RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 GRIA2P42262 883 aa7.39□□□□□ -1.23
PTCD3-211ENST00000476215 SLC14A2Q15849 920 aa7.39□□□□□ -1.23
PTCD3-211ENST00000476215 GIMAP6Q6P9H5 292 aa7.39□□□□□ -1.23
PTCD3-211ENST00000476215 TOX2Q96NM4 488 aa7.39□□□□□ -1.23
PTCD3-211ENST00000476215 MCMBPQ9BTE3 642 aa7.39□□□□□ -1.23
PTCD3-211ENST00000476215 AARSD1Q9BTE6 412 aaKnown RBP7.39□□□□□ -1.23
PTCD3-211ENST00000476215 NKX2-4Q9H2Z4 354 aa7.39□□□□□ -1.23
PTCD3-211ENST00000476215 ARHGEF4Q9NR80 690 aa7.39□□□□□ -1.23
PTCD3-211ENST00000476215 AP5S1Q9NUS5 200 aa7.39□□□□□ -1.23
PTCD3-211ENST00000476215 TRAV20A0A0B4J274 112 aa7.38□□□□□ -1.23
PTCD3-211ENST00000476215 OR14I1A6ND48 311 aa7.38□□□□□ -1.23
PTCD3-211ENST00000476215 AURKAO14965 403 aa7.38□□□□□ -1.23
PTCD3-211ENST00000476215 FGF10O15520 208 aaPredicted RBP7.38□□□□□ -1.23
PTCD3-211ENST00000476215 ADCY3O60266 1144 aa7.38□□□□□ -1.23
PTCD3-211ENST00000476215 FAM153BP0C7A2 387 aa7.38□□□□□ -1.23
PTCD3-211ENST00000476215 TMEM253P0C7T8 217 aa7.38□□□□□ -1.23
PTCD3-211ENST00000476215 CFPP27918 469 aa7.38□□□□□ -1.23
PTCD3-211ENST00000476215 LAPTM5Q13571 262 aa7.38□□□□□ -1.23
PTCD3-211ENST00000476215 ANKLE2Q86XL3 938 aa7.38□□□□□ -1.23
PTCD3-211ENST00000476215 ZBTB38Q8NAP3 1195 aaPredicted RBP7.38□□□□□ -1.23
PTCD3-211ENST00000476215 THAP3Q8WTV1 239 aaPredicted RBP7.38□□□□□ -1.23
PTCD3-211ENST00000476215 GCM1Q9NP62 436 aa7.38□□□□□ -1.23
PTCD3-211ENST00000476215 CYP26B1Q9NR63 512 aa7.38□□□□□ -1.23
PTCD3-211ENST00000476215 BACE2Q9Y5Z0 518 aa7.38□□□□□ -1.23
PTCD3-211ENST00000476215 C2orf71A6NGG8 1288 aa7.37□□□□□ -1.23
PTCD3-211ENST00000476215 SNRPB2P08579 225 aaKnown RBP7.37□□□□□ -1.23
PTCD3-211ENST00000476215 KCNJ6P48051 423 aa7.37□□□□□ -1.23
PTCD3-211ENST00000476215 SCRN1Q12765 414 aa7.37□□□□□ -1.23
PTCD3-211ENST00000476215 SF1Q15637 639 aaKnown RBP7.37□□□□□ -1.23
PTCD3-211ENST00000476215 C2orf27AQ580R0 203 aa7.37□□□□□ -1.23
PTCD3-211ENST00000476215 YOD1Q5VVQ6 348 aaPredicted RBP7.37□□□□□ -1.23
PTCD3-211ENST00000476215 CYP2R1Q6VVX0 501 aa7.37□□□□□ -1.23
PTCD3-211ENST00000476215 SH3TC2Q8TF17 1288 aa7.37□□□□□ -1.23
PTCD3-211ENST00000476215 CDC6Q99741 560 aa7.37□□□□□ -1.23
PTCD3-211ENST00000476215 IER2Q9BTL4 223 aa7.37□□□□□ -1.23
PTCD3-211ENST00000476215 TNFRSF12AQ9NP84 129 aa7.37□□□□□ -1.23
PTCD3-211ENST00000476215 MRPL42Q9Y6G3 142 aaKnown RBP7.37□□□□□ -1.23
PTCD3-211ENST00000476215 PRODHO43272 600 aa7.36□□□□□ -1.23
PTCD3-211ENST00000476215 HOXC12P31275 282 aa7.36□□□□□ -1.23
PTCD3-211ENST00000476215 ECI1P42126 302 aa7.36□□□□□ -1.23
PTCD3-211ENST00000476215 SEPHS1P49903 392 aa7.36□□□□□ -1.23
PTCD3-211ENST00000476215 GALK1P51570 392 aa7.36□□□□□ -1.23
PTCD3-211ENST00000476215 DLG4P78352 724 aa7.36□□□□□ -1.23
PTCD3-211ENST00000476215 ATG14Q6ZNE5 492 aa7.36□□□□□ -1.23
PTCD3-211ENST00000476215 ZNF605Q86T29 641 aa7.36□□□□□ -1.23
PTCD3-211ENST00000476215 JAZF1Q86VZ6 243 aa7.36□□□□□ -1.23
PTCD3-211ENST00000476215 AMIGO3Q86WK7 504 aa7.36□□□□□ -1.23
PTCD3-211ENST00000476215 SIAH1Q8IUQ4 282 aa7.36□□□□□ -1.23
PTCD3-211ENST00000476215 NAT16Q8N8M0 369 aa7.36□□□□□ -1.23
PTCD3-211ENST00000476215 RNPC3Q96LT9 517 aaKnown RBP7.36□□□□□ -1.23
PTCD3-211ENST00000476215 IPO9Q96P70 1041 aaKnown RBP7.36□□□□□ -1.23
PTCD3-211ENST00000476215 TAF6LQ9Y6J9 622 aa7.36□□□□□ -1.23
PTCD3-211ENST00000476215 CAPNS1P04632 268 aa7.35□□□□□ -1.23
PTCD3-211ENST00000476215 FGFR1P11362 822 aa7.35□□□□□ -1.23
PTCD3-211ENST00000476215 PDE6BP35913 854 aa7.35□□□□□ -1.23
PTCD3-211ENST00000476215 GFRA1P56159 465 aa7.35□□□□□ -1.23
PTCD3-211ENST00000476215 KCNA10Q16322 511 aa7.35□□□□□ -1.23
PTCD3-211ENST00000476215 HLA-DQA1Q5Y7H0 255 aa7.35□□□□□ -1.23
PTCD3-211ENST00000476215 EEF1DP3Q658K8 133 aa7.35□□□□□ -1.23
PTCD3-211ENST00000476215 RCSD1Q6JBY9 416 aa7.35□□□□□ -1.23
PTCD3-211ENST00000476215 NSMFQ6X4W1 530 aa7.35□□□□□ -1.23
PTCD3-211ENST00000476215 LRRC56Q8IYG6 542 aaPredicted RBP7.35□□□□□ -1.23
PTCD3-211ENST00000476215 KCNN1Q92952 543 aa7.35□□□□□ -1.23
PTCD3-211ENST00000476215 CCDC140Q96MF4 163 aa7.35□□□□□ -1.23
PTCD3-211ENST00000476215 JMJD8Q96S16 334 aa7.35□□□□□ -1.23
PTCD3-211ENST00000476215 KANSL2Q9H9L4 492 aa7.35□□□□□ -1.23
PTCD3-211ENST00000476215 GPRC5CQ9NQ84 441 aa7.35□□□□□ -1.23
PTCD3-211ENST00000476215 SMG5Q9UPR3 1016 aaKnown RBP7.35□□□□□ -1.23
PTCD3-211ENST00000476215 TMA7Q9Y2S6 64 aaKnown RBP7.35□□□□□ -1.23
PTCD3-211ENST00000476215 PTCH2Q9Y6C5 1203 aa7.35□□□□□ -1.23
PTCD3-211ENST00000476215 TLDC2A0PJX2 215 aa7.34□□□□□ -1.23
PTCD3-211ENST00000476215 TCAF2A6NFQ2 919 aa7.34□□□□□ -1.23
PTCD3-211ENST00000476215 ABLIM1O14639 778 aa7.34□□□□□ -1.23
PTCD3-211ENST00000476215 CPP00450 1065 aa7.34□□□□□ -1.23
PTCD3-211ENST00000476215 THBDP07204 575 aa7.34□□□□□ -1.23
PTCD3-211ENST00000476215 PABPC1P11940 636 aaKnown RBP7.34□□□□□ -1.23
PTCD3-211ENST00000476215 CORO7P57737 925 aa7.34□□□□□ -1.23
PTCD3-211ENST00000476215 CBX2Q14781 532 aaPredicted RBP7.34□□□□□ -1.23
PTCD3-211ENST00000476215 KIR3DS1Q14943 382 aa7.34□□□□□ -1.23
PTCD3-211ENST00000476215 LONRF2Q1L5Z9 754 aa7.34□□□□□ -1.23
PTCD3-211ENST00000476215 PRSS53Q2L4Q9 553 aa7.34□□□□□ -1.23
PTCD3-211ENST00000476215 ADGRF1Q5T601 910 aa7.34□□□□□ -1.23
PTCD3-211ENST00000476215 FOXB2Q5VYV0 432 aa7.34□□□□□ -1.23
PTCD3-211ENST00000476215 JMYQ8N9B5 988 aa7.34□□□□□ -1.23
PTCD3-211ENST00000476215 ZSWIM2Q8NEG5 633 aa7.34□□□□□ -1.23
PTCD3-211ENST00000476215 NLGN2Q8NFZ4 835 aa7.34□□□□□ -1.23
PTCD3-211ENST00000476215 KCTD13Q8WZ19 329 aa7.34□□□□□ -1.23
PTCD3-211ENST00000476215 COPS5Q92905 334 aa7.34□□□□□ -1.23
PTCD3-211ENST00000476215 MBD1Q9UIS9 605 aaPredicted RBP7.34□□□□□ -1.23
PTCD3-211ENST00000476215 TBX22Q9Y458 520 aa7.34□□□□□ -1.23
PTCD3-211ENST00000476215 NPIPB6E9PJ23 425 aa7.33□□□□□ -1.24
PTCD3-211ENST00000476215 SCG5P05408 212 aa7.33□□□□□ -1.24
PTCD3-211ENST00000476215 LINC00310P59036 64 aa7.33□□□□□ -1.24
PTCD3-211ENST00000476215 CYP4F3Q08477 520 aa7.33□□□□□ -1.24
PTCD3-211ENST00000476215 FBLN7Q53RD9 439 aa7.33□□□□□ -1.24
PTCD3-211ENST00000476215 ZC3H12BQ5HYM0 836 aaKnown RBP7.33□□□□□ -1.24
PTCD3-211ENST00000476215 FAM209AQ5JX71 171 aa7.33□□□□□ -1.24
PTCD3-211ENST00000476215 LCNL1Q6ZST4 164 aa7.33□□□□□ -1.24
PTCD3-211ENST00000476215 TMEM145Q8NBT3 493 aa7.33□□□□□ -1.24
PTCD3-211ENST00000476215 ZSCAN18Q8TBC5 510 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms