RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 ANKS1AQ92625 1134 aa18.92■□□□□ 0.62
COL1A1-205ENST00000476387 ANO2Q9NQ90 1003 aa18.92■□□□□ 0.62
COL1A1-205ENST00000476387 STXBP5LQ9Y2K9 1186 aa18.92■□□□□ 0.62
COL1A1-205ENST00000476387 ERICH2A1L162 156 aa18.91■□□□□ 0.62
COL1A1-205ENST00000476387 E7EWF7 191 aa18.91■□□□□ 0.62
COL1A1-205ENST00000476387 ARVCFO00192 962 aa18.91■□□□□ 0.62
COL1A1-205ENST00000476387 NFIBO00712 420 aa18.91■□□□□ 0.62
COL1A1-205ENST00000476387 CABYRO75952 493 aa18.91■□□□□ 0.62
COL1A1-205ENST00000476387 BAATQ14032 418 aaPredicted RBP18.91■□□□□ 0.62
COL1A1-205ENST00000476387 SART3Q15020 963 aaKnown RBP18.91■□□□□ 0.62
COL1A1-205ENST00000476387 ASPRV1Q53RT3 343 aa18.91■□□□□ 0.62
COL1A1-205ENST00000476387 TAPT1Q6NXT6 567 aa18.91■□□□□ 0.62
COL1A1-205ENST00000476387 CLEC4DQ8WXI8 215 aa18.91■□□□□ 0.62
COL1A1-205ENST00000476387 VTI1AQ96AJ9 217 aa18.91■□□□□ 0.62
COL1A1-205ENST00000476387 AP5M1Q9H0R1 490 aa18.91■□□□□ 0.62
COL1A1-205ENST00000476387 TBX21Q9UL17 535 aa18.91■□□□□ 0.62
COL1A1-205ENST00000476387 LCTP09848 1927 aa18.91■□□□□ 0.62
COL1A1-205ENST00000476387 ZEB2O60315 1214 aa18.9■□□□□ 0.62
COL1A1-205ENST00000476387 CDC45O75419 566 aa18.9■□□□□ 0.62
COL1A1-205ENST00000476387 SMPD1P17405 629 aa18.9■□□□□ 0.62
COL1A1-205ENST00000476387 ALDH5A1P51649 535 aaPredicted RBP18.9■□□□□ 0.62
COL1A1-205ENST00000476387 FPGSQ05932 587 aa18.9■□□□□ 0.62
COL1A1-205ENST00000476387 FSCN1Q16658 493 aaKnown RBP18.9■□□□□ 0.62
COL1A1-205ENST00000476387 CYB5R4Q7L1T6 521 aa18.9■□□□□ 0.62
COL1A1-205ENST00000476387 FBXO16Q8IX29 292 aaPredicted RBP18.9■□□□□ 0.62
COL1A1-205ENST00000476387 SEZ6LQ9BYH1 1024 aa18.9■□□□□ 0.62
COL1A1-205ENST00000476387 MAF1Q9H063 256 aa18.9■□□□□ 0.62
COL1A1-205ENST00000476387 LSG1Q9H089 658 aaKnown RBP18.9■□□□□ 0.62
COL1A1-205ENST00000476387 PTPDC1A2A3K4 754 aa18.89■□□□□ 0.61
COL1A1-205ENST00000476387 IFIT3O14879 490 aaKnown RBP18.89■□□□□ 0.61
COL1A1-205ENST00000476387 TIMP1P01033 207 aa18.89■□□□□ 0.61
COL1A1-205ENST00000476387 PARP1P09874 1014 aaKnown RBP18.89■□□□□ 0.61
COL1A1-205ENST00000476387 GOLGA8HP0CJ92 632 aa18.89■□□□□ 0.61
COL1A1-205ENST00000476387 SMAD3P84022 425 aaKnown RBP18.89■□□□□ 0.61
COL1A1-205ENST00000476387 BEX3Q00994 111 aa18.89■□□□□ 0.61
COL1A1-205ENST00000476387 RNF207Q6ZRF8 634 aa18.89■□□□□ 0.61
COL1A1-205ENST00000476387 EEPD1Q7L9B9 569 aa18.89■□□□□ 0.61
COL1A1-205ENST00000476387 PURBQ96QR8 312 aaKnown RBP18.89■□□□□ 0.61
COL1A1-205ENST00000476387 PDGFCQ9NRA1 345 aa18.89■□□□□ 0.61
COL1A1-205ENST00000476387 DDX49Q9Y6V7 483 aaKnown RBP18.89■□□□□ 0.61
COL1A1-205ENST00000476387 TLR3O15455 904 aaKnown RBP18.88■□□□□ 0.61
COL1A1-205ENST00000476387 DYNC1LI2O43237 492 aaPredicted RBP18.88■□□□□ 0.61
COL1A1-205ENST00000476387 SEC23AQ15436 765 aa18.88■□□□□ 0.61
COL1A1-205ENST00000476387 SLC30A10Q6XR72 485 aa18.88■□□□□ 0.61
COL1A1-205ENST00000476387 STOX1Q6ZVD7 989 aa18.88■□□□□ 0.61
COL1A1-205ENST00000476387 FAM126BQ8IXS8 530 aa18.88■□□□□ 0.61
COL1A1-205ENST00000476387 SLC43A3Q8NBI5 491 aa18.88■□□□□ 0.61
COL1A1-205ENST00000476387 RGS22Q8NE09 1264 aa18.88■□□□□ 0.61
COL1A1-205ENST00000476387 MPHOSPH6Q99547 160 aaKnown RBP18.88■□□□□ 0.61
COL1A1-205ENST00000476387 TAF6LQ9Y6J9 622 aa18.88■□□□□ 0.61
COL1A1-205ENST00000476387 DHX16O60231 1041 aaKnown RBP18.87■□□□□ 0.61
COL1A1-205ENST00000476387 EPHB4P54760 987 aa18.87■□□□□ 0.61
COL1A1-205ENST00000476387 RPS6P62753 249 aaKnown RBP18.87■□□□□ 0.61
COL1A1-205ENST00000476387 WTAPQ15007 396 aa18.87■□□□□ 0.61
COL1A1-205ENST00000476387 DUSP28Q4G0W2 176 aa18.87■□□□□ 0.61
COL1A1-205ENST00000476387 ZNF697Q5TEC3 545 aa18.87■□□□□ 0.61
COL1A1-205ENST00000476387 MFSD5Q6N075 450 aa18.87■□□□□ 0.61
COL1A1-205ENST00000476387 CXCL17Q6UXB2 119 aa18.87■□□□□ 0.61
COL1A1-205ENST00000476387 SLC17A8Q8NDX2 589 aa18.87■□□□□ 0.61
COL1A1-205ENST00000476387 DNERQ8NFT8 737 aa18.87■□□□□ 0.61
COL1A1-205ENST00000476387 RNPC3Q96LT9 517 aaKnown RBP18.87■□□□□ 0.61
COL1A1-205ENST00000476387 UBA5Q9GZZ9 404 aa18.87■□□□□ 0.61
COL1A1-205ENST00000476387 RBM47A0AV96 593 aaKnown RBP18.86■□□□□ 0.61
COL1A1-205ENST00000476387 CD4P01730 458 aa18.86■□□□□ 0.61
COL1A1-205ENST00000476387 EDNRBP24530 442 aa18.86■□□□□ 0.61
COL1A1-205ENST00000476387 CALML3P27482 149 aa18.86■□□□□ 0.61
COL1A1-205ENST00000476387 TMEM67Q5HYA8 995 aa18.86■□□□□ 0.61
COL1A1-205ENST00000476387 RNF20Q5VTR2 975 aa18.86■□□□□ 0.61
COL1A1-205ENST00000476387 CPVLQ9H3G5 476 aa18.86■□□□□ 0.61
COL1A1-205ENST00000476387 A0A0C4DFX4 3053 aa18.85■□□□□ 0.61
COL1A1-205ENST00000476387 B4DLN1 442 aa18.85■□□□□ 0.61
COL1A1-205ENST00000476387 SLC27A2O14975 620 aa18.85■□□□□ 0.61
COL1A1-205ENST00000476387 MRPL12P52815 198 aaKnown RBP18.85■□□□□ 0.61
COL1A1-205ENST00000476387 PPIGQ13427 754 aaKnown RBP eCLIP18.85■□□□□ 0.61
COL1A1-205ENST00000476387 ITGA7Q13683 1181 aa18.85■□□□□ 0.61
COL1A1-205ENST00000476387 CDC37Q16543 378 aaPredicted RBP18.85■□□□□ 0.61
COL1A1-205ENST00000476387 ERICH6BQ5W0A0 696 aa18.85■□□□□ 0.61
COL1A1-205ENST00000476387 CREB3L3Q68CJ9 461 aa18.85■□□□□ 0.61
COL1A1-205ENST00000476387 CHST3Q7LGC8 479 aa18.85■□□□□ 0.61
COL1A1-205ENST00000476387 MB21D2Q8IYB1 491 aaPredicted RBP18.85■□□□□ 0.61
COL1A1-205ENST00000476387 GUCD1Q96NT3 240 aa18.85■□□□□ 0.61
COL1A1-205ENST00000476387 WDR11Q9BZH6 1224 aa18.85■□□□□ 0.61
COL1A1-205ENST00000476387 ABCB11O95342 1321 aa18.84■□□□□ 0.61
COL1A1-205ENST00000476387 BAZ2BQ9UIF8 2168 aaKnown RBP18.84■□□□□ 0.61
COL1A1-205ENST00000476387 PDE4DQ08499 809 aa18.84■□□□□ 0.61
COL1A1-205ENST00000476387 USH1GQ495M9 461 aa18.84■□□□□ 0.61
COL1A1-205ENST00000476387 ADGRF4Q8IZF3 695 aa18.84■□□□□ 0.61
COL1A1-205ENST00000476387 TMEM199Q8N511 208 aa18.84■□□□□ 0.61
COL1A1-205ENST00000476387 PPP4R2Q9NY27 417 aa18.84■□□□□ 0.61
COL1A1-205ENST00000476387 GRIN2DO15399 1336 aa18.83■□□□□ 0.61
COL1A1-205ENST00000476387 TMEM265A0A087WTH1 108 aa18.83■□□□□ 0.6
COL1A1-205ENST00000476387 NKRFO15226 690 aaKnown RBP eCLIP18.83■□□□□ 0.6
COL1A1-205ENST00000476387 PTGS1P23219 599 aa18.83■□□□□ 0.6
COL1A1-205ENST00000476387 MCM5P33992 734 aa18.83■□□□□ 0.6
COL1A1-205ENST00000476387 CPT1AP50416 773 aa18.83■□□□□ 0.6
COL1A1-205ENST00000476387 TMEM63BQ5T3F8 832 aa18.83■□□□□ 0.6
COL1A1-205ENST00000476387 CATIPQ7Z7H3 387 aa18.83■□□□□ 0.6
COL1A1-205ENST00000476387 POLR3EQ9NVU0 708 aa18.83■□□□□ 0.6
COL1A1-205ENST00000476387 KLRF2D3W0D1 207 aa18.82■□□□□ 0.6
COL1A1-205ENST00000476387 PRC1O43663 620 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms