RNA–Protein interactions for RNA: ENST00000476428.1

MAP1LC3A-204, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 5

Gene MAP1LC3A, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-204ENST00000476428 LHX8Q68G74 356 aa24.3■■□□□ 1.48
MAP1LC3A-204ENST00000476428 MCF2L2Q86YR7 1114 aa24.3■■□□□ 1.48
MAP1LC3A-204ENST00000476428 MAF1Q9H063 256 aa24.3■■□□□ 1.48
MAP1LC3A-204ENST00000476428 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.3■■□□□ 1.48
MAP1LC3A-204ENST00000476428 MKI67P46013 3256 aaKnown RBP24.3■■□□□ 1.48
MAP1LC3A-204ENST00000476428 ASB14A6NK59 587 aa24.29■■□□□ 1.48
MAP1LC3A-204ENST00000476428 OPLAHO14841 1288 aa24.29■■□□□ 1.48
MAP1LC3A-204ENST00000476428 ZNF865P0CJ78 1059 aaPredicted RBP24.29■■□□□ 1.48
MAP1LC3A-204ENST00000476428 ADD1P35611 737 aaKnown RBP24.29■■□□□ 1.48
MAP1LC3A-204ENST00000476428 FUT2Q10981 343 aa24.29■■□□□ 1.48
MAP1LC3A-204ENST00000476428 ARMCX2Q7L311 632 aa24.29■■□□□ 1.48
MAP1LC3A-204ENST00000476428 LARP6Q9BRS8 491 aaKnown RBP24.29■■□□□ 1.48
MAP1LC3A-204ENST00000476428 CNPY2Q9Y2B0 182 aa24.29■■□□□ 1.48
MAP1LC3A-204ENST00000476428 SMCHD1A6NHR9 2005 aa24.28■■□□□ 1.48
MAP1LC3A-204ENST00000476428 ZNFX1Q9P2E3 1918 aaKnown RBP24.28■■□□□ 1.48
MAP1LC3A-204ENST00000476428 hCG_1642624A0A1W2PR95 340 aa24.28■■□□□ 1.48
MAP1LC3A-204ENST00000476428 PDIA3P30101 505 aaKnown RBP24.28■■□□□ 1.48
MAP1LC3A-204ENST00000476428 PPP2R5BQ15173 497 aa24.28■■□□□ 1.48
MAP1LC3A-204ENST00000476428 SYTL5Q8TDW5 730 aaPredicted RBP24.28■■□□□ 1.48
MAP1LC3A-204ENST00000476428 ADD3Q9UEY8 706 aaKnown RBP24.28■■□□□ 1.48
MAP1LC3A-204ENST00000476428 SEC63Q9UGP8 760 aaKnown RBP24.28■■□□□ 1.48
MAP1LC3A-204ENST00000476428 DDX20Q9UHI6 824 aaKnown RBP24.28■■□□□ 1.48
MAP1LC3A-204ENST00000476428 DDX49Q9Y6V7 483 aaKnown RBP24.28■■□□□ 1.48
MAP1LC3A-204ENST00000476428 SEPT4O43236 478 aa24.27■■□□□ 1.48
MAP1LC3A-204ENST00000476428 ALDH8A1Q9H2A2 487 aaPredicted RBP24.27■■□□□ 1.48
MAP1LC3A-204ENST00000476428 OGDHLQ9ULD0 1010 aa24.27■■□□□ 1.48
MAP1LC3A-204ENST00000476428 CCDC196A0A1B0GTZ2 297 aa24.26■■□□□ 1.47
MAP1LC3A-204ENST00000476428 CFBP00751 764 aa24.26■■□□□ 1.47
MAP1LC3A-204ENST00000476428 CAPN2P17655 700 aa24.26■■□□□ 1.47
MAP1LC3A-204ENST00000476428 ALDH5A1P51649 535 aaPredicted RBP24.26■■□□□ 1.47
MAP1LC3A-204ENST00000476428 ACVR2BQ13705 512 aa24.26■■□□□ 1.47
MAP1LC3A-204ENST00000476428 MORC4Q8TE76 937 aa24.26■■□□□ 1.47
MAP1LC3A-204ENST00000476428 TAAR1Q96RJ0 339 aa24.26■■□□□ 1.47
MAP1LC3A-204ENST00000476428 ABHD16BQ9H3Z7 469 aa24.26■■□□□ 1.47
MAP1LC3A-204ENST00000476428 COL20A1Q9P218 1284 aa24.26■■□□□ 1.47
MAP1LC3A-204ENST00000476428 CNTNAP5Q8WYK1 1306 aa24.26■■□□□ 1.47
MAP1LC3A-204ENST00000476428 KIAA0100Q14667 2235 aaKnown RBP24.26■■□□□ 1.47
MAP1LC3A-204ENST00000476428 MSCO60682 206 aa24.25■■□□□ 1.47
MAP1LC3A-204ENST00000476428 HSD17B4P51659 736 aa24.25■■□□□ 1.47
MAP1LC3A-204ENST00000476428 GHRHRQ02643 423 aa24.25■■□□□ 1.47
MAP1LC3A-204ENST00000476428 ANO1Q5XXA6 986 aa24.25■■□□□ 1.47
MAP1LC3A-204ENST00000476428 DNERQ8NFT8 737 aa24.25■■□□□ 1.47
MAP1LC3A-204ENST00000476428 ZNF274Q96GC6 653 aaPredicted RBP24.25■■□□□ 1.47
MAP1LC3A-204ENST00000476428 KATNBL1Q9H079 304 aa24.25■■□□□ 1.47
MAP1LC3A-204ENST00000476428 ZHX1Q9UKY1 873 aaPredicted RBP24.25■■□□□ 1.47
MAP1LC3A-204ENST00000476428 V9GY48 417 aaPredicted RBP24.25■■□□□ 1.47
MAP1LC3A-204ENST00000476428 NID2Q14112 1375 aa24.25■■□□□ 1.47
MAP1LC3A-204ENST00000476428 CCT2P78371 535 aaKnown RBP24.24■■□□□ 1.47
MAP1LC3A-204ENST00000476428 SAMD3Q8N6K7 520 aa24.24■■□□□ 1.47
MAP1LC3A-204ENST00000476428 MAP3K20Q9NYL2 800 aaKnown RBP24.24■■□□□ 1.47
MAP1LC3A-204ENST00000476428 CENPFP49454 3210 aa24.23■■□□□ 1.47
MAP1LC3A-204ENST00000476428 LOC102724159A0A0B4J2E5 919 aa24.23■■□□□ 1.47
MAP1LC3A-204ENST00000476428 GCOM1H8Y6P7 765 aaPredicted RBP24.23■■□□□ 1.47
MAP1LC3A-204ENST00000476428 POLR2MP0CAP2 368 aa24.23■■□□□ 1.47
MAP1LC3A-204ENST00000476428 HOXA13P31271 388 aaPredicted RBP24.23■■□□□ 1.47
MAP1LC3A-204ENST00000476428 FXR1P51114 621 aaKnown RBP eCLIP24.23■■□□□ 1.47
MAP1LC3A-204ENST00000476428 PWP2Q15269 919 aaKnown RBP24.23■■□□□ 1.47
MAP1LC3A-204ENST00000476428 C22orf23Q9BZE7 217 aa24.23■■□□□ 1.47
MAP1LC3A-204ENST00000476428 NCOA5Q9HCD5 579 aaKnown RBP24.23■■□□□ 1.47
MAP1LC3A-204ENST00000476428 BAZ2BQ9UIF8 2168 aaKnown RBP24.23■■□□□ 1.47
MAP1LC3A-204ENST00000476428 AKR1A1P14550 325 aa24.22■■□□□ 1.47
MAP1LC3A-204ENST00000476428 FAM184BQ9ULE4 1060 aa24.22■■□□□ 1.47
MAP1LC3A-204ENST00000476428 FARP2O94887 1054 aaPredicted RBP24.21■■□□□ 1.47
MAP1LC3A-204ENST00000476428 EDNRBP24530 442 aa24.21■■□□□ 1.47
MAP1LC3A-204ENST00000476428 MNX1P50219 401 aaPredicted RBP24.21■■□□□ 1.47
MAP1LC3A-204ENST00000476428 NEK4P51957 841 aa24.21■■□□□ 1.47
MAP1LC3A-204ENST00000476428 AK2P54819 239 aa24.21■■□□□ 1.47
MAP1LC3A-204ENST00000476428 NTRK3Q16288 839 aa24.21■■□□□ 1.47
MAP1LC3A-204ENST00000476428 EEPD1Q7L9B9 569 aa24.21■■□□□ 1.47
MAP1LC3A-204ENST00000476428 HEATR3Q7Z4Q2 680 aa24.21■■□□□ 1.47
MAP1LC3A-204ENST00000476428 UBE2Q1Q7Z7E8 422 aa24.21■■□□□ 1.47
MAP1LC3A-204ENST00000476428 ANKLE1Q8NAG6 615 aa24.21■■□□□ 1.47
MAP1LC3A-204ENST00000476428 NSUN6Q8TEA1 469 aaKnown RBP24.21■■□□□ 1.47
MAP1LC3A-204ENST00000476428 GPKOWQ92917 476 aaPredicted RBP eCLIP24.21■■□□□ 1.47
MAP1LC3A-204ENST00000476428 RMDN3Q96TC7 470 aa24.21■■□□□ 1.47
MAP1LC3A-204ENST00000476428 PLXNA1Q9UIW2 1896 aa24.2■■□□□ 1.46
MAP1LC3A-204ENST00000476428 PDE4DQ08499 809 aa24.2■■□□□ 1.46
MAP1LC3A-204ENST00000476428 STK3Q13188 491 aa24.2■■□□□ 1.46
MAP1LC3A-204ENST00000476428 CCDC144BQ3MJ40 725 aa24.2■■□□□ 1.46
MAP1LC3A-204ENST00000476428 WWC2Q6AWC2 1192 aa24.2■■□□□ 1.46
MAP1LC3A-204ENST00000476428 FBXO16Q8IX29 292 aaPredicted RBP24.2■■□□□ 1.46
MAP1LC3A-204ENST00000476428 MPHOSPH6Q99547 160 aaKnown RBP24.2■■□□□ 1.46
MAP1LC3A-204ENST00000476428 KIF2CQ99661 725 aa24.2■■□□□ 1.46
MAP1LC3A-204ENST00000476428 PDGFCQ9NRA1 345 aa24.2■■□□□ 1.46
MAP1LC3A-204ENST00000476428 TPCN1Q9ULQ1 816 aa24.2■■□□□ 1.46
MAP1LC3A-204ENST00000476428 RBBP6Q7Z6E9 1792 aaKnown RBP24.2■■□□□ 1.46
MAP1LC3A-204ENST00000476428 B4DLN1 442 aa24.19■■□□□ 1.46
MAP1LC3A-204ENST00000476428 PRPF3O43395 683 aaKnown RBP24.19■■□□□ 1.46
MAP1LC3A-204ENST00000476428 RARBP10826 455 aa24.19■■□□□ 1.46
MAP1LC3A-204ENST00000476428 RBM25P49756 843 aaKnown RBP24.19■■□□□ 1.46
MAP1LC3A-204ENST00000476428 MRPL12P52815 198 aaKnown RBP24.19■■□□□ 1.46
MAP1LC3A-204ENST00000476428 ANKRD1Q15327 319 aa24.19■■□□□ 1.46
MAP1LC3A-204ENST00000476428 ARHGEF16Q5VV41 709 aa24.19■■□□□ 1.46
MAP1LC3A-204ENST00000476428 TAPT1Q6NXT6 567 aa24.19■■□□□ 1.46
MAP1LC3A-204ENST00000476428 DIS3LQ8TF46 1054 aaKnown RBP24.19■■□□□ 1.46
MAP1LC3A-204ENST00000476428 PHKBQ93100 1093 aa24.19■■□□□ 1.46
MAP1LC3A-204ENST00000476428 LENG1Q96BZ8 264 aaPredicted RBP24.19■■□□□ 1.46
MAP1LC3A-204ENST00000476428 VTA1Q9NP79 307 aa24.19■■□□□ 1.46
MAP1LC3A-204ENST00000476428 ADCY6O43306 1168 aa24.18■■□□□ 1.46
MAP1LC3A-204ENST00000476428 PPFIA3O75145 1194 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms