RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 NFKBIEO00221 500 aa18.48■□□□□ 0.55
TMEM53-208ENST00000476724 GYPCP04921 128 aa18.48■□□□□ 0.55
TMEM53-208ENST00000476724 H2AFXP16104 143 aaPredicted RBP18.48■□□□□ 0.55
TMEM53-208ENST00000476724 MAP3K9P80192 1104 aa18.48■□□□□ 0.55
TMEM53-208ENST00000476724 CLEC10AQ8IUN9 316 aa18.48■□□□□ 0.55
TMEM53-208ENST00000476724 NIM1KQ8IY84 436 aa18.48■□□□□ 0.55
TMEM53-208ENST00000476724 CPLX3Q8WVH0 158 aa18.48■□□□□ 0.55
TMEM53-208ENST00000476724 THAP9Q9H5L6 903 aa18.48■□□□□ 0.55
TMEM53-208ENST00000476724 ZNRF3Q9ULT6 936 aa18.48■□□□□ 0.55
TMEM53-208ENST00000476724 GDAQ9Y2T3 454 aa18.48■□□□□ 0.55
TMEM53-208ENST00000476724 SOWAHDA6NJG2 315 aa18.47■□□□□ 0.55
TMEM53-208ENST00000476724 SPDYE4A6NLX3 237 aa18.47■□□□□ 0.55
TMEM53-208ENST00000476724 PSMA7O14818 248 aa18.47■□□□□ 0.55
TMEM53-208ENST00000476724 KLRC4O43908 158 aa18.47■□□□□ 0.55
TMEM53-208ENST00000476724 EEF1GP26641 437 aaKnown RBP18.47■□□□□ 0.55
TMEM53-208ENST00000476724 CCT6AP40227 531 aaKnown RBP18.47■□□□□ 0.55
TMEM53-208ENST00000476724 ASPRV1Q53RT3 343 aa18.47■□□□□ 0.55
TMEM53-208ENST00000476724 CABP7Q86V35 215 aa18.47■□□□□ 0.55
TMEM53-208ENST00000476724 GIMAP8Q8ND71 665 aaPredicted RBP18.47■□□□□ 0.55
TMEM53-208ENST00000476724 VPS33BQ9H267 617 aa18.47■□□□□ 0.55
TMEM53-208ENST00000476724 TAOK3Q9H2K8 898 aa18.47■□□□□ 0.55
TMEM53-208ENST00000476724 BCS1LQ9Y276 419 aa18.47■□□□□ 0.55
TMEM53-208ENST00000476724 MYO3BQ8WXR4 1341 aa18.47■□□□□ 0.55
TMEM53-208ENST00000476724 GREB1LQ9C091 1923 aaPredicted RBP18.46■□□□□ 0.55
TMEM53-208ENST00000476724 FANCGO15287 622 aa18.46■□□□□ 0.55
TMEM53-208ENST00000476724 CCNT1O60563 726 aaKnown RBP18.46■□□□□ 0.55
TMEM53-208ENST00000476724 HLA-DOAP06340 250 aa18.46■□□□□ 0.55
TMEM53-208ENST00000476724 AMPD3Q01432 767 aa18.46■□□□□ 0.55
TMEM53-208ENST00000476724 LETM2Q2VYF4 491 aa18.46■□□□□ 0.55
TMEM53-208ENST00000476724 DHTKD1Q96HY7 919 aaPredicted RBP18.46■□□□□ 0.55
TMEM53-208ENST00000476724 VPS16Q9H269 839 aa18.46■□□□□ 0.55
TMEM53-208ENST00000476724 SWAP70Q9UH65 585 aa18.46■□□□□ 0.55
TMEM53-208ENST00000476724 CD2APQ9Y5K6 639 aa18.46■□□□□ 0.55
TMEM53-208ENST00000476724 PP2D1A8MPX8 630 aa18.46■□□□□ 0.55
TMEM53-208ENST00000476724 RAD9BQ6WBX8 426 aa18.46■□□□□ 0.55
TMEM53-208ENST00000476724 REXO1Q8N1G1 1221 aaKnown RBP18.46■□□□□ 0.55
TMEM53-208ENST00000476724 WDR24Q96S15 920 aa18.46■□□□□ 0.55
TMEM53-208ENST00000476724 PIGSQ96S52 555 aa18.46■□□□□ 0.55
TMEM53-208ENST00000476724 MTMR4Q9NYA4 1195 aa18.46■□□□□ 0.55
TMEM53-208ENST00000476724 FXR1P51114 621 aaKnown RBP eCLIP18.45■□□□□ 0.54
TMEM53-208ENST00000476724 EIF6P56537 245 aaKnown RBP18.45■□□□□ 0.54
TMEM53-208ENST00000476724 CXCL9Q07325 125 aa18.45■□□□□ 0.54
TMEM53-208ENST00000476724 NLGN2Q8NFZ4 835 aa18.45■□□□□ 0.54
TMEM53-208ENST00000476724 KIFC2Q96AC6 838 aa18.45■□□□□ 0.54
TMEM53-208ENST00000476724 DESI2Q9BSY9 194 aa18.45■□□□□ 0.54
TMEM53-208ENST00000476724 ARGLU1Q9NWB6 273 aaPredicted RBP18.45■□□□□ 0.54
TMEM53-208ENST00000476724 TAB2Q9NYJ8 693 aa18.45■□□□□ 0.54
TMEM53-208ENST00000476724 IGKV6D-41A0A0C4DH26 115 aa18.45■□□□□ 0.54
TMEM53-208ENST00000476724 A0A1W2PQC6 194 aa18.45■□□□□ 0.54
TMEM53-208ENST00000476724 TADA3O75528 432 aa18.45■□□□□ 0.54
TMEM53-208ENST00000476724 PDHBP11177 359 aa18.45■□□□□ 0.54
TMEM53-208ENST00000476724 TUBB2AQ13885 445 aa18.45■□□□□ 0.54
TMEM53-208ENST00000476724 MTF1Q14872 753 aa18.45■□□□□ 0.54
TMEM53-208ENST00000476724 SHROOM1Q2M3G4 852 aaPredicted RBP18.45■□□□□ 0.54
TMEM53-208ENST00000476724 ARHGAP29Q52LW3 1261 aa18.45■□□□□ 0.54
TMEM53-208ENST00000476724 CYP26C1Q6V0L0 522 aa18.45■□□□□ 0.54
TMEM53-208ENST00000476724 ZSCAN29Q8IWY8 852 aaPredicted RBP18.45■□□□□ 0.54
TMEM53-208ENST00000476724 C7orf25Q9BPX7 421 aa18.45■□□□□ 0.54
TMEM53-208ENST00000476724 TUBB2BQ9BVA1 445 aa18.45■□□□□ 0.54
TMEM53-208ENST00000476724 CARD6Q9BX69 1037 aa18.45■□□□□ 0.54
TMEM53-208ENST00000476724 EHD4Q9H223 541 aa18.45■□□□□ 0.54
TMEM53-208ENST00000476724 MRFAP1Q9Y605 127 aa18.45■□□□□ 0.54
TMEM53-208ENST00000476724 BICDL2A1A5D9 508 aa18.44■□□□□ 0.54
TMEM53-208ENST00000476724 SPDYE2BA6NHP3 402 aa18.44■□□□□ 0.54
TMEM53-208ENST00000476724 USP17L5A8MUK1 530 aa18.44■□□□□ 0.54
TMEM53-208ENST00000476724 KIF5CO60282 957 aa18.44■□□□□ 0.54
TMEM53-208ENST00000476724 SPDYE6P0CI01 402 aa18.44■□□□□ 0.54
TMEM53-208ENST00000476724 UBXN1Q04323 297 aa18.44■□□□□ 0.54
TMEM53-208ENST00000476724 TBCKQ8TEA7 893 aa18.44■□□□□ 0.54
TMEM53-208ENST00000476724 CALML4Q96GE6 196 aa18.44■□□□□ 0.54
TMEM53-208ENST00000476724 NUP88Q99567 741 aaPredicted RBP18.44■□□□□ 0.54
TMEM53-208ENST00000476724 DHX36Q9H2U1 1008 aaKnown RBP18.44■□□□□ 0.54
TMEM53-208ENST00000476724 CPVLQ9H3G5 476 aa18.44■□□□□ 0.54
TMEM53-208ENST00000476724 MRPL44Q9H9J2 332 aaKnown RBP18.44■□□□□ 0.54
TMEM53-208ENST00000476724 VAT1LQ9HCJ6 419 aa18.44■□□□□ 0.54
TMEM53-208ENST00000476724 ABHD10Q9NUJ1 306 aa18.44■□□□□ 0.54
TMEM53-208ENST00000476724 MAGEC2Q9UBF1 373 aaPredicted RBP18.44■□□□□ 0.54
TMEM53-208ENST00000476724 MYH4Q9Y623 1939 aa18.44■□□□□ 0.54
TMEM53-208ENST00000476724 CLRN2A0PK11 232 aa18.43■□□□□ 0.54
TMEM53-208ENST00000476724 SNHG28P0DPA3 235 aa18.43■□□□□ 0.54
TMEM53-208ENST00000476724 PLCG1P19174 1290 aa18.43■□□□□ 0.54
TMEM53-208ENST00000476724 HOXA7P31268 230 aaPredicted RBP18.43■□□□□ 0.54
TMEM53-208ENST00000476724 RASSF7Q02833 373 aa18.43■□□□□ 0.54
TMEM53-208ENST00000476724 IRF2BP1Q8IU81 584 aa18.43■□□□□ 0.54
TMEM53-208ENST00000476724 LRRN4CLQ8ND94 238 aa18.43■□□□□ 0.54
TMEM53-208ENST00000476724 MAPK8IP1Q9UQF2 711 aa18.43■□□□□ 0.54
TMEM53-208ENST00000476724 SHTN1A0MZ66 631 aa18.43■□□□□ 0.54
TMEM53-208ENST00000476724 COBLO75128 1261 aa18.43■□□□□ 0.54
TMEM53-208ENST00000476724 NPM3O75607 178 aaKnown RBP18.43■□□□□ 0.54
TMEM53-208ENST00000476724 PRELPP51888 382 aa18.43■□□□□ 0.54
TMEM53-208ENST00000476724 COBLL1Q53SF7 1204 aa18.43■□□□□ 0.54
TMEM53-208ENST00000476724 LRRC47Q8N1G4 583 aaKnown RBP18.43■□□□□ 0.54
TMEM53-208ENST00000476724 TRIM9Q9C026 710 aa18.43■□□□□ 0.54
TMEM53-208ENST00000476724 FAM53CQ9NYF3 392 aa18.43■□□□□ 0.54
TMEM53-208ENST00000476724 PI4KBQ9UBF8 816 aa18.43■□□□□ 0.54
TMEM53-208ENST00000476724 LGALS16A8MUM7 142 aa18.42■□□□□ 0.54
TMEM53-208ENST00000476724 TCP10L2B9ZVM9 353 aa18.42■□□□□ 0.54
TMEM53-208ENST00000476724 PPP1R18Q6NYC8 613 aa18.42■□□□□ 0.54
TMEM53-208ENST00000476724 CREBRFQ8IUR6 639 aa18.42■□□□□ 0.54
TMEM53-208ENST00000476724 MB21D1Q8N884 522 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms