RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 PI4KAP2A4QPH2 592 aa5.27□□□□□ -1.57
VPS13D-206ENST00000476045 SOWAHDA6NJG2 315 aa5.27□□□□□ -1.57
VPS13D-206ENST00000476045 YDJCA8MPS7 323 aa5.27□□□□□ -1.57
VPS13D-206ENST00000476045 KIAA1324LA8MWY0 1029 aaPredicted RBP5.27□□□□□ -1.57
VPS13D-206ENST00000476045 PSMD14O00487 310 aa5.27□□□□□ -1.57
VPS13D-206ENST00000476045 TCERG1O14776 1098 aaKnown RBP5.27□□□□□ -1.57
VPS13D-206ENST00000476045 FOXN1O15353 648 aa5.27□□□□□ -1.57
VPS13D-206ENST00000476045 DHX15O43143 795 aaKnown RBP5.27□□□□□ -1.57
VPS13D-206ENST00000476045 RAD17O75943 681 aa5.27□□□□□ -1.57
VPS13D-206ENST00000476045 CELF2O95319 508 aaKnown RBP5.27□□□□□ -1.57
VPS13D-206ENST00000476045 BRD1O95696 1058 aa5.27□□□□□ -1.57
VPS13D-206ENST00000476045 IGHMBP2P38935 993 aaKnown RBP5.27□□□□□ -1.57
VPS13D-206ENST00000476045 ANP32AP39687 249 aaKnown RBP5.27□□□□□ -1.57
VPS13D-206ENST00000476045 PREPP48147 710 aa5.27□□□□□ -1.57
VPS13D-206ENST00000476045 GPSM2P81274 684 aa5.27□□□□□ -1.57
VPS13D-206ENST00000476045 AAMPQ13685 434 aa5.27□□□□□ -1.57
VPS13D-206ENST00000476045 IKBKEQ14164 716 aa5.27□□□□□ -1.57
VPS13D-206ENST00000476045 TMCO4Q5TGY1 634 aa5.27□□□□□ -1.57
VPS13D-206ENST00000476045 SAPCD2Q86UD0 394 aa5.27□□□□□ -1.57
VPS13D-206ENST00000476045 FAM20CQ8IXL6 584 aa5.27□□□□□ -1.57
VPS13D-206ENST00000476045 PI4KAP1Q8N8J0 262 aa5.27□□□□□ -1.57
VPS13D-206ENST00000476045 C8orf58Q8NAV2 365 aa5.27□□□□□ -1.57
VPS13D-206ENST00000476045 SMG8Q8ND04 991 aaKnown RBP5.27□□□□□ -1.57
VPS13D-206ENST00000476045 LINS1Q8NG48 757 aa5.27□□□□□ -1.57
VPS13D-206ENST00000476045 ANKRD2Q9GZV1 360 aa5.27□□□□□ -1.57
VPS13D-206ENST00000476045 BCL11AQ9H165 835 aa5.27□□□□□ -1.57
VPS13D-206ENST00000476045 DBNDD1Q9H9R9 158 aa5.27□□□□□ -1.57
VPS13D-206ENST00000476045 BSDC1Q9NW68 430 aaPredicted RBP5.27□□□□□ -1.57
VPS13D-206ENST00000476045 SAGE1Q9NXZ1 904 aa5.27□□□□□ -1.57
VPS13D-206ENST00000476045 POLLQ9UGP5 575 aa5.27□□□□□ -1.57
VPS13D-206ENST00000476045 CNOT7Q9UIV1 285 aaKnown RBP5.27□□□□□ -1.57
VPS13D-206ENST00000476045 RBBP6Q7Z6E9 1792 aaKnown RBP5.27□□□□□ -1.57
VPS13D-206ENST00000476045 PATL2C9JE40 543 aaKnown RBP5.26□□□□□ -1.57
VPS13D-206ENST00000476045 CPNE3O75131 537 aaKnown RBP5.26□□□□□ -1.57
VPS13D-206ENST00000476045 IGLV1-40P01703 118 aa5.26□□□□□ -1.57
VPS13D-206ENST00000476045 IGKV5-2P06315 115 aa5.26□□□□□ -1.57
VPS13D-206ENST00000476045 VIL1P09327 827 aaKnown RBP5.26□□□□□ -1.57
VPS13D-206ENST00000476045 HSPA8P11142 646 aaKnown RBP5.26□□□□□ -1.57
VPS13D-206ENST00000476045 GRIA4P48058 902 aa5.26□□□□□ -1.57
VPS13D-206ENST00000476045 CD97P48960 835 aa5.26□□□□□ -1.57
VPS13D-206ENST00000476045 ARL4DP49703 201 aa5.26□□□□□ -1.57
VPS13D-206ENST00000476045 ZNF280AP59817 542 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-206ENST00000476045 GCKRQ14397 625 aa5.26□□□□□ -1.57
VPS13D-206ENST00000476045 UBE3BQ7Z3V4 1068 aa5.26□□□□□ -1.57
VPS13D-206ENST00000476045 KRT26Q7Z3Y9 468 aa5.26□□□□□ -1.57
VPS13D-206ENST00000476045 SKAP1Q86WV1 359 aa5.26□□□□□ -1.57
VPS13D-206ENST00000476045 DNAAF4Q8WXU2 420 aa5.26□□□□□ -1.57
VPS13D-206ENST00000476045 TSR2Q969E8 191 aaKnown RBP5.26□□□□□ -1.57
VPS13D-206ENST00000476045 UTP4Q969X6 686 aaKnown RBP5.26□□□□□ -1.57
VPS13D-206ENST00000476045 ZNF428Q96B54 188 aa5.26□□□□□ -1.57
VPS13D-206ENST00000476045 DCPSQ96C86 337 aaKnown RBP5.26□□□□□ -1.57
VPS13D-206ENST00000476045 DMRTB1Q96MA1 342 aa5.26□□□□□ -1.57
VPS13D-206ENST00000476045 RUSC1Q9BVN2 902 aa5.26□□□□□ -1.57
VPS13D-206ENST00000476045 COA1Q9GZY4 146 aa5.26□□□□□ -1.57
VPS13D-206ENST00000476045 GZF1Q9H116 711 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-206ENST00000476045 CLEC4MQ9H2X3 399 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-206ENST00000476045 PHAXQ9H814 394 aaKnown RBP5.26□□□□□ -1.57
VPS13D-206ENST00000476045 GGA3Q9NZ52 723 aa5.26□□□□□ -1.57
VPS13D-206ENST00000476045 LEMD3Q9Y2U8 911 aa5.26□□□□□ -1.57
VPS13D-206ENST00000476045 HTTP42858 3142 aa5.26□□□□□ -1.57
VPS13D-206ENST00000476045 A0A096LPE4 126 aa5.25□□□□□ -1.57
VPS13D-206ENST00000476045 A0A1W2PPZ6 126 aa5.25□□□□□ -1.57
VPS13D-206ENST00000476045 METTL12A8MUP2 240 aa5.25□□□□□ -1.57
VPS13D-206ENST00000476045 TRAF5O00463 557 aa5.25□□□□□ -1.57
VPS13D-206ENST00000476045 ELL2O00472 640 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-206ENST00000476045 HYAL3O43820 417 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-206ENST00000476045 ALDH1L1O75891 902 aa5.25□□□□□ -1.57
VPS13D-206ENST00000476045 DLGAP3O95886 979 aa5.25□□□□□ -1.57
VPS13D-206ENST00000476045 B3GALT4O96024 378 aa5.25□□□□□ -1.57
VPS13D-206ENST00000476045 POLR3DP05423 398 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-206ENST00000476045 CDC25BP30305 580 aa5.25□□□□□ -1.57
VPS13D-206ENST00000476045 NF2P35240 595 aa5.25□□□□□ -1.57
VPS13D-206ENST00000476045 KCNJ4P48050 445 aa5.25□□□□□ -1.57
VPS13D-206ENST00000476045 CCT4P50991 539 aaKnown RBP5.25□□□□□ -1.57
VPS13D-206ENST00000476045 MFAP1P55081 439 aaKnown RBP5.25□□□□□ -1.57
VPS13D-206ENST00000476045 HUNKP57058 714 aa5.25□□□□□ -1.57
VPS13D-206ENST00000476045 NLRP12P59046 1061 aa5.25□□□□□ -1.57
VPS13D-206ENST00000476045 ORC1Q13415 861 aa5.25□□□□□ -1.57
VPS13D-206ENST00000476045 STRIP1Q5VSL9 837 aa5.25□□□□□ -1.57
VPS13D-206ENST00000476045 ZDHHC13Q8IUH4 622 aa5.25□□□□□ -1.57
VPS13D-206ENST00000476045 APOBEC3FQ8IUX4 373 aaKnown RBP5.25□□□□□ -1.57
VPS13D-206ENST00000476045 C2orf69Q8N8R5 385 aa5.25□□□□□ -1.57
VPS13D-206ENST00000476045 TTLL11Q8NHH1 800 aa5.25□□□□□ -1.57
VPS13D-206ENST00000476045 GPR101Q96P66 508 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-206ENST00000476045 IPO9Q96P70 1041 aaKnown RBP5.25□□□□□ -1.57
VPS13D-206ENST00000476045 MPHOSPH8Q99549 860 aa5.25□□□□□ -1.57
VPS13D-206ENST00000476045 GLIS2Q9BZE0 524 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-206ENST00000476045 ZNF576Q9H609 170 aa5.25□□□□□ -1.57
VPS13D-206ENST00000476045 GREM2Q9H772 168 aa5.25□□□□□ -1.57
VPS13D-206ENST00000476045 C7orf69Q9H7B7 122 aa5.25□□□□□ -1.57
VPS13D-206ENST00000476045 LIN7BQ9HAP6 207 aa5.25□□□□□ -1.57
VPS13D-206ENST00000476045 GBA2Q9HCG7 927 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-206ENST00000476045 ABCB6Q9NP58 842 aa5.25□□□□□ -1.57
VPS13D-206ENST00000476045 HDAC9Q9UKV0 1011 aa5.25□□□□□ -1.57
VPS13D-206ENST00000476045 PPP2R3BQ9Y5P8 575 aa5.25□□□□□ -1.57
VPS13D-206ENST00000476045 CEP290O15078 2479 aa5.25□□□□□ -1.57
VPS13D-206ENST00000476045 DOCK2Q92608 1830 aa5.25□□□□□ -1.57
VPS13D-206ENST00000476045 PTPRCP08575 1304 aa5.24□□□□□ -1.57
VPS13D-206ENST00000476045 SYNGAP1Q96PV0 1343 aa5.24□□□□□ -1.57
VPS13D-206ENST00000476045 MAST2Q6P0Q8 1798 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms