RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 A0A1W2PQJ5 194 aa8.18□□□□□ -1.1
NUP58-209ENST00000476553 ANKRD33BA6NCL7 494 aa8.18□□□□□ -1.1
NUP58-209ENST00000476553 GREM1O60565 184 aa8.18□□□□□ -1.1
NUP58-209ENST00000476553 SLPIP03973 132 aa8.18□□□□□ -1.1
NUP58-209ENST00000476553 VAMP1P23763 118 aa8.18□□□□□ -1.1
NUP58-209ENST00000476553 TACR1P25103 407 aa8.18□□□□□ -1.1
NUP58-209ENST00000476553 PMLP29590 882 aa8.18□□□□□ -1.1
NUP58-209ENST00000476553 SARSP49591 514 aaKnown RBP8.18□□□□□ -1.1
NUP58-209ENST00000476553 HMGA2P52926 109 aa8.18□□□□□ -1.1
NUP58-209ENST00000476553 NOX5Q96PH1 765 aa8.18□□□□□ -1.1
NUP58-209ENST00000476553 GLI4P10075 376 aa8.17□□□□□ -1.1
NUP58-209ENST00000476553 CRKP46108 304 aa8.17□□□□□ -1.1
NUP58-209ENST00000476553 ERMP1Q7Z2K6 904 aa8.17□□□□□ -1.1
NUP58-209ENST00000476553 NLGN2Q8NFZ4 835 aa8.17□□□□□ -1.1
NUP58-209ENST00000476553 GIPC2Q8TF65 315 aa8.17□□□□□ -1.1
NUP58-209ENST00000476553 DVL3Q92997 716 aaPredicted RBP8.17□□□□□ -1.1
NUP58-209ENST00000476553 MENTQ9BUN1 341 aa8.17□□□□□ -1.1
NUP58-209ENST00000476553 DSCC1Q9BVC3 393 aa8.17□□□□□ -1.1
NUP58-209ENST00000476553 HIRIP3Q9BW71 556 aaPredicted RBP8.17□□□□□ -1.1
NUP58-209ENST00000476553 SSBP3Q9BWW4 388 aaPredicted RBP8.17□□□□□ -1.1
NUP58-209ENST00000476553 KBTBD4Q9NVX7 518 aa8.17□□□□□ -1.1
NUP58-209ENST00000476553 H0Y8X5 98 aa8.16□□□□□ -1.1
NUP58-209ENST00000476553 C7orf61Q8IZ16 206 aa8.16□□□□□ -1.1
NUP58-209ENST00000476553 SMARCC2Q8TAQ2 1214 aa8.16□□□□□ -1.1
NUP58-209ENST00000476553 ADAMTS17Q8TE56 1095 aa8.16□□□□□ -1.1
NUP58-209ENST00000476553 CPA5Q8WXQ8 436 aa8.16□□□□□ -1.1
NUP58-209ENST00000476553 PPP1R1BQ9UD71 204 aaPredicted RBP8.16□□□□□ -1.1
NUP58-209ENST00000476553 SUPT16HQ9Y5B9 1047 aaKnown RBP8.16□□□□□ -1.1
NUP58-209ENST00000476553 GDF5P43026 501 aa8.15□□□□□ -1.1
NUP58-209ENST00000476553 NAALADL2Q58DX5 795 aa8.15□□□□□ -1.1
NUP58-209ENST00000476553 CWF19L1Q69YN2 538 aaKnown RBP8.15□□□□□ -1.1
NUP58-209ENST00000476553 DBR1Q9UK59 544 aaKnown RBP8.15□□□□□ -1.1
NUP58-209ENST00000476553 CYR61O00622 381 aa8.14□□□□□ -1.11
NUP58-209ENST00000476553 ACVRL1P37023 503 aa8.14□□□□□ -1.11
NUP58-209ENST00000476553 XPCQ01831 940 aaPredicted RBP8.14□□□□□ -1.11
NUP58-209ENST00000476553 CLCQ05315 142 aa8.14□□□□□ -1.11
NUP58-209ENST00000476553 CRIP3Q6Q6R5 217 aa8.14□□□□□ -1.11
NUP58-209ENST00000476553 REXO1Q8N1G1 1221 aaKnown RBP8.14□□□□□ -1.11
NUP58-209ENST00000476553 PSMD1Q99460 953 aa8.14□□□□□ -1.11
NUP58-209ENST00000476553 SUCOQ9UBS9 1254 aaKnown RBP8.14□□□□□ -1.11
NUP58-209ENST00000476553 C9IYK1 514 aa8.13□□□□□ -1.11
NUP58-209ENST00000476553 CDSNQ15517 529 aa8.13□□□□□ -1.11
NUP58-209ENST00000476553 ZNF326Q5BKZ1 582 aaKnown RBP8.13□□□□□ -1.11
NUP58-209ENST00000476553 PTCHD1Q96NR3 888 aa8.13□□□□□ -1.11
NUP58-209ENST00000476553 SLC9A7Q96T83 725 aa8.13□□□□□ -1.11
NUP58-209ENST00000476553 MRIQ9BWK5 157 aa8.13□□□□□ -1.11
NUP58-209ENST00000476553 BCAS3Q9H6U6 928 aa8.13□□□□□ -1.11
NUP58-209ENST00000476553 EIF4A3P38919 411 aaKnown RBP8.12□□□□□ -1.11
NUP58-209ENST00000476553 CACNB2Q08289 660 aaPredicted RBP8.12□□□□□ -1.11
NUP58-209ENST00000476553 LRRFIP1Q32MZ4 808 aaKnown RBP8.12□□□□□ -1.11
NUP58-209ENST00000476553 LINC00482Q8N8I6 264 aa8.12□□□□□ -1.11
NUP58-209ENST00000476553 COPRSQ9NQ92 184 aa8.12□□□□□ -1.11
NUP58-209ENST00000476553 L1CAMP32004 1257 aa8.11□□□□□ -1.11
NUP58-209ENST00000476553 GIMAP6Q6P9H5 292 aa8.11□□□□□ -1.11
NUP58-209ENST00000476553 TTLL7Q6ZT98 887 aa8.11□□□□□ -1.11
NUP58-209ENST00000476553 NOL8Q76FK4 1167 aaKnown RBP8.11□□□□□ -1.11
NUP58-209ENST00000476553 SPRED1Q7Z699 444 aa8.11□□□□□ -1.11
NUP58-209ENST00000476553 ZBTB8AQ96BR9 441 aa8.11□□□□□ -1.11
NUP58-209ENST00000476553 SLITRK6Q9H5Y7 841 aa8.11□□□□□ -1.11
NUP58-209ENST00000476553 TSC22D4Q9Y3Q8 395 aa8.11□□□□□ -1.11
NUP58-209ENST00000476553 SORBS3O60504 671 aa8.1□□□□□ -1.11
NUP58-209ENST00000476553 GK5Q6ZS86 529 aa8.1□□□□□ -1.11
NUP58-209ENST00000476553 FCRL3Q96P31 734 aaPredicted RBP8.1□□□□□ -1.11
NUP58-209ENST00000476553 RXFP1Q9HBX9 757 aa8.1□□□□□ -1.11
NUP58-209ENST00000476553 FBLN5Q9UBX5 448 aa8.1□□□□□ -1.11
NUP58-209ENST00000476553 ZNF445P59923 1031 aa8.09□□□□□ -1.11
NUP58-209ENST00000476553 SLC9A5Q14940 896 aa8.09□□□□□ -1.11
NUP58-209ENST00000476553 CCDC144CPQ8IYA2 1237 aa8.09□□□□□ -1.11
NUP58-209ENST00000476553 LGI4Q8N135 537 aa8.09□□□□□ -1.11
NUP58-209ENST00000476553 NETO2Q8NC67 525 aa8.09□□□□□ -1.11
NUP58-209ENST00000476553 CHST13Q8NET6 341 aa8.09□□□□□ -1.11
NUP58-209ENST00000476553 SH3RF3Q8TEJ3 882 aaPredicted RBP8.09□□□□□ -1.11
NUP58-209ENST00000476553 DHRS1Q96LJ7 313 aa8.09□□□□□ -1.11
NUP58-209ENST00000476553 INVSQ9Y283 1065 aa8.09□□□□□ -1.11
NUP58-209ENST00000476553 FHOD1Q9Y613 1164 aa8.09□□□□□ -1.11
NUP58-209ENST00000476553 TBC1D8O95759 1140 aa8.08□□□□□ -1.12
NUP58-209ENST00000476553 ACRP10323 421 aa8.08□□□□□ -1.12
NUP58-209ENST00000476553 IFNGR1P15260 489 aa8.08□□□□□ -1.12
NUP58-209ENST00000476553 RGL3Q3MIN7 710 aa8.08□□□□□ -1.12
NUP58-209ENST00000476553 SEZ6Q53EL9 994 aa8.08□□□□□ -1.12
NUP58-209ENST00000476553 ANKRD39Q53RE8 183 aa8.08□□□□□ -1.12
NUP58-209ENST00000476553 FAM26FQ5R3K3 315 aa8.08□□□□□ -1.12
NUP58-209ENST00000476553 CABP7Q86V35 215 aa8.08□□□□□ -1.12
NUP58-209ENST00000476553 ZFPM1Q8IX07 1006 aa8.08□□□□□ -1.12
NUP58-209ENST00000476553 ZNF296Q8WUU4 475 aaPredicted RBP8.08□□□□□ -1.12
NUP58-209ENST00000476553 ST6GALNAC2Q9UJ37 374 aa8.08□□□□□ -1.12
NUP58-209ENST00000476553 MARCH6O60337 910 aa8.07□□□□□ -1.12
NUP58-209ENST00000476553 RECKO95980 971 aa8.07□□□□□ -1.12
NUP58-209ENST00000476553 RPL13P26373 211 aaKnown RBP8.07□□□□□ -1.12
NUP58-209ENST00000476553 NOP2P46087 812 aaKnown RBP8.07□□□□□ -1.12
NUP58-209ENST00000476553 PMS1P54277 932 aaKnown RBP8.07□□□□□ -1.12
NUP58-209ENST00000476553 SMAD4Q13485 552 aaKnown RBP8.07□□□□□ -1.12
NUP58-209ENST00000476553 FBXO33Q7Z6M2 555 aa8.07□□□□□ -1.12
NUP58-209ENST00000476553 PPFIBP1Q86W92 1011 aa8.07□□□□□ -1.12
NUP58-209ENST00000476553 SMARCC1Q92922 1105 aaPredicted RBP8.07□□□□□ -1.12
NUP58-209ENST00000476553 PEX11GQ96HA9 241 aa8.07□□□□□ -1.12
NUP58-209ENST00000476553 GP6Q9HCN6 339 aa8.07□□□□□ -1.12
NUP58-209ENST00000476553 UBP1Q9NZI7 540 aa8.07□□□□□ -1.12
NUP58-209ENST00000476553 VTI1BQ9UEU0 232 aa8.07□□□□□ -1.12
NUP58-209ENST00000476553 THBS2P35442 1172 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms