RNA–Protein interactions for RNA: ENST00000476961.5

CNTNAP3B-205, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 2,643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-205ENST00000476961 CNGA3Q16281 694 aa9.19□□□□□ -0.94
CNTNAP3B-205ENST00000476961 WHAMMP3Q1A5X7 153 aa9.19□□□□□ -0.94
CNTNAP3B-205ENST00000476961 SHROOM1Q2M3G4 852 aaPredicted RBP9.19□□□□□ -0.94
CNTNAP3B-205ENST00000476961 RABL6Q3YEC7 729 aaPredicted RBP9.19□□□□□ -0.94
CNTNAP3B-205ENST00000476961 PPP1R14BQ96C90 147 aa9.19□□□□□ -0.94
CNTNAP3B-205ENST00000476961 VMP1Q96GC9 406 aa9.19□□□□□ -0.94
CNTNAP3B-205ENST00000476961 NAT10Q9H0A0 1025 aaKnown RBP9.19□□□□□ -0.94
CNTNAP3B-205ENST00000476961 LY75O60449 1722 aa9.19□□□□□ -0.94
CNTNAP3B-205ENST00000476961 TRIM43BA6NCK2 446 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 SURF6O75683 361 aaKnown RBP9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 SYF2O95926 243 aaKnown RBP9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 TROVE2P10155 538 aaKnown RBP eCLIP9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 HSPA8P11142 646 aaKnown RBP9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 ATICP31939 592 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 MLH1P40692 756 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 USH1GQ495M9 461 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 BMP2KLQ5H9B9 411 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 SMIM5Q71RC9 77 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 NLRP10Q86W26 655 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 DCLK2Q8N568 766 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 CCDC155Q8N6L0 562 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 DEPTORQ8TB45 409 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 OTUD7AQ8TE49 926 aaPredicted RBP9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 CARD8Q9Y2G2 431 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 L3MBTL1Q9Y468 752 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 GOLGA6L7A0A1B0GV03 622 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 TARSL2A2RTX5 802 aaKnown RBP9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 HTR3EA5X5Y0 456 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 FANCGO15287 622 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 LUC7L3O95232 432 aaKnown RBP9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 MYBL1P10243 752 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 FOXO4P98177 505 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 GSTM4Q03013 218 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 ITGA7Q13683 1181 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 CCDC152Q4G0S7 254 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 SPDYCQ5MJ68 293 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 CRELD2Q6UXH1 353 aaPredicted RBP9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 PALB2Q86YC2 1186 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 ZNF34Q8IZ26 560 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 GOLGA1Q92805 767 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 CNKSR1Q969H4 720 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 ZMAT2Q96NC0 199 aaKnown RBP9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 SRPK1Q96SB4 655 aaKnown RBP9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 VCX3BQ9H321 246 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 AASDHPPTQ9NRN7 309 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 INIPQ9NRY2 104 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 LRRC4BQ9NT99 713 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 SLC5A4Q9NY91 659 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 PA2G4Q9UQ80 394 aaKnown RBP9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 SH3GLB1Q9Y371 365 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 DPPA5A6NC42 116 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 GOLGA6L4A6NEF3 574 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 LRP8Q14114 963 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 POTEEQ6S8J3 1075 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 MAATS1Q7Z4T9 603 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 ZNF804AQ7Z570 1209 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 AMIGO3Q86WK7 504 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 ERICH1Q86X53 443 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 TRIM50Q86XT4 487 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 PLEKHM2Q8IWE5 1019 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 IGSF22Q8N9C0 903 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 KRI1Q8N9T8 703 aaKnown RBP9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 CEP295NLQ96MC4 621 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 NDNQ99608 321 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 UPF3BQ9BZI7 483 aaKnown RBP9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 CBX8Q9HC52 389 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 RHBDL2Q9NX52 303 aa9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 R3HDM2Q9Y2K5 976 aaKnown RBP9.18□□□□□ -0.94
CNTNAP3B-205ENST00000476961 UBN2Q6ZU65 1347 aa9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 NDUFAB1O14561 156 aa9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 MAP3K13O43283 966 aa9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 RPS6KA4O75676 772 aa9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 PCCAP05165 728 aaPredicted RBP9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 SSBP05455 408 aaKnown RBP eCLIP9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 PPP2R3AQ06190 1150 aa9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 ZNF362Q5T0B9 420 aaPredicted RBP9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 TRIM65Q6PJ69 517 aa9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 ABHD8Q96I13 439 aa9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 EHD4Q9H223 541 aa9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 ACTR5Q9H9F9 607 aaPredicted RBP9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 MAP3K20Q9NYL2 800 aaKnown RBP9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 CIDEBQ9UHD4 219 aa9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 KLF15Q9UIH9 416 aa9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 LRRD1A4D1F6 860 aa9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 ABLIM1O14639 778 aa9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 GNPATO15228 680 aa9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 SUPT3HO75486 399 aa9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 ANP32DO95626 131 aa9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 RFX5P48382 616 aaPredicted RBP9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 CYP4A11Q02928 519 aa9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 PPP2R5BQ15173 497 aa9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 LMBR1LQ6UX01 489 aa9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 MYPNQ86TC9 1320 aa9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 LMNTD2Q8IXW0 634 aa9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 SYNE4Q8N205 404 aa9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 TTC39CQ8N584 583 aa9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 ZBTB38Q8NAP3 1195 aaPredicted RBP9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 SH3TC1Q8TE82 1336 aa9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 LEO1Q8WVC0 666 aaPredicted RBP9.17□□□□□ -0.94
CNTNAP3B-205ENST00000476961 FAM89AQ96GI7 184 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms