RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 LCHNA4D1U4 455 aa16.63■□□□□ 0.25
FAM3A-218ENST00000475657 KCNA5P22460 613 aa16.63■□□□□ 0.25
FAM3A-218ENST00000475657 TMEM63BQ5T3F8 832 aa16.63■□□□□ 0.25
FAM3A-218ENST00000475657 PTCRAQ6ISU1 281 aaPredicted RBP16.63■□□□□ 0.25
FAM3A-218ENST00000475657 KIAA1211Q6ZU35 1233 aa16.63■□□□□ 0.25
FAM3A-218ENST00000475657 FBXO16Q8IX29 292 aaPredicted RBP16.63■□□□□ 0.25
FAM3A-218ENST00000475657 RHPN1Q8TCX5 695 aa16.63■□□□□ 0.25
FAM3A-218ENST00000475657 GDPD5Q8WTR4 605 aa16.63■□□□□ 0.25
FAM3A-218ENST00000475657 PAG1Q9NWQ8 432 aa16.63■□□□□ 0.25
FAM3A-218ENST00000475657 SUPT16HQ9Y5B9 1047 aaKnown RBP16.63■□□□□ 0.25
FAM3A-218ENST00000475657 WDFY4Q6ZS81 3184 aa16.63■□□□□ 0.25
FAM3A-218ENST00000475657 ZNF536O15090 1300 aa16.63■□□□□ 0.25
FAM3A-218ENST00000475657 SCN5AQ14524 2016 aa16.62■□□□□ 0.25
FAM3A-218ENST00000475657 LOC102724159A0A0B4J2E5 919 aa16.62■□□□□ 0.25
FAM3A-218ENST00000475657 KPNA6O60684 536 aa16.62■□□□□ 0.25
FAM3A-218ENST00000475657 BMP3P12645 472 aa16.62■□□□□ 0.25
FAM3A-218ENST00000475657 IL9P15248 144 aa16.62■□□□□ 0.25
FAM3A-218ENST00000475657 PWP2Q15269 919 aaKnown RBP16.62■□□□□ 0.25
FAM3A-218ENST00000475657 NBPF20Q3BBV1 942 aa16.62■□□□□ 0.25
FAM3A-218ENST00000475657 SLFNL1Q499Z3 407 aa16.62■□□□□ 0.25
FAM3A-218ENST00000475657 EEPD1Q7L9B9 569 aa16.62■□□□□ 0.25
FAM3A-218ENST00000475657 CLASRPQ8N2M8 674 aaKnown RBP16.62■□□□□ 0.25
FAM3A-218ENST00000475657 CHURC1Q8WUH1 139 aa16.62■□□□□ 0.25
FAM3A-218ENST00000475657 TRERF1Q96PN7 1200 aa16.62■□□□□ 0.25
FAM3A-218ENST00000475657 TGS1Q96RS0 853 aaKnown RBP16.62■□□□□ 0.25
FAM3A-218ENST00000475657 RAD9AQ99638 391 aa16.62■□□□□ 0.25
FAM3A-218ENST00000475657 GPHNQ9NQX3 736 aaPredicted RBP16.62■□□□□ 0.25
FAM3A-218ENST00000475657 CYP39A1Q9NYL5 469 aa16.62■□□□□ 0.25
FAM3A-218ENST00000475657 TET1Q8NFU7 2136 aa16.61■□□□□ 0.25
FAM3A-218ENST00000475657 STAT2P52630 851 aa16.61■□□□□ 0.25
FAM3A-218ENST00000475657 WDR5P61964 334 aaKnown RBP16.61■□□□□ 0.25
FAM3A-218ENST00000475657 BRDTQ58F21 947 aaPredicted RBP16.61■□□□□ 0.25
FAM3A-218ENST00000475657 GIMAP6Q6P9H5 292 aa16.61■□□□□ 0.25
FAM3A-218ENST00000475657 FAM160B2Q86V87 743 aa16.61■□□□□ 0.25
FAM3A-218ENST00000475657 NEK9Q8TD19 979 aa16.61■□□□□ 0.25
FAM3A-218ENST00000475657 ZBED2Q9BTP6 218 aa16.61■□□□□ 0.25
FAM3A-218ENST00000475657 MTMR4Q9NYA4 1195 aa16.61■□□□□ 0.25
FAM3A-218ENST00000475657 PRKAG3Q9UGI9 489 aa16.61■□□□□ 0.25
FAM3A-218ENST00000475657 SCN10AQ9Y5Y9 1956 aa16.6■□□□□ 0.25
FAM3A-218ENST00000475657 RBM47A0AV96 593 aaKnown RBP16.6■□□□□ 0.25
FAM3A-218ENST00000475657 PLA2G6O60733 806 aa16.6■□□□□ 0.25
FAM3A-218ENST00000475657 GJB5O95377 273 aa16.6■□□□□ 0.25
FAM3A-218ENST00000475657 PARNO95453 639 aaKnown RBP16.6■□□□□ 0.25
FAM3A-218ENST00000475657 TTLL1O95922 423 aa16.6■□□□□ 0.25
FAM3A-218ENST00000475657 MS4A1P11836 297 aa16.6■□□□□ 0.25
FAM3A-218ENST00000475657 FAM47CQ5HY64 1035 aa16.6■□□□□ 0.25
FAM3A-218ENST00000475657 SLFN13Q68D06 897 aa16.6■□□□□ 0.25
FAM3A-218ENST00000475657 CAGE1Q8TC20 777 aa16.6■□□□□ 0.25
FAM3A-218ENST00000475657 AFAP1L1Q8TED9 768 aa16.6■□□□□ 0.25
FAM3A-218ENST00000475657 STAG1Q8WVM7 1258 aa16.6■□□□□ 0.25
FAM3A-218ENST00000475657 CEP95Q96GE4 821 aa16.6■□□□□ 0.25
FAM3A-218ENST00000475657 WDR11Q9BZH6 1224 aa16.6■□□□□ 0.25
FAM3A-218ENST00000475657 ZNF287Q9HBT7 754 aa16.6■□□□□ 0.25
FAM3A-218ENST00000475657 DDX49Q9Y6V7 483 aaKnown RBP16.6■□□□□ 0.25
FAM3A-218ENST00000475657 TMEM232C9JQI7 657 aa16.59■□□□□ 0.25
FAM3A-218ENST00000475657 MYL3P08590 195 aa16.59■□□□□ 0.25
FAM3A-218ENST00000475657 IFIT2P09913 472 aaKnown RBP16.59■□□□□ 0.25
FAM3A-218ENST00000475657 ZSCAN25Q6NSZ9 544 aa16.59■□□□□ 0.25
FAM3A-218ENST00000475657 CCDC155Q8N6L0 562 aa16.59■□□□□ 0.25
FAM3A-218ENST00000475657 GMCL1Q96IK5 515 aa16.59■□□□□ 0.25
FAM3A-218ENST00000475657 MFSD14AQ96MC6 490 aa16.59■□□□□ 0.25
FAM3A-218ENST00000475657 ADD3Q9UEY8 706 aaKnown RBP16.59■□□□□ 0.25
FAM3A-218ENST00000475657 CTNNA3Q9UI47 895 aa16.59■□□□□ 0.25
FAM3A-218ENST00000475657 FAM50BQ9Y247 325 aa16.59■□□□□ 0.25
FAM3A-218ENST00000475657 COL4A4P53420 1690 aaPredicted RBP16.59■□□□□ 0.25
FAM3A-218ENST00000475657 ABHD14A-ACY1A0A1B0GW23 586 aa16.58■□□□□ 0.24
FAM3A-218ENST00000475657 LINC01553A4QN01 128 aa16.58■□□□□ 0.24
FAM3A-218ENST00000475657 C19orf67A6NJJ6 358 aa16.58■□□□□ 0.24
FAM3A-218ENST00000475657 A6NJR5 290 aa16.58■□□□□ 0.24
FAM3A-218ENST00000475657 NKRFO15226 690 aaKnown RBP eCLIP16.58■□□□□ 0.24
FAM3A-218ENST00000475657 EFCAB14O75071 495 aa16.58■□□□□ 0.24
FAM3A-218ENST00000475657 ALAS1P13196 640 aa16.58■□□□□ 0.24
FAM3A-218ENST00000475657 ATP5JP18859 108 aa16.58■□□□□ 0.24
FAM3A-218ENST00000475657 GPNMBQ14956 572 aa16.58■□□□□ 0.24
FAM3A-218ENST00000475657 CNKSR3Q6P9H4 555 aa16.58■□□□□ 0.24
FAM3A-218ENST00000475657 SIRT2Q8IXJ6 389 aa16.58■□□□□ 0.24
FAM3A-218ENST00000475657 ZNF444Q8N0Y2 327 aaPredicted RBP16.58■□□□□ 0.24
FAM3A-218ENST00000475657 KIF1BPQ96EK5 621 aa16.58■□□□□ 0.24
FAM3A-218ENST00000475657 STRBPQ96SI9 672 aaKnown RBP16.58■□□□□ 0.24
FAM3A-218ENST00000475657 HAUS7Q99871 368 aa16.58■□□□□ 0.24
FAM3A-218ENST00000475657 UPF3BQ9BZI7 483 aaKnown RBP16.58■□□□□ 0.24
FAM3A-218ENST00000475657 PUS7LQ9H0K6 701 aaKnown RBP16.58■□□□□ 0.24
FAM3A-218ENST00000475657 NOD1Q9Y239 953 aa16.58■□□□□ 0.24
FAM3A-218ENST00000475657 RAD50Q92878 1312 aa16.58■□□□□ 0.24
FAM3A-218ENST00000475657 ZDBF2Q9HCK1 2354 aa16.57■□□□□ 0.24
FAM3A-218ENST00000475657 ST18O60284 1047 aa16.57■□□□□ 0.24
FAM3A-218ENST00000475657 CXCL10P02778 98 aa16.57■□□□□ 0.24
FAM3A-218ENST00000475657 DEFB103AP81534 67 aa16.57■□□□□ 0.24
FAM3A-218ENST00000475657 ZP2Q05996 745 aa16.57■□□□□ 0.24
FAM3A-218ENST00000475657 RBL2Q08999 1139 aa16.57■□□□□ 0.24
FAM3A-218ENST00000475657 LRRC47Q8N1G4 583 aaKnown RBP16.57■□□□□ 0.24
FAM3A-218ENST00000475657 OR6J1Q8NGC5 347 aa16.57■□□□□ 0.24
FAM3A-218ENST00000475657 BOLA2Q9H3K6 86 aa16.57■□□□□ 0.24
FAM3A-218ENST00000475657 MTUS1Q9ULD2 1270 aa16.57■□□□□ 0.24
FAM3A-218ENST00000475657 TANC1Q9C0D5 1861 aa16.56■□□□□ 0.24
FAM3A-218ENST00000475657 GSG1L2A8MUP6 293 aa16.56■□□□□ 0.24
FAM3A-218ENST00000475657 CHGBP05060 677 aa16.56■□□□□ 0.24
FAM3A-218ENST00000475657 SELPP16109 830 aa16.56■□□□□ 0.24
FAM3A-218ENST00000475657 COL19A1Q14993 1142 aa16.56■□□□□ 0.24
FAM3A-218ENST00000475657 MUM1L1Q5H9M0 696 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms