28■□□□□ 0.84
SREBF1-211ENST00000476994 COL6A1P12109 1028 aa20.28■□□□□ 0.84
SREBF1-211ENST00000476994 ERCC3P19447 782 aa20.28■□□□□ 0.84
SREBF1-211ENST00000476994 SYT1P21579 422 aa20.28■□□□□ 0.84
SREBF1-211ENST00000476994 ADORA2AP29274 412 aa20.28■□□□□ 0.84
SREBF1-211ENST00000476994 USH1GQ495M9 461 aa20.28■□□□□ 0.84
SREBF1-211ENST00000476994 RIOX2Q8IUF8 465 aa20.28■□□□□ 0.84
SREBF1-211ENST00000476994 FBXO18Q8NFZ0 1043 aa20.28■□□□□ 0.84
SREBF1-211ENST00000476994 CLEC4DQ8WXI8 215 aa20.28■□□□□ 0.84
SREBF1-211ENST00000476994 PHF20Q9BVI0 1012 aa20.28■□□□□ 0.84
SREBF1-211ENST00000476994 FLRT1Q9NZU1 646 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms